RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
HERC4-215ENST00000515753 LAPTM4AQ15012 233 aa8.71□□□□□ -1.02
HERC4-215ENST00000515753 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
HERC4-215ENST00000515753 V9GY48 417 aaPredicted RBP8.71□□□□□ -1.02
HERC4-215ENST00000515753 TLL1O43897 1013 aa8.7□□□□□ -1.02
HERC4-215ENST00000515753 PLCB2Q00722 1185 aa8.7□□□□□ -1.02
HERC4-215ENST00000515753 FCHSD2O94868 740 aa8.69□□□□□ -1.02
HERC4-215ENST00000515753 GGCXP38435 758 aa8.69□□□□□ -1.02
HERC4-215ENST00000515753 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
HERC4-215ENST00000515753 CFHP08603 1231 aa8.68□□□□□ -1.02
HERC4-215ENST00000515753 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
HERC4-215ENST00000515753 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
HERC4-215ENST00000515753 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
HERC4-215ENST00000515753 SLC10A3P09131 477 aa8.67□□□□□ -1.02
HERC4-215ENST00000515753 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
HERC4-215ENST00000515753 KMT5BQ4FZB7 885 aa8.66□□□□□ -1.02
HERC4-215ENST00000515753 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
HERC4-215ENST00000515753 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
HERC4-215ENST00000515753 ACTN4O43707 911 aaKnown RBP8.65□□□□□ -1.02
HERC4-215ENST00000515753 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
HERC4-215ENST00000515753 FECHP22830 423 aa8.64□□□□□ -1.03
HERC4-215ENST00000515753 PXYLP1Q8TE99 480 aa8.64□□□□□ -1.03
HERC4-215ENST00000515753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.63□□□□□ -1.03
HERC4-215ENST00000515753 S1PR4O95977 384 aa8.63□□□□□ -1.03
HERC4-215ENST00000515753 EMID1Q96A84 441 aaPredicted RBP8.63□□□□□ -1.03
HERC4-215ENST00000515753 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
HERC4-215ENST00000515753 OATP04181 439 aa8.62□□□□□ -1.03
HERC4-215ENST00000515753 SLC19A1P41440 591 aa8.62□□□□□ -1.03
HERC4-215ENST00000515753 HIC1Q14526 733 aa8.61□□□□□ -1.03
HERC4-215ENST00000515753 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
HERC4-215ENST00000515753 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
HERC4-215ENST00000515753 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
HERC4-215ENST00000515753 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
HERC4-215ENST00000515753 GNPATO15228 680 aa8.58□□□□□ -1.04
HERC4-215ENST00000515753 NR1I2O75469 434 aa8.58□□□□□ -1.04
HERC4-215ENST00000515753 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
HERC4-215ENST00000515753 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
HERC4-215ENST00000515753 GPR37O15354 613 aa8.57□□□□□ -1.04
HERC4-215ENST00000515753 ADH1BP00325 375 aa8.57□□□□□ -1.04
HERC4-215ENST00000515753 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
HERC4-215ENST00000515753 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
HERC4-215ENST00000515753 ANKLE1Q8NAG6 615 aa8.57□□□□□ -1.04
HERC4-215ENST00000515753 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
HERC4-215ENST00000515753 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
HERC4-215ENST00000515753 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
HERC4-215ENST00000515753 HAP1P54257 671 aaPredicted RBP8.55□□□□□ -1.04
HERC4-215ENST00000515753 PLA2G2CQ5R387 149 aa8.55□□□□□ -1.04
HERC4-215ENST00000515753 RSPH4AQ5TD94 716 aa8.55□□□□□ -1.04
HERC4-215ENST00000515753 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
HERC4-215ENST00000515753 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
HERC4-215ENST00000515753 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
HERC4-215ENST00000515753 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
HERC4-215ENST00000515753 SPSB2Q99619 263 aa8.53□□□□□ -1.04
HERC4-215ENST00000515753 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
HERC4-215ENST00000515753 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
HERC4-215ENST00000515753 FUT2Q10981 343 aa8.52□□□□□ -1.05
HERC4-215ENST00000515753 PKDCCQ504Y2 493 aa8.5□□□□□ -1.05
HERC4-215ENST00000515753 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
HERC4-215ENST00000515753 MORN1Q5T089 497 aa8.49□□□□□ -1.05
HERC4-215ENST00000515753 GPIHBP1Q8IV16 184 aa8.49□□□□□ -1.05
HERC4-215ENST00000515753 GDF9O60383 454 aa8.48□□□□□ -1.05
HERC4-215ENST00000515753 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
HERC4-215ENST00000515753 FAM187AA6NFU0 413 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 GCGRP47871 477 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 PRR20EP86478 221 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 PRR20CP86479 221 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 PRR20DP86480 221 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 PRR20BP86481 221 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 PRR20AP86496 221 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 MYT1Q01538 1121 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 FOXC1Q12948 553 aa8.47□□□□□ -1.05
HERC4-215ENST00000515753 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
HERC4-215ENST00000515753 ZNF775Q96BV0 537 aaPredicted RBP8.46□□□□□ -1.06
HERC4-215ENST00000515753 THAP11Q96EK4 314 aa8.46□□□□□ -1.06
HERC4-215ENST00000515753 DGAT1O75907 488 aa8.45□□□□□ -1.06
HERC4-215ENST00000515753 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
HERC4-215ENST00000515753 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
HERC4-215ENST00000515753 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
HERC4-215ENST00000515753 POTECB2RU33 542 aa8.44□□□□□ -1.06
HERC4-215ENST00000515753 FMNL1O95466 1100 aaPredicted RBP8.44□□□□□ -1.06
HERC4-215ENST00000515753 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
HERC4-215ENST00000515753 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
HERC4-215ENST00000515753 RNF19BQ6ZMZ0 732 aa8.42□□□□□ -1.06
HERC4-215ENST00000515753 ST8SIA5O15466 376 aa8.41□□□□□ -1.06
HERC4-215ENST00000515753 BRICD5Q6PL45 260 aa8.41□□□□□ -1.06
HERC4-215ENST00000515753 RPIAP49247 311 aa8.39□□□□□ -1.07
HERC4-215ENST00000515753 CD2BP2O95400 341 aaKnown RBP8.38□□□□□ -1.07
HERC4-215ENST00000515753 CD46P15529 392 aa8.37□□□□□ -1.07
HERC4-215ENST00000515753 MDM2Q00987 491 aaPredicted RBP8.37□□□□□ -1.07
HERC4-215ENST00000515753 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
HERC4-215ENST00000515753 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
HERC4-215ENST00000515753 HLA-CQ95604 372 aa8.37□□□□□ -1.07
HERC4-215ENST00000515753 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
HERC4-215ENST00000515753 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
HERC4-215ENST00000515753 IRF6O14896 467 aa8.36□□□□□ -1.07
HERC4-215ENST00000515753 ZBTB24O43167 697 aaPredicted RBP8.35□□□□□ -1.07
HERC4-215ENST00000515753 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
HERC4-215ENST00000515753 MSS51Q4VC12 460 aa8.35□□□□□ -1.07
HERC4-215ENST00000515753 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms