RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
CDKL3-203ENST00000519312 C3P01024 1663 aa12.72□□□□□ -0.37
CDKL3-203ENST00000519312 POTEGQ6S5H5 508 aa12.71□□□□□ -0.37
CDKL3-203ENST00000519312 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
CDKL3-203ENST00000519312 CCDC18Q5T9S5 1454 aa12.71□□□□□ -0.38
CDKL3-203ENST00000519312 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.38
CDKL3-203ENST00000519312 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
CDKL3-203ENST00000519312 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
CDKL3-203ENST00000519312 TRAPPC8Q9Y2L5 1435 aa12.69□□□□□ -0.38
CDKL3-203ENST00000519312 MROH2AA6NES4 1674 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 LTBP4Q8N2S1 1624 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 NPATQ14207 1427 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 KIDINS220Q9ULH0 1771 aa12.68□□□□□ -0.38
CDKL3-203ENST00000519312 UBTFP17480 764 aaKnown RBP12.66□□□□□ -0.38
CDKL3-203ENST00000519312 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
CDKL3-203ENST00000519312 NLRP6P59044 892 aa12.65□□□□□ -0.38
CDKL3-203ENST00000519312 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
CDKL3-203ENST00000519312 MICALL2Q8IY33 904 aa12.64□□□□□ -0.39
CDKL3-203ENST00000519312 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
CDKL3-203ENST00000519312 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
CDKL3-203ENST00000519312 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
CDKL3-203ENST00000519312 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
CDKL3-203ENST00000519312 ST18O60284 1047 aa12.63□□□□□ -0.39
CDKL3-203ENST00000519312 ATP1B4Q9UN42 357 aaPredicted RBP12.63□□□□□ -0.39
CDKL3-203ENST00000519312 PLXNC1O60486 1568 aa12.63□□□□□ -0.39
CDKL3-203ENST00000519312 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
CDKL3-203ENST00000519312 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
CDKL3-203ENST00000519312 PLA2R1Q13018 1463 aa12.61□□□□□ -0.39
CDKL3-203ENST00000519312 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
CDKL3-203ENST00000519312 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
CDKL3-203ENST00000519312 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
CDKL3-203ENST00000519312 SOCS7O14512 581 aa12.6□□□□□ -0.39
CDKL3-203ENST00000519312 SNPHO15079 494 aa12.6□□□□□ -0.39
CDKL3-203ENST00000519312 PLEKHH2Q8IVE3 1493 aa12.59□□□□□ -0.39
CDKL3-203ENST00000519312 CAMSAP1Q5T5Y3 1602 aa12.59□□□□□ -0.39
CDKL3-203ENST00000519312 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
CDKL3-203ENST00000519312 GPATCH8Q9UKJ3 1502 aaKnown RBP12.59□□□□□ -0.39
CDKL3-203ENST00000519312 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
CDKL3-203ENST00000519312 ATP7AQ04656 1500 aa12.58□□□□□ -0.4
CDKL3-203ENST00000519312 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
CDKL3-203ENST00000519312 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
CDKL3-203ENST00000519312 TCOF1Q13428 1488 aaKnown RBP12.58□□□□□ -0.4
CDKL3-203ENST00000519312 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
CDKL3-203ENST00000519312 MYO3AQ8NEV4 1616 aa12.57□□□□□ -0.4
CDKL3-203ENST00000519312 A2MP01023 1474 aa12.56□□□□□ -0.4
CDKL3-203ENST00000519312 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
CDKL3-203ENST00000519312 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
CDKL3-203ENST00000519312 HS6ST3Q8IZP7 471 aa12.55□□□□□ -0.4
CDKL3-203ENST00000519312 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
CDKL3-203ENST00000519312 CEP170BQ9Y4F5 1589 aaPredicted RBP12.55□□□□□ -0.4
CDKL3-203ENST00000519312 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
CDKL3-203ENST00000519312 CLTCQ00610 1675 aaKnown RBP12.54□□□□□ -0.4
CDKL3-203ENST00000519312 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
CDKL3-203ENST00000519312 SUPT6HQ7KZ85 1726 aaKnown RBP12.53□□□□□ -0.4
CDKL3-203ENST00000519312 ADGBQ8N7X0 1667 aa12.52□□□□□ -0.4
CDKL3-203ENST00000519312 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
CDKL3-203ENST00000519312 A2ML1A8K2U0 1454 aa12.49□□□□□ -0.41
CDKL3-203ENST00000519312 MBD5Q9P267 1494 aa12.49□□□□□ -0.41
CDKL3-203ENST00000519312 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
CDKL3-203ENST00000519312 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
CDKL3-203ENST00000519312 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
CDKL3-203ENST00000519312 TIAM1Q13009 1591 aa12.48□□□□□ -0.41
CDKL3-203ENST00000519312 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
CDKL3-203ENST00000519312 HNRNPMP52272 730 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDKL3-203ENST00000519312 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
CDKL3-203ENST00000519312 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
CDKL3-203ENST00000519312 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
CDKL3-203ENST00000519312 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
CDKL3-203ENST00000519312 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
CDKL3-203ENST00000519312 PPP1R37O75864 691 aa12.46□□□□□ -0.41
CDKL3-203ENST00000519312 CPS1P31327 1500 aa12.46□□□□□ -0.42
CDKL3-203ENST00000519312 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
CDKL3-203ENST00000519312 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
CDKL3-203ENST00000519312 PZPP20742 1482 aa12.45□□□□□ -0.42
CDKL3-203ENST00000519312 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
CDKL3-203ENST00000519312 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
CDKL3-203ENST00000519312 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
CDKL3-203ENST00000519312 POLR1AO95602 1720 aaPredicted RBP12.44□□□□□ -0.42
CDKL3-203ENST00000519312 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
CDKL3-203ENST00000519312 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
CDKL3-203ENST00000519312 GGT6Q6P531 493 aa12.42□□□□□ -0.42
CDKL3-203ENST00000519312 MED14O60244 1454 aa12.41□□□□□ -0.42
CDKL3-203ENST00000519312 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
CDKL3-203ENST00000519312 NKX1-1Q15270 411 aaPredicted RBP12.41□□□□□ -0.42
CDKL3-203ENST00000519312 TNRQ92752 1358 aa12.41□□□□□ -0.42
CDKL3-203ENST00000519312 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 NLRP1Q9C000 1473 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 EMP3P54852 163 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
CDKL3-203ENST00000519312 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
CDKL3-203ENST00000519312 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
CDKL3-203ENST00000519312 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
CDKL3-203ENST00000519312 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
CDKL3-203ENST00000519312 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
CDKL3-203ENST00000519312 CAMSAP2Q08AD1 1489 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms