RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 MLH3Q9UHC1 1453 aa11.58□□□□□ -0.56
HTT-209ENST00000512068 RICTORQ6R327 1708 aa11.58□□□□□ -0.56
HTT-209ENST00000512068 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
HTT-209ENST00000512068 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
HTT-209ENST00000512068 DHX29Q7Z478 1369 aaKnown RBP11.57□□□□□ -0.56
HTT-209ENST00000512068 MAP3K13O43283 966 aa11.57□□□□□ -0.56
HTT-209ENST00000512068 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
HTT-209ENST00000512068 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
HTT-209ENST00000512068 A2MP01023 1474 aa11.57□□□□□ -0.56
HTT-209ENST00000512068 PPRC1Q5VV67 1664 aaKnown RBP11.56□□□□□ -0.56
HTT-209ENST00000512068 PCDHB13Q9Y5F0 798 aa11.56□□□□□ -0.56
HTT-209ENST00000512068 MAGI2Q86UL8 1455 aa11.56□□□□□ -0.56
HTT-209ENST00000512068 ANKRD30BQ9BXX2 1392 aa11.55□□□□□ -0.56
HTT-209ENST00000512068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
HTT-209ENST00000512068 KIF3BO15066 747 aa11.55□□□□□ -0.56
HTT-209ENST00000512068 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
HTT-209ENST00000512068 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
HTT-209ENST00000512068 PCDHB8Q9UN66 801 aa11.55□□□□□ -0.56
HTT-209ENST00000512068 DEPDC5O75140 1603 aa11.55□□□□□ -0.56
HTT-209ENST00000512068 ABCA6Q8N139 1617 aa11.54□□□□□ -0.56
HTT-209ENST00000512068 STK25O00506 426 aa11.54□□□□□ -0.56
HTT-209ENST00000512068 RPRD2Q5VT52 1461 aaKnown RBP11.53□□□□□ -0.56
HTT-209ENST00000512068 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
HTT-209ENST00000512068 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
HTT-209ENST00000512068 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
HTT-209ENST00000512068 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
HTT-209ENST00000512068 ZMYM4Q5VZL5 1548 aa11.53□□□□□ -0.56
HTT-209ENST00000512068 HAX1O00165 279 aa11.52□□□□□ -0.57
HTT-209ENST00000512068 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
HTT-209ENST00000512068 TET3O43151 1660 aa11.52□□□□□ -0.57
HTT-209ENST00000512068 PRDM15P57071 1507 aaPredicted RBP11.51□□□□□ -0.57
HTT-209ENST00000512068 FRMPD1Q5SYB0 1578 aa11.51□□□□□ -0.57
HTT-209ENST00000512068 RNF17Q9BXT8 1623 aaKnown RBP11.51□□□□□ -0.57
HTT-209ENST00000512068 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
HTT-209ENST00000512068 BCORL1Q5H9F3 1711 aa11.5□□□□□ -0.57
HTT-209ENST00000512068 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
HTT-209ENST00000512068 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
HTT-209ENST00000512068 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
HTT-209ENST00000512068 E9PCH4 1651 aa11.48□□□□□ -0.57
HTT-209ENST00000512068 CEP152O94986 1710 aa11.48□□□□□ -0.57
HTT-209ENST00000512068 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
HTT-209ENST00000512068 PSEN1P49768 467 aa11.47□□□□□ -0.57
HTT-209ENST00000512068 GGT6Q6P531 493 aa11.47□□□□□ -0.57
HTT-209ENST00000512068 VWDEQ8N2E2 1590 aa11.46□□□□□ -0.57
HTT-209ENST00000512068 ATP10AO60312 1499 aa11.46□□□□□ -0.57
HTT-209ENST00000512068 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
HTT-209ENST00000512068 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
HTT-209ENST00000512068 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.58
HTT-209ENST00000512068 MROH1Q8NDA8 1641 aa11.46□□□□□ -0.58
HTT-209ENST00000512068 YEATS2Q9ULM3 1422 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 EVX2Q03828 476 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
HTT-209ENST00000512068 POTEHQ6S545 545 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
HTT-209ENST00000512068 EFCAB6Q5THR3 1501 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 LMTK2Q8IWU2 1503 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 ARHGEF40Q8TER5 1519 aa11.45□□□□□ -0.58
HTT-209ENST00000512068 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
HTT-209ENST00000512068 REREQ9P2R6 1566 aa11.44□□□□□ -0.58
HTT-209ENST00000512068 TRPM2O94759 1503 aa11.44□□□□□ -0.58
HTT-209ENST00000512068 CLCN6P51797 869 aa11.43□□□□□ -0.58
HTT-209ENST00000512068 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
HTT-209ENST00000512068 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
HTT-209ENST00000512068 ABCC3O15438 1527 aa11.41□□□□□ -0.58
HTT-209ENST00000512068 ZNF326Q5BKZ1 582 aaKnown RBP11.41□□□□□ -0.58
HTT-209ENST00000512068 DIEXFQ68CQ4 756 aaKnown RBP11.41□□□□□ -0.58
HTT-209ENST00000512068 MS4A3Q96HJ5 214 aa11.41□□□□□ -0.58
HTT-209ENST00000512068 KIF1BO60333 1816 aa11.41□□□□□ -0.58
HTT-209ENST00000512068 CFAP65Q6ZU64 1925 aaKnown RBP11.41□□□□□ -0.58
HTT-209ENST00000512068 AGLP35573 1532 aa11.4□□□□□ -0.58
HTT-209ENST00000512068 ESF1Q9H501 851 aaKnown RBP11.4□□□□□ -0.58
HTT-209ENST00000512068 PTPRTO14522 1441 aa11.39□□□□□ -0.59
HTT-209ENST00000512068 DCAF11Q8TEB1 546 aa11.39□□□□□ -0.59
HTT-209ENST00000512068 PLA2R1Q13018 1463 aa11.38□□□□□ -0.59
HTT-209ENST00000512068 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
HTT-209ENST00000512068 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
HTT-209ENST00000512068 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
HTT-209ENST00000512068 ARID4BQ4LE39 1312 aaPredicted RBP11.37□□□□□ -0.59
HTT-209ENST00000512068 CNTLNQ9NXG0 1405 aa11.37□□□□□ -0.59
HTT-209ENST00000512068 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
HTT-209ENST00000512068 EIF4G2P78344 907 aaKnown RBP eCLIP11.37□□□□□ -0.59
HTT-209ENST00000512068 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
HTT-209ENST00000512068 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
HTT-209ENST00000512068 NPATQ14207 1427 aa11.35□□□□□ -0.59
HTT-209ENST00000512068 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
HTT-209ENST00000512068 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
HTT-209ENST00000512068 TRPC6Q9Y210 931 aa11.35□□□□□ -0.59
HTT-209ENST00000512068 ARHGAP31Q2M1Z3 1444 aa11.35□□□□□ -0.59
HTT-209ENST00000512068 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
HTT-209ENST00000512068 NEURL4Q96JN8 1562 aa11.34□□□□□ -0.59
HTT-209ENST00000512068 MLECQ14165 292 aa11.34□□□□□ -0.59
HTT-209ENST00000512068 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
HTT-209ENST00000512068 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
HTT-209ENST00000512068 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
HTT-209ENST00000512068 TIE1P35590 1138 aa11.33□□□□□ -0.6
HTT-209ENST00000512068 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
HTT-209ENST00000512068 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
HTT-209ENST00000512068 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
HTT-209ENST00000512068 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
HTT-209ENST00000512068 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms