RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 SPATA31D1Q6ZQQ2 1576 aa17.99■□□□□ 0.47
PVT1-203ENST00000513868 MLECQ14165 292 aa17.98■□□□□ 0.47
PVT1-203ENST00000513868 FBXO31Q5XUX0 539 aaPredicted RBP17.98■□□□□ 0.47
PVT1-203ENST00000513868 ADGRF5Q8IZF2 1346 aa17.97■□□□□ 0.47
PVT1-203ENST00000513868 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
PVT1-203ENST00000513868 IDI1Q13907 227 aa17.97■□□□□ 0.47
PVT1-203ENST00000513868 SLC52A1Q9NWF4 448 aa17.96■□□□□ 0.47
PVT1-203ENST00000513868 CHGAP10645 457 aaKnown RBP17.96■□□□□ 0.47
PVT1-203ENST00000513868 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
PVT1-203ENST00000513868 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
PVT1-203ENST00000513868 PIK3C2GO75747 1445 aa17.93■□□□□ 0.46
PVT1-203ENST00000513868 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
PVT1-203ENST00000513868 SETBP1Q9Y6X0 1596 aa17.91■□□□□ 0.46
PVT1-203ENST00000513868 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
PVT1-203ENST00000513868 CFAP70Q5T0N1 1121 aa17.9■□□□□ 0.46
PVT1-203ENST00000513868 TESK2Q96S53 571 aa17.9■□□□□ 0.46
PVT1-203ENST00000513868 ZFYVE9O95405 1425 aa17.88■□□□□ 0.45
PVT1-203ENST00000513868 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
PVT1-203ENST00000513868 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
PVT1-203ENST00000513868 ANP32CO43423 234 aa17.87■□□□□ 0.45
PVT1-203ENST00000513868 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
PVT1-203ENST00000513868 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
PVT1-203ENST00000513868 C3P01024 1663 aa17.85■□□□□ 0.45
PVT1-203ENST00000513868 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
PVT1-203ENST00000513868 A2ML1A8K2U0 1454 aa17.84■□□□□ 0.45
PVT1-203ENST00000513868 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
PVT1-203ENST00000513868 DISP3Q9P2K9 1392 aa17.84■□□□□ 0.45
PVT1-203ENST00000513868 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.45
PVT1-203ENST00000513868 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
PVT1-203ENST00000513868 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
PVT1-203ENST00000513868 CCER2I3L3R5 266 aa17.8■□□□□ 0.44
PVT1-203ENST00000513868 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
PVT1-203ENST00000513868 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
PVT1-203ENST00000513868 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
PVT1-203ENST00000513868 ASXL1Q8IXJ9 1541 aa17.79■□□□□ 0.44
PVT1-203ENST00000513868 TNRQ92752 1358 aa17.79■□□□□ 0.44
PVT1-203ENST00000513868 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
PVT1-203ENST00000513868 TMF1P82094 1093 aa17.77■□□□□ 0.44
PVT1-203ENST00000513868 SETD1AO15047 1707 aaKnown RBP17.77■□□□□ 0.44
PVT1-203ENST00000513868 QRICH2Q9H0J4 1663 aa17.77■□□□□ 0.44
PVT1-203ENST00000513868 TMEM132EQ6IEE7 984 aa17.76■□□□□ 0.43
PVT1-203ENST00000513868 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
PVT1-203ENST00000513868 MYOM1P52179 1685 aa17.75■□□□□ 0.43
PVT1-203ENST00000513868 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
PVT1-203ENST00000513868 ALKQ9UM73 1620 aa17.75■□□□□ 0.43
PVT1-203ENST00000513868 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
PVT1-203ENST00000513868 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
PVT1-203ENST00000513868 CEBPAP49715 358 aaPredicted RBP17.74■□□□□ 0.43
PVT1-203ENST00000513868 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
PVT1-203ENST00000513868 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
PVT1-203ENST00000513868 NLRP1Q9C000 1473 aa17.71■□□□□ 0.43
PVT1-203ENST00000513868 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
PVT1-203ENST00000513868 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.43
PVT1-203ENST00000513868 PTPRMP28827 1452 aa17.7■□□□□ 0.42
PVT1-203ENST00000513868 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
PVT1-203ENST00000513868 PER1O15534 1290 aaPredicted RBP17.69■□□□□ 0.42
PVT1-203ENST00000513868 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
PVT1-203ENST00000513868 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
PVT1-203ENST00000513868 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
PVT1-203ENST00000513868 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
PVT1-203ENST00000513868 CDCA8Q53HL2 280 aa17.67■□□□□ 0.42
PVT1-203ENST00000513868 TMEM2Q9UHN6 1383 aa17.67■□□□□ 0.42
PVT1-203ENST00000513868 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
PVT1-203ENST00000513868 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
PVT1-203ENST00000513868 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.42
PVT1-203ENST00000513868 PANK3Q9H999 370 aa17.64■□□□□ 0.42
PVT1-203ENST00000513868 SLIT1O75093 1534 aa17.62■□□□□ 0.41
PVT1-203ENST00000513868 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
PVT1-203ENST00000513868 ARHGAP23Q9P227 1491 aa17.61■□□□□ 0.41
PVT1-203ENST00000513868 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
PVT1-203ENST00000513868 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
PVT1-203ENST00000513868 STK26Q9P289 416 aa17.61■□□□□ 0.41
PVT1-203ENST00000513868 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
PVT1-203ENST00000513868 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
PVT1-203ENST00000513868 SETD1BQ9UPS6 1966 aaKnown RBP17.6■□□□□ 0.41
PVT1-203ENST00000513868 PLPPR3Q6T4P5 718 aa17.59■□□□□ 0.41
PVT1-203ENST00000513868 LTKP29376 864 aa17.58■□□□□ 0.41
PVT1-203ENST00000513868 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.41
PVT1-203ENST00000513868 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.41
PVT1-203ENST00000513868 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.4
PVT1-203ENST00000513868 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
PVT1-203ENST00000513868 METP08581 1390 aa17.58■□□□□ 0.4
PVT1-203ENST00000513868 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
PVT1-203ENST00000513868 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
PVT1-203ENST00000513868 RALBP1Q15311 655 aa17.57■□□□□ 0.4
PVT1-203ENST00000513868 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
PVT1-203ENST00000513868 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
PVT1-203ENST00000513868 MED14O60244 1454 aa17.55■□□□□ 0.4
PVT1-203ENST00000513868 PUS7Q96PZ0 661 aaKnown RBP17.55■□□□□ 0.4
PVT1-203ENST00000513868 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
PVT1-203ENST00000513868 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
PVT1-203ENST00000513868 SAFB2Q14151 953 aaKnown RBP eCLIP17.54■□□□□ 0.4
PVT1-203ENST00000513868 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
PVT1-203ENST00000513868 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
PVT1-203ENST00000513868 TXNDC2Q86VQ3 553 aa17.53■□□□□ 0.4
PVT1-203ENST00000513868 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
PVT1-203ENST00000513868 TECPR2O15040 1411 aa17.52■□□□□ 0.4
PVT1-203ENST00000513868 THEMISQ8N1K5 641 aaPredicted RBP17.52■□□□□ 0.4
PVT1-203ENST00000513868 CPS1P31327 1500 aa17.52■□□□□ 0.4
PVT1-203ENST00000513868 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms