RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
NEDD4-211ENST00000514893 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
NEDD4-211ENST00000514893 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
NEDD4-211ENST00000514893 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
NEDD4-211ENST00000514893 ADGRG1Q9Y653 693 aa11.69□□□□□ -0.54
NEDD4-211ENST00000514893 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
NEDD4-211ENST00000514893 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
NEDD4-211ENST00000514893 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
NEDD4-211ENST00000514893 LCE2BO14633 110 aa11.66□□□□□ -0.54
NEDD4-211ENST00000514893 ACTN4O43707 911 aaKnown RBP11.66□□□□□ -0.54
NEDD4-211ENST00000514893 FCHSD2O94868 740 aa11.66□□□□□ -0.54
NEDD4-211ENST00000514893 SLC19A1P41440 591 aa11.65□□□□□ -0.54
NEDD4-211ENST00000514893 RNF223E7ERA6 249 aa11.64□□□□□ -0.55
NEDD4-211ENST00000514893 OATP04181 439 aa11.64□□□□□ -0.55
NEDD4-211ENST00000514893 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
NEDD4-211ENST00000514893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
NEDD4-211ENST00000514893 NR1I2O75469 434 aa11.61□□□□□ -0.55
NEDD4-211ENST00000514893 CFHP08603 1231 aa11.6□□□□□ -0.55
NEDD4-211ENST00000514893 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
NEDD4-211ENST00000514893 ZNF787Q6DD87 383 aa11.6□□□□□ -0.55
NEDD4-211ENST00000514893 ANKLE1Q8NAG6 615 aa11.6□□□□□ -0.55
NEDD4-211ENST00000514893 SEMA3EO15041 775 aa11.57□□□□□ -0.56
NEDD4-211ENST00000514893 SPRYD7Q5W111 196 aa11.57□□□□□ -0.56
NEDD4-211ENST00000514893 ZNF598Q86UK7 904 aaKnown RBP11.57□□□□□ -0.56
NEDD4-211ENST00000514893 SLC10A3P09131 477 aa11.56□□□□□ -0.56
NEDD4-211ENST00000514893 SMYD5Q6GMV2 418 aa11.56□□□□□ -0.56
NEDD4-211ENST00000514893 TLL1O43897 1013 aa11.55□□□□□ -0.56
NEDD4-211ENST00000514893 HIC1Q14526 733 aa11.55□□□□□ -0.56
NEDD4-211ENST00000514893 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
NEDD4-211ENST00000514893 S1PR4O95977 384 aa11.54□□□□□ -0.56
NEDD4-211ENST00000514893 ADH1BP00325 375 aa11.54□□□□□ -0.56
NEDD4-211ENST00000514893 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
NEDD4-211ENST00000514893 DGAT1O75907 488 aa11.53□□□□□ -0.56
NEDD4-211ENST00000514893 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
NEDD4-211ENST00000514893 SCUBE3Q8IX30 993 aa11.53□□□□□ -0.56
NEDD4-211ENST00000514893 PRR20EP86478 221 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 PRR20CP86479 221 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 PRR20DP86480 221 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 PRR20BP86481 221 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 PRR20AP86496 221 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.57
NEDD4-211ENST00000514893 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
NEDD4-211ENST00000514893 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
NEDD4-211ENST00000514893 ZNF697Q5TEC3 545 aa11.49□□□□□ -0.57
NEDD4-211ENST00000514893 METTL3Q86U44 580 aaKnown RBP11.49□□□□□ -0.57
NEDD4-211ENST00000514893 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
NEDD4-211ENST00000514893 SPSB2Q99619 263 aa11.47□□□□□ -0.57
NEDD4-211ENST00000514893 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
NEDD4-211ENST00000514893 GNPATO15228 680 aa11.46□□□□□ -0.57
NEDD4-211ENST00000514893 MYT1Q01538 1121 aa11.45□□□□□ -0.58
NEDD4-211ENST00000514893 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
NEDD4-211ENST00000514893 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
NEDD4-211ENST00000514893 GDF9O60383 454 aa11.43□□□□□ -0.58
NEDD4-211ENST00000514893 RDH13Q8NBN7 331 aa11.43□□□□□ -0.58
NEDD4-211ENST00000514893 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
NEDD4-211ENST00000514893 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
NEDD4-211ENST00000514893 ZNF775Q96BV0 537 aaPredicted RBP11.41□□□□□ -0.58
NEDD4-211ENST00000514893 TNFRSF10AO00220 468 aa11.4□□□□□ -0.58
NEDD4-211ENST00000514893 CD2BP2O95400 341 aaKnown RBP11.4□□□□□ -0.58
NEDD4-211ENST00000514893 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
NEDD4-211ENST00000514893 SULF1Q8IWU6 871 aa11.4□□□□□ -0.58
NEDD4-211ENST00000514893 DDX11L8A8MPP1 907 aa11.39□□□□□ -0.59
NEDD4-211ENST00000514893 RPIAP49247 311 aa11.39□□□□□ -0.59
NEDD4-211ENST00000514893 MORN1Q5T089 497 aa11.39□□□□□ -0.59
NEDD4-211ENST00000514893 FMNL1O95466 1100 aaPredicted RBP11.38□□□□□ -0.59
NEDD4-211ENST00000514893 FECHP22830 423 aa11.38□□□□□ -0.59
NEDD4-211ENST00000514893 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
NEDD4-211ENST00000514893 GCGRP47871 477 aa11.36□□□□□ -0.59
NEDD4-211ENST00000514893 FUT2Q10981 343 aa11.36□□□□□ -0.59
NEDD4-211ENST00000514893 SALL2Q9Y467 1007 aaPredicted RBP11.36□□□□□ -0.59
NEDD4-211ENST00000514893 FOXC1Q12948 553 aa11.35□□□□□ -0.59
NEDD4-211ENST00000514893 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
NEDD4-211ENST00000514893 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
NEDD4-211ENST00000514893 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
NEDD4-211ENST00000514893 PKD2L1Q9P0L9 805 aa11.33□□□□□ -0.6
NEDD4-211ENST00000514893 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
NEDD4-211ENST00000514893 GPR37O15354 613 aa11.31□□□□□ -0.6
NEDD4-211ENST00000514893 FAM160A2Q8N612 972 aaPredicted RBP11.31□□□□□ -0.6
NEDD4-211ENST00000514893 FCF1Q9Y324 198 aaKnown RBP11.31□□□□□ -0.6
NEDD4-211ENST00000514893 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
NEDD4-211ENST00000514893 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
NEDD4-211ENST00000514893 POTECB2RU33 542 aa11.29□□□□□ -0.6
NEDD4-211ENST00000514893 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
NEDD4-211ENST00000514893 CYP4X1Q8N118 509 aa11.29□□□□□ -0.6
NEDD4-211ENST00000514893 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
NEDD4-211ENST00000514893 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
NEDD4-211ENST00000514893 Q3C1V9 767 aa11.27□□□□□ -0.61
NEDD4-211ENST00000514893 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
NEDD4-211ENST00000514893 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
NEDD4-211ENST00000514893 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
NEDD4-211ENST00000514893 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
NEDD4-211ENST00000514893 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
NEDD4-211ENST00000514893 AVPP01185 164 aa11.23□□□□□ -0.61
NEDD4-211ENST00000514893 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
NEDD4-211ENST00000514893 TTC24A2A3L6 582 aaPredicted RBP11.21□□□□□ -0.61
NEDD4-211ENST00000514893 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
NEDD4-211ENST00000514893 AXIN1O15169 862 aa11.21□□□□□ -0.61
NEDD4-211ENST00000514893 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
NEDD4-211ENST00000514893 PRDM9Q9NQV7 894 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms