RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 MAP3K13O43283 966 aa14.12□□□□□ -0.15
TPM3-221ENST00000513769 UNC13BO14795 1591 aa14.12□□□□□ -0.15
TPM3-221ENST00000513769 A2MP01023 1474 aa14.12□□□□□ -0.15
TPM3-221ENST00000513769 FBXO41Q8TF61 875 aa14.11□□□□□ -0.15
TPM3-221ENST00000513769 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
TPM3-221ENST00000513769 KIDINS220Q9ULH0 1771 aa14.11□□□□□ -0.15
TPM3-221ENST00000513769 ATP10AO60312 1499 aa14.11□□□□□ -0.15
TPM3-221ENST00000513769 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
TPM3-221ENST00000513769 EIF2AK4Q9P2K8 1649 aaKnown RBP14.1□□□□□ -0.15
TPM3-221ENST00000513769 ARID4BQ4LE39 1312 aaPredicted RBP14.1□□□□□ -0.15
TPM3-221ENST00000513769 ASTLQ6HA08 431 aaPredicted RBP14.09□□□□□ -0.15
TPM3-221ENST00000513769 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
TPM3-221ENST00000513769 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
TPM3-221ENST00000513769 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.15
TPM3-221ENST00000513769 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
TPM3-221ENST00000513769 PTPRMP28827 1452 aa14.06□□□□□ -0.16
TPM3-221ENST00000513769 RICTORQ6R327 1708 aa14.05□□□□□ -0.16
TPM3-221ENST00000513769 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
TPM3-221ENST00000513769 ZMYM4Q5VZL5 1548 aa14.05□□□□□ -0.16
TPM3-221ENST00000513769 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
TPM3-221ENST00000513769 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
TPM3-221ENST00000513769 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
TPM3-221ENST00000513769 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
TPM3-221ENST00000513769 LMTK2Q8IWU2 1503 aa14.02□□□□□ -0.16
TPM3-221ENST00000513769 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
TPM3-221ENST00000513769 PTPRTO14522 1441 aa14.02□□□□□ -0.16
TPM3-221ENST00000513769 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.17
TPM3-221ENST00000513769 GGT6Q6P531 493 aa14.01□□□□□ -0.17
TPM3-221ENST00000513769 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
TPM3-221ENST00000513769 ADAMTSL3P82987 1691 aa14.01□□□□□ -0.17
TPM3-221ENST00000513769 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
TPM3-221ENST00000513769 DCAF8Q5TAQ9 597 aa14□□□□□ -0.17
TPM3-221ENST00000513769 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
TPM3-221ENST00000513769 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
TPM3-221ENST00000513769 REREQ9P2R6 1566 aa13.99□□□□□ -0.17
TPM3-221ENST00000513769 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
TPM3-221ENST00000513769 RNF17Q9BXT8 1623 aaKnown RBP13.98□□□□□ -0.17
TPM3-221ENST00000513769 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
TPM3-221ENST00000513769 AGLP35573 1532 aa13.98□□□□□ -0.17
TPM3-221ENST00000513769 TET3O43151 1660 aa13.98□□□□□ -0.17
TPM3-221ENST00000513769 TIE1P35590 1138 aa13.97□□□□□ -0.17
TPM3-221ENST00000513769 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
TPM3-221ENST00000513769 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
TPM3-221ENST00000513769 ARHGAP31Q2M1Z3 1444 aa13.97□□□□□ -0.17
TPM3-221ENST00000513769 UHRF1BP1Q6BDS2 1440 aa13.97□□□□□ -0.17
TPM3-221ENST00000513769 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.17
TPM3-221ENST00000513769 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
TPM3-221ENST00000513769 YEATS2Q9ULM3 1422 aa13.96□□□□□ -0.18
TPM3-221ENST00000513769 EIF4G2P78344 907 aaKnown RBP eCLIP13.95□□□□□ -0.18
TPM3-221ENST00000513769 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
TPM3-221ENST00000513769 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
TPM3-221ENST00000513769 FRMPD1Q5SYB0 1578 aa13.95□□□□□ -0.18
TPM3-221ENST00000513769 ABCA6Q8N139 1617 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 MADDQ8WXG6 1647 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 HSPA2P54652 639 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 IFNL1Q8IU54 200 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
TPM3-221ENST00000513769 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
TPM3-221ENST00000513769 C7P10643 843 aa13.93□□□□□ -0.18
TPM3-221ENST00000513769 NBPF8Q3BBV2 869 aa13.93□□□□□ -0.18
TPM3-221ENST00000513769 RPGRIP1LQ68CZ1 1315 aa13.92□□□□□ -0.18
TPM3-221ENST00000513769 PYGBP11216 843 aa13.92□□□□□ -0.18
TPM3-221ENST00000513769 LMTK3Q96Q04 1460 aa13.92□□□□□ -0.18
TPM3-221ENST00000513769 E9PCH4 1651 aa13.91□□□□□ -0.18
TPM3-221ENST00000513769 TTLL13PA6NNM8 815 aa13.91□□□□□ -0.18
TPM3-221ENST00000513769 MLECQ14165 292 aa13.91□□□□□ -0.18
TPM3-221ENST00000513769 CNTLNQ9NXG0 1405 aa13.9□□□□□ -0.18
TPM3-221ENST00000513769 TRPM2O94759 1503 aa13.9□□□□□ -0.18
TPM3-221ENST00000513769 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
TPM3-221ENST00000513769 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
TPM3-221ENST00000513769 RIMS1Q86UR5 1692 aaKnown RBP13.89□□□□□ -0.19
TPM3-221ENST00000513769 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
TPM3-221ENST00000513769 SPATA31E1Q6ZUB1 1445 aa13.89□□□□□ -0.19
TPM3-221ENST00000513769 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
TPM3-221ENST00000513769 ESF1Q9H501 851 aaKnown RBP13.88□□□□□ -0.19
TPM3-221ENST00000513769 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
TPM3-221ENST00000513769 ARHGEF40Q8TER5 1519 aa13.88□□□□□ -0.19
TPM3-221ENST00000513769 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
TPM3-221ENST00000513769 ABCC3O15438 1527 aa13.87□□□□□ -0.19
TPM3-221ENST00000513769 GSE1Q14687 1217 aa13.87□□□□□ -0.19
TPM3-221ENST00000513769 NOS1P29475 1434 aa13.87□□□□□ -0.19
TPM3-221ENST00000513769 NPATQ14207 1427 aa13.87□□□□□ -0.19
TPM3-221ENST00000513769 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
TPM3-221ENST00000513769 SPHKAPQ2M3C7 1700 aa13.85□□□□□ -0.19
TPM3-221ENST00000513769 OTUD5Q96G74 571 aa13.84□□□□□ -0.19
TPM3-221ENST00000513769 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
TPM3-221ENST00000513769 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.2
TPM3-221ENST00000513769 SPOCK2Q92563 424 aa13.83□□□□□ -0.2
TPM3-221ENST00000513769 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
TPM3-221ENST00000513769 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
TPM3-221ENST00000513769 PRAG1Q86YV5 1406 aa13.82□□□□□ -0.2
TPM3-221ENST00000513769 IDI1Q13907 227 aa13.82□□□□□ -0.2
TPM3-221ENST00000513769 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
TPM3-221ENST00000513769 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
TPM3-221ENST00000513769 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
TPM3-221ENST00000513769 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
TPM3-221ENST00000513769 PCDHB8Q9UN66 801 aa13.8□□□□□ -0.2
TPM3-221ENST00000513769 CEP152O94986 1710 aa13.8□□□□□ -0.2
TPM3-221ENST00000513769 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms