RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
TRIO-220ENST00000512979 ARHGEF5Q12774 1597 aa14.82□□□□□ -0.04
TRIO-220ENST00000512979 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
TRIO-220ENST00000512979 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
TRIO-220ENST00000512979 MYOM3Q5VTT5 1437 aa14.79□□□□□ -0.04
TRIO-220ENST00000512979 MYO3AQ8NEV4 1616 aa14.79□□□□□ -0.04
TRIO-220ENST00000512979 MIA2Q96PC5 1412 aa14.78□□□□□ -0.04
TRIO-220ENST00000512979 NCKAP5LQ9HCH0 1330 aa14.78□□□□□ -0.04
TRIO-220ENST00000512979 CEP170BQ9Y4F5 1589 aaPredicted RBP14.77□□□□□ -0.04
TRIO-220ENST00000512979 WASHC2CQ9Y4E1 1318 aa14.77□□□□□ -0.04
TRIO-220ENST00000512979 KDM5DQ9BY66 1539 aa14.76□□□□□ -0.05
TRIO-220ENST00000512979 ZNF142P52746 1687 aaPredicted RBP14.76□□□□□ -0.05
TRIO-220ENST00000512979 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
TRIO-220ENST00000512979 FBXO31Q5XUX0 539 aaPredicted RBP14.75□□□□□ -0.05
TRIO-220ENST00000512979 PLA2R1Q13018 1463 aa14.75□□□□□ -0.05
TRIO-220ENST00000512979 TNRQ92752 1358 aa14.74□□□□□ -0.05
TRIO-220ENST00000512979 MAST1Q9Y2H9 1570 aa14.74□□□□□ -0.05
TRIO-220ENST00000512979 A2ML1A8K2U0 1454 aa14.74□□□□□ -0.05
TRIO-220ENST00000512979 PZPP20742 1482 aa14.74□□□□□ -0.05
TRIO-220ENST00000512979 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
TRIO-220ENST00000512979 LTBP4Q8N2S1 1624 aa14.72□□□□□ -0.05
TRIO-220ENST00000512979 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
TRIO-220ENST00000512979 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
TRIO-220ENST00000512979 DNMT1P26358 1616 aaKnown RBP14.7□□□□□ -0.06
TRIO-220ENST00000512979 ZNF335Q9H4Z2 1342 aaPredicted RBP14.69□□□□□ -0.06
TRIO-220ENST00000512979 RNF17Q9BXT8 1623 aaKnown RBP14.69□□□□□ -0.06
TRIO-220ENST00000512979 ABCC5O15440 1437 aa14.68□□□□□ -0.06
TRIO-220ENST00000512979 ABCC3O15438 1527 aa14.68□□□□□ -0.06
TRIO-220ENST00000512979 PTPN23Q9H3S7 1636 aa14.68□□□□□ -0.06
TRIO-220ENST00000512979 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
TRIO-220ENST00000512979 KIF15Q9NS87 1388 aa14.68□□□□□ -0.06
TRIO-220ENST00000512979 DUOX2Q9NRD8 1548 aa14.67□□□□□ -0.06
TRIO-220ENST00000512979 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
TRIO-220ENST00000512979 SHANK2Q9UPX8 1470 aa14.67□□□□□ -0.06
TRIO-220ENST00000512979 FGD6Q6ZV73 1430 aa14.66□□□□□ -0.06
TRIO-220ENST00000512979 IQSEC2Q5JU85 1478 aa14.66□□□□□ -0.06
TRIO-220ENST00000512979 CADPS2Q86UW7 1296 aa14.66□□□□□ -0.06
TRIO-220ENST00000512979 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
TRIO-220ENST00000512979 DAPK1P53355 1430 aa14.66□□□□□ -0.06
TRIO-220ENST00000512979 NLRP1Q9C000 1473 aa14.65□□□□□ -0.06
TRIO-220ENST00000512979 PDAP1Q13442 181 aaKnown RBP14.65□□□□□ -0.06
TRIO-220ENST00000512979 THEMISQ8N1K5 641 aaPredicted RBP14.65□□□□□ -0.06
TRIO-220ENST00000512979 ZC3H13Q5T200 1668 aaKnown RBP14.65□□□□□ -0.06
TRIO-220ENST00000512979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRIO-220ENST00000512979 MROH1Q8NDA8 1641 aa14.64□□□□□ -0.07
TRIO-220ENST00000512979 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
TRIO-220ENST00000512979 WDR70Q9NW82 654 aa14.63□□□□□ -0.07
TRIO-220ENST00000512979 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
TRIO-220ENST00000512979 UGGT1Q9NYU2 1555 aa14.63□□□□□ -0.07
TRIO-220ENST00000512979 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
TRIO-220ENST00000512979 CROCC2H7BZ55 1655 aa14.62□□□□□ -0.07
TRIO-220ENST00000512979 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
TRIO-220ENST00000512979 CHIC2Q9UKJ5 165 aa14.62□□□□□ -0.07
TRIO-220ENST00000512979 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
TRIO-220ENST00000512979 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
TRIO-220ENST00000512979 NEURL4Q96JN8 1562 aa14.61□□□□□ -0.07
TRIO-220ENST00000512979 KCNV2Q8TDN2 545 aa14.6□□□□□ -0.07
TRIO-220ENST00000512979 FARP1Q9Y4F1 1045 aaPredicted RBP14.6□□□□□ -0.07
TRIO-220ENST00000512979 CEP152O94986 1710 aa14.6□□□□□ -0.07
TRIO-220ENST00000512979 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
TRIO-220ENST00000512979 PRDM15P57071 1507 aaPredicted RBP14.6□□□□□ -0.07
TRIO-220ENST00000512979 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
TRIO-220ENST00000512979 UBAP1LF5GYI3 381 aa14.59□□□□□ -0.07
TRIO-220ENST00000512979 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
TRIO-220ENST00000512979 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
TRIO-220ENST00000512979 KANK1Q14678 1352 aa14.57□□□□□ -0.08
TRIO-220ENST00000512979 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
TRIO-220ENST00000512979 MED14O60244 1454 aa14.56□□□□□ -0.08
TRIO-220ENST00000512979 PSEN1P49768 467 aa14.55□□□□□ -0.08
TRIO-220ENST00000512979 MFRPQ9BY79 579 aa14.55□□□□□ -0.08
TRIO-220ENST00000512979 DEPDC5O75140 1603 aa14.55□□□□□ -0.08
TRIO-220ENST00000512979 CFAP65Q6ZU64 1925 aaKnown RBP14.54□□□□□ -0.08
TRIO-220ENST00000512979 CPS1P31327 1500 aa14.54□□□□□ -0.08
TRIO-220ENST00000512979 ADGRL2O95490 1459 aa14.53□□□□□ -0.08
TRIO-220ENST00000512979 DISP3Q9P2K9 1392 aa14.53□□□□□ -0.08
TRIO-220ENST00000512979 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
TRIO-220ENST00000512979 VWDEQ8N2E2 1590 aa14.52□□□□□ -0.08
TRIO-220ENST00000512979 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
TRIO-220ENST00000512979 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
TRIO-220ENST00000512979 UBR1Q8IWV7 1749 aa14.51□□□□□ -0.09
TRIO-220ENST00000512979 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
TRIO-220ENST00000512979 TXNDC2Q86VQ3 553 aa14.5□□□□□ -0.09
TRIO-220ENST00000512979 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
TRIO-220ENST00000512979 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
TRIO-220ENST00000512979 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
TRIO-220ENST00000512979 LTKP29376 864 aa14.49□□□□□ -0.09
TRIO-220ENST00000512979 LMOD2Q6P5Q4 547 aa14.49□□□□□ -0.09
TRIO-220ENST00000512979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRIO-220ENST00000512979 ARHGAP23Q9P227 1491 aa14.49□□□□□ -0.09
TRIO-220ENST00000512979 SLIT1O75093 1534 aa14.48□□□□□ -0.09
TRIO-220ENST00000512979 TULP1O00294 542 aaPredicted RBP14.48□□□□□ -0.09
TRIO-220ENST00000512979 TOM1O60784 492 aa14.48□□□□□ -0.09
TRIO-220ENST00000512979 PIP4K2BP78356 416 aa14.48□□□□□ -0.09
TRIO-220ENST00000512979 TIMELESSQ9UNS1 1208 aa14.48□□□□□ -0.09
TRIO-220ENST00000512979 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
TRIO-220ENST00000512979 IDI1Q13907 227 aa14.47□□□□□ -0.09
TRIO-220ENST00000512979 TMEM2Q9UHN6 1383 aa14.47□□□□□ -0.09
TRIO-220ENST00000512979 EFCAB6Q5THR3 1501 aa14.46□□□□□ -0.09
TRIO-220ENST00000512979 PIK3C2BO00750 1634 aa14.46□□□□□ -0.09
TRIO-220ENST00000512979 PRKAR2AP13861 404 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 342 ms