RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.8
PABPC1-204ENST00000517990 CFDP1Q9UEE9 299 aaPredicted RBP10.06□□□□□ -0.8
PABPC1-204ENST00000517990 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
PABPC1-204ENST00000517990 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
PABPC1-204ENST00000517990 TCOF1Q13428 1488 aaKnown RBP10.05□□□□□ -0.8
PABPC1-204ENST00000517990 FYCO1Q9BQS8 1478 aa10.05□□□□□ -0.8
PABPC1-204ENST00000517990 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
PABPC1-204ENST00000517990 MAP3K13O43283 966 aa10.05□□□□□ -0.8
PABPC1-204ENST00000517990 PTPRKQ15262 1439 aa10.04□□□□□ -0.8
PABPC1-204ENST00000517990 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 CPS1P31327 1500 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 PLXNC1O60486 1568 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 A2ML1A8K2U0 1454 aa10.03□□□□□ -0.8
PABPC1-204ENST00000517990 GPATCH8Q9UKJ3 1502 aaKnown RBP10.02□□□□□ -0.8
PABPC1-204ENST00000517990 INO80Q9ULG1 1556 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-204ENST00000517990 PLCG2P16885 1265 aa10.02□□□□□ -0.81
PABPC1-204ENST00000517990 MTUS2Q5JR59 1369 aa10.01□□□□□ -0.81
PABPC1-204ENST00000517990 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
PABPC1-204ENST00000517990 HSPA1LP34931 641 aa10□□□□□ -0.81
PABPC1-204ENST00000517990 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
PABPC1-204ENST00000517990 THEMISQ8N1K5 641 aaPredicted RBP10□□□□□ -0.81
PABPC1-204ENST00000517990 MED1Q15648 1581 aaPredicted RBP10□□□□□ -0.81
PABPC1-204ENST00000517990 DNMT1P26358 1616 aaKnown RBP10□□□□□ -0.81
PABPC1-204ENST00000517990 TNRQ92752 1358 aa9.99□□□□□ -0.81
PABPC1-204ENST00000517990 RTEL1-TNFRSF6BF6WH68 1400 aa9.99□□□□□ -0.81
PABPC1-204ENST00000517990 SHANK2Q9UPX8 1470 aa9.98□□□□□ -0.81
PABPC1-204ENST00000517990 FAM135AQ9P2D6 1515 aa9.98□□□□□ -0.81
PABPC1-204ENST00000517990 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
PABPC1-204ENST00000517990 KIF3BO15066 747 aa9.97□□□□□ -0.81
PABPC1-204ENST00000517990 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
PABPC1-204ENST00000517990 WASHC2CQ9Y4E1 1318 aa9.97□□□□□ -0.81
PABPC1-204ENST00000517990 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
PABPC1-204ENST00000517990 PZPP20742 1482 aa9.96□□□□□ -0.82
PABPC1-204ENST00000517990 NLRP1Q9C000 1473 aa9.96□□□□□ -0.82
PABPC1-204ENST00000517990 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.82
PABPC1-204ENST00000517990 NPHP4O75161 1426 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-204ENST00000517990 NEURL4Q96JN8 1562 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 EHBP1L1Q8N3D4 1523 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 MIA2Q96PC5 1412 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
PABPC1-204ENST00000517990 TSPY4P0CV99 314 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 TSPY10P0CW01 314 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
PABPC1-204ENST00000517990 CCDC141Q6ZP82 1450 aa9.92□□□□□ -0.82
PABPC1-204ENST00000517990 MBD5Q9P267 1494 aa9.92□□□□□ -0.82
PABPC1-204ENST00000517990 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
PABPC1-204ENST00000517990 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
PABPC1-204ENST00000517990 MED14O60244 1454 aa9.91□□□□□ -0.82
PABPC1-204ENST00000517990 ZNF644Q9H582 1327 aaPredicted RBP9.91□□□□□ -0.82
PABPC1-204ENST00000517990 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
PABPC1-204ENST00000517990 CEP162Q5TB80 1403 aa9.9□□□□□ -0.82
PABPC1-204ENST00000517990 IQGAP1P46940 1657 aa9.9□□□□□ -0.82
PABPC1-204ENST00000517990 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
PABPC1-204ENST00000517990 SYNMO15061 1565 aa9.89□□□□□ -0.83
PABPC1-204ENST00000517990 IRX5P78411 483 aaPredicted RBP9.88□□□□□ -0.83
PABPC1-204ENST00000517990 ZC3H13Q5T200 1668 aaKnown RBP9.87□□□□□ -0.83
PABPC1-204ENST00000517990 CAMSAP2Q08AD1 1489 aa9.87□□□□□ -0.83
PABPC1-204ENST00000517990 LRRC7Q96NW7 1537 aa9.87□□□□□ -0.83
PABPC1-204ENST00000517990 EID1Q9Y6B2 187 aa9.86□□□□□ -0.83
PABPC1-204ENST00000517990 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
PABPC1-204ENST00000517990 NCOA2Q15596 1464 aa9.85□□□□□ -0.83
PABPC1-204ENST00000517990 SCAF11Q99590 1463 aaKnown RBP9.84□□□□□ -0.83
PABPC1-204ENST00000517990 ABCC3O15438 1527 aa9.83□□□□□ -0.84
PABPC1-204ENST00000517990 EIF2AK4Q9P2K8 1649 aaKnown RBP9.83□□□□□ -0.84
PABPC1-204ENST00000517990 ALKQ9UM73 1620 aa9.83□□□□□ -0.84
PABPC1-204ENST00000517990 TXNDC2Q86VQ3 553 aa9.83□□□□□ -0.84
PABPC1-204ENST00000517990 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
PABPC1-204ENST00000517990 STRCP1A6NGW2 1772 aa9.81□□□□□ -0.84
PABPC1-204ENST00000517990 OCEL1Q9H607 264 aa9.81□□□□□ -0.84
PABPC1-204ENST00000517990 UBR1Q8IWV7 1749 aa9.81□□□□□ -0.84
PABPC1-204ENST00000517990 FAM135BQ49AJ0 1406 aa9.81□□□□□ -0.84
PABPC1-204ENST00000517990 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
PABPC1-204ENST00000517990 CFAP65Q6ZU64 1925 aaKnown RBP9.8□□□□□ -0.84
PABPC1-204ENST00000517990 SGIP1Q9BQI5 828 aa9.8□□□□□ -0.84
PABPC1-204ENST00000517990 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
PABPC1-204ENST00000517990 PCDHB13Q9Y5F0 798 aa9.8□□□□□ -0.84
PABPC1-204ENST00000517990 SLIT1O75093 1534 aa9.79□□□□□ -0.84
PABPC1-204ENST00000517990 KANK1Q14678 1352 aa9.78□□□□□ -0.84
PABPC1-204ENST00000517990 DUOX2Q9NRD8 1548 aa9.78□□□□□ -0.84
PABPC1-204ENST00000517990 LTKP29376 864 aa9.78□□□□□ -0.84
PABPC1-204ENST00000517990 RGS17Q9UGC6 210 aaPredicted RBP9.78□□□□□ -0.84
PABPC1-204ENST00000517990 LRRC9Q6ZRR7 1453 aa9.78□□□□□ -0.84
PABPC1-204ENST00000517990 ARHGAP23Q9P227 1491 aa9.78□□□□□ -0.84
PABPC1-204ENST00000517990 CEP152O94986 1710 aa9.77□□□□□ -0.85
PABPC1-204ENST00000517990 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.85
PABPC1-204ENST00000517990 MYOM3Q5VTT5 1437 aa9.76□□□□□ -0.85
PABPC1-204ENST00000517990 KCNA6P17658 529 aa9.76□□□□□ -0.85
PABPC1-204ENST00000517990 PROSER2Q86WR7 435 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-204ENST00000517990 TMEM2Q9UHN6 1383 aa9.75□□□□□ -0.85
PABPC1-204ENST00000517990 BCANQ96GW7 911 aa9.75□□□□□ -0.85
PABPC1-204ENST00000517990 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
PABPC1-204ENST00000517990 MSH6P52701 1360 aa9.75□□□□□ -0.85
PABPC1-204ENST00000517990 TMEM94Q12767 1356 aa9.75□□□□□ -0.85
PABPC1-204ENST00000517990 ERBINQ96RT1 1412 aa9.74□□□□□ -0.85
PABPC1-204ENST00000517990 POTEAQ6S8J7 498 aa9.74□□□□□ -0.85
PABPC1-204ENST00000517990 MROH1Q8NDA8 1641 aa9.74□□□□□ -0.85
PABPC1-204ENST00000517990 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms