RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 EIF2AK4Q9P2K8 1649 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-211ENST00000518265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRGAP3-211ENST00000518265 ERBINQ96RT1 1412 aa11.68□□□□□ -0.54
SRGAP3-211ENST00000518265 NUP155O75694 1391 aa11.68□□□□□ -0.54
SRGAP3-211ENST00000518265 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-211ENST00000518265 MLECQ14165 292 aa11.67□□□□□ -0.54
SRGAP3-211ENST00000518265 GGT6Q6P531 493 aa11.67□□□□□ -0.54
SRGAP3-211ENST00000518265 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
SRGAP3-211ENST00000518265 IQGAP3Q86VI3 1631 aa11.66□□□□□ -0.54
SRGAP3-211ENST00000518265 KCNV2Q8TDN2 545 aa11.66□□□□□ -0.54
SRGAP3-211ENST00000518265 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
SRGAP3-211ENST00000518265 E9PCH4 1651 aa11.66□□□□□ -0.54
SRGAP3-211ENST00000518265 FAM135AQ9P2D6 1515 aa11.66□□□□□ -0.54
SRGAP3-211ENST00000518265 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
SRGAP3-211ENST00000518265 ATP10AO60312 1499 aa11.65□□□□□ -0.54
SRGAP3-211ENST00000518265 GSE1Q14687 1217 aa11.64□□□□□ -0.55
SRGAP3-211ENST00000518265 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-211ENST00000518265 BCORL1Q5H9F3 1711 aa11.64□□□□□ -0.55
SRGAP3-211ENST00000518265 NEUROD1Q13562 356 aa11.64□□□□□ -0.55
SRGAP3-211ENST00000518265 HRCP23327 699 aa11.63□□□□□ -0.55
SRGAP3-211ENST00000518265 NUBP1P53384 320 aa11.63□□□□□ -0.55
SRGAP3-211ENST00000518265 KDM5DQ9BY66 1539 aa11.63□□□□□ -0.55
SRGAP3-211ENST00000518265 MAGI2Q86UL8 1455 aa11.62□□□□□ -0.55
SRGAP3-211ENST00000518265 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
SRGAP3-211ENST00000518265 ARID4BQ4LE39 1312 aaPredicted RBP11.61□□□□□ -0.55
SRGAP3-211ENST00000518265 CAMSAP1Q5T5Y3 1602 aa11.61□□□□□ -0.55
SRGAP3-211ENST00000518265 TET3O43151 1660 aa11.61□□□□□ -0.55
SRGAP3-211ENST00000518265 DSG3P32926 999 aa11.61□□□□□ -0.55
SRGAP3-211ENST00000518265 SPHKAPQ2M3C7 1700 aa11.6□□□□□ -0.55
SRGAP3-211ENST00000518265 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
SRGAP3-211ENST00000518265 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
SRGAP3-211ENST00000518265 ACIN1Q9UKV3 1341 aaKnown RBP11.59□□□□□ -0.55
SRGAP3-211ENST00000518265 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
SRGAP3-211ENST00000518265 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
SRGAP3-211ENST00000518265 BCL11BQ9C0K0 894 aaPredicted RBP11.59□□□□□ -0.55
SRGAP3-211ENST00000518265 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
SRGAP3-211ENST00000518265 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
SRGAP3-211ENST00000518265 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
SRGAP3-211ENST00000518265 FER1L4A9Z1Z3 1794 aa11.58□□□□□ -0.56
SRGAP3-211ENST00000518265 ABCC3O15438 1527 aa11.57□□□□□ -0.56
SRGAP3-211ENST00000518265 MYO5BQ9ULV0 1848 aa11.57□□□□□ -0.56
SRGAP3-211ENST00000518265 KANK1Q14678 1352 aa11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 UGGT1Q9NYU2 1555 aa11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 NEUROD2Q15784 382 aa11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
SRGAP3-211ENST00000518265 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
SRGAP3-211ENST00000518265 ZC3H13Q5T200 1668 aaKnown RBP11.55□□□□□ -0.56
SRGAP3-211ENST00000518265 AGLP35573 1532 aa11.55□□□□□ -0.56
SRGAP3-211ENST00000518265 ANKRD30BQ9BXX2 1392 aa11.54□□□□□ -0.56
SRGAP3-211ENST00000518265 RIMS1Q86UR5 1692 aaKnown RBP11.54□□□□□ -0.56
SRGAP3-211ENST00000518265 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
SRGAP3-211ENST00000518265 CLTCL1P53675 1640 aa11.54□□□□□ -0.56
SRGAP3-211ENST00000518265 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
SRGAP3-211ENST00000518265 KIF1BO60333 1816 aa11.53□□□□□ -0.56
SRGAP3-211ENST00000518265 MROH2AA6NES4 1674 aa11.53□□□□□ -0.56
SRGAP3-211ENST00000518265 MADDQ8WXG6 1647 aa11.52□□□□□ -0.57
SRGAP3-211ENST00000518265 C3P01024 1663 aa11.52□□□□□ -0.57
SRGAP3-211ENST00000518265 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-211ENST00000518265 NPATQ14207 1427 aa11.51□□□□□ -0.57
SRGAP3-211ENST00000518265 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
SRGAP3-211ENST00000518265 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
SRGAP3-211ENST00000518265 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
SRGAP3-211ENST00000518265 SYNMO15061 1565 aa11.5□□□□□ -0.57
SRGAP3-211ENST00000518265 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
SRGAP3-211ENST00000518265 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-211ENST00000518265 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
SRGAP3-211ENST00000518265 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
SRGAP3-211ENST00000518265 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
SRGAP3-211ENST00000518265 TRPM2O94759 1503 aa11.47□□□□□ -0.57
SRGAP3-211ENST00000518265 WDR70Q9NW82 654 aa11.46□□□□□ -0.57
SRGAP3-211ENST00000518265 TONSLQ96HA7 1378 aa11.46□□□□□ -0.57
SRGAP3-211ENST00000518265 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.57
SRGAP3-211ENST00000518265 CCDC144AA2RUR9 1427 aa11.46□□□□□ -0.57
SRGAP3-211ENST00000518265 ZEB1P37275 1124 aaPredicted RBP11.45□□□□□ -0.58
SRGAP3-211ENST00000518265 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
SRGAP3-211ENST00000518265 ZMYM3Q14202 1370 aa11.44□□□□□ -0.58
SRGAP3-211ENST00000518265 L3MBTL2Q969R5 705 aa11.44□□□□□ -0.58
SRGAP3-211ENST00000518265 PIK3C2BO00750 1634 aa11.44□□□□□ -0.58
SRGAP3-211ENST00000518265 PTPRTO14522 1441 aa11.44□□□□□ -0.58
SRGAP3-211ENST00000518265 SGIP1Q9BQI5 828 aa11.44□□□□□ -0.58
SRGAP3-211ENST00000518265 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
SRGAP3-211ENST00000518265 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-211ENST00000518265 IFT172Q9UG01 1749 aa11.43□□□□□ -0.58
SRGAP3-211ENST00000518265 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
SRGAP3-211ENST00000518265 NOS1P29475 1434 aa11.41□□□□□ -0.58
SRGAP3-211ENST00000518265 NUTM2DQ5VT03 806 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-211ENST00000518265 PPLO60437 1756 aa11.41□□□□□ -0.58
SRGAP3-211ENST00000518265 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
SRGAP3-211ENST00000518265 UBE2Q2Q8WVN8 375 aa11.41□□□□□ -0.58
SRGAP3-211ENST00000518265 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
SRGAP3-211ENST00000518265 DCAF11Q8TEB1 546 aa11.4□□□□□ -0.58
SRGAP3-211ENST00000518265 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 IDI1Q13907 227 aa11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 PYGBP11216 843 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms