RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
HMGCR-211ENST00000512053 ABCC3O15438 1527 aa11.34□□□□□ -0.59
HMGCR-211ENST00000512053 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
HMGCR-211ENST00000512053 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
HMGCR-211ENST00000512053 KANK1Q14678 1352 aa11.33□□□□□ -0.6
HMGCR-211ENST00000512053 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
HMGCR-211ENST00000512053 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
HMGCR-211ENST00000512053 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
HMGCR-211ENST00000512053 LTKP29376 864 aa11.32□□□□□ -0.6
HMGCR-211ENST00000512053 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
HMGCR-211ENST00000512053 BCANQ96GW7 911 aa11.32□□□□□ -0.6
HMGCR-211ENST00000512053 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
HMGCR-211ENST00000512053 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
HMGCR-211ENST00000512053 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
HMGCR-211ENST00000512053 ZC3H13Q5T200 1668 aaKnown RBP11.31□□□□□ -0.6
HMGCR-211ENST00000512053 MAST1Q9Y2H9 1570 aa11.31□□□□□ -0.6
HMGCR-211ENST00000512053 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
HMGCR-211ENST00000512053 EIF2AK4Q9P2K8 1649 aaKnown RBP11.3□□□□□ -0.6
HMGCR-211ENST00000512053 KIF15Q9NS87 1388 aa11.29□□□□□ -0.6
HMGCR-211ENST00000512053 SYNMO15061 1565 aa11.29□□□□□ -0.6
HMGCR-211ENST00000512053 PROSER2Q86WR7 435 aaPredicted RBP11.29□□□□□ -0.6
HMGCR-211ENST00000512053 ARHGAP31Q2M1Z3 1444 aa11.28□□□□□ -0.6
HMGCR-211ENST00000512053 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
HMGCR-211ENST00000512053 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
HMGCR-211ENST00000512053 ERBINQ96RT1 1412 aa11.27□□□□□ -0.6
HMGCR-211ENST00000512053 KCNA6P17658 529 aa11.27□□□□□ -0.61
HMGCR-211ENST00000512053 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
HMGCR-211ENST00000512053 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 ARHGAP23Q9P227 1491 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 SLIT1O75093 1534 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 MAP3K1Q13233 1512 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 IDI1Q13907 227 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 SLC26A8Q96RN1 970 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
HMGCR-211ENST00000512053 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
HMGCR-211ENST00000512053 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
HMGCR-211ENST00000512053 CLCN6P51797 869 aa11.24□□□□□ -0.61
HMGCR-211ENST00000512053 SLC52A1Q9NWF4 448 aa11.24□□□□□ -0.61
HMGCR-211ENST00000512053 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-211ENST00000512053 ABCC5O15440 1437 aa11.24□□□□□ -0.61
HMGCR-211ENST00000512053 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
HMGCR-211ENST00000512053 PPP1R15AO75807 674 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-211ENST00000512053 MSH6P52701 1360 aa11.23□□□□□ -0.61
HMGCR-211ENST00000512053 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
HMGCR-211ENST00000512053 DAPK1P53355 1430 aa11.22□□□□□ -0.61
HMGCR-211ENST00000512053 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-211ENST00000512053 EFCAB6Q5THR3 1501 aa11.22□□□□□ -0.61
HMGCR-211ENST00000512053 RBM33Q96EV2 1170 aaKnown RBP11.22□□□□□ -0.61
HMGCR-211ENST00000512053 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
HMGCR-211ENST00000512053 CEP152O94986 1710 aa11.21□□□□□ -0.61
HMGCR-211ENST00000512053 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
HMGCR-211ENST00000512053 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
HMGCR-211ENST00000512053 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
HMGCR-211ENST00000512053 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
HMGCR-211ENST00000512053 FAM50AQ14320 339 aaKnown RBP11.19□□□□□ -0.62
HMGCR-211ENST00000512053 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
HMGCR-211ENST00000512053 PIK3C2BO00750 1634 aa11.19□□□□□ -0.62
HMGCR-211ENST00000512053 PTPN23Q9H3S7 1636 aa11.18□□□□□ -0.62
HMGCR-211ENST00000512053 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
HMGCR-211ENST00000512053 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
HMGCR-211ENST00000512053 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
HMGCR-211ENST00000512053 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
HMGCR-211ENST00000512053 NKTRP30414 1462 aaKnown RBP11.17□□□□□ -0.62
HMGCR-211ENST00000512053 JCADQ9P266 1359 aa11.16□□□□□ -0.62
HMGCR-211ENST00000512053 NOS1P29475 1434 aa11.16□□□□□ -0.62
HMGCR-211ENST00000512053 ATF3P18847 181 aa11.15□□□□□ -0.62
HMGCR-211ENST00000512053 TBX22Q9Y458 520 aa11.15□□□□□ -0.62
HMGCR-211ENST00000512053 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
HMGCR-211ENST00000512053 TET3O43151 1660 aa11.14□□□□□ -0.63
HMGCR-211ENST00000512053 CFAP65Q6ZU64 1925 aaKnown RBP11.14□□□□□ -0.63
HMGCR-211ENST00000512053 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-211ENST00000512053 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
HMGCR-211ENST00000512053 KDM5AP29375 1690 aaKnown RBP11.14□□□□□ -0.63
HMGCR-211ENST00000512053 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
HMGCR-211ENST00000512053 SPATA31A6Q5VVP1 1343 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 ROBO1Q9Y6N7 1651 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 ADGRB3O60242 1522 aa11.13□□□□□ -0.63
HMGCR-211ENST00000512053 NCOA3Q9Y6Q9 1424 aa11.12□□□□□ -0.63
HMGCR-211ENST00000512053 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
HMGCR-211ENST00000512053 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
HMGCR-211ENST00000512053 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
HMGCR-211ENST00000512053 XIRP1Q702N8 1843 aaKnown RBP11.1□□□□□ -0.63
HMGCR-211ENST00000512053 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
HMGCR-211ENST00000512053 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
HMGCR-211ENST00000512053 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
HMGCR-211ENST00000512053 RXRBP28702 533 aa11.09□□□□□ -0.63
HMGCR-211ENST00000512053 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
HMGCR-211ENST00000512053 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
HMGCR-211ENST00000512053 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
HMGCR-211ENST00000512053 NUTM2BA6NNL0 878 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-211ENST00000512053 NUTM2EB1AL46 878 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-211ENST00000512053 GALR2O43603 387 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-211ENST00000512053 NUTM2AQ8IVF1 878 aaPredicted RBP11.08□□□□□ -0.64
HMGCR-211ENST00000512053 AMOTL2Q9Y2J4 779 aa11.08□□□□□ -0.64
HMGCR-211ENST00000512053 PHLPP1O60346 1717 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms