RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ABCC5O15440 1437 aa13.38□□□□□ -0.27
PDPN-209ENST00000510906 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
PDPN-209ENST00000510906 PTPN23Q9H3S7 1636 aa13.36□□□□□ -0.27
PDPN-209ENST00000510906 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
PDPN-209ENST00000510906 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
PDPN-209ENST00000510906 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
PDPN-209ENST00000510906 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.34□□□□□ -0.27
PDPN-209ENST00000510906 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
PDPN-209ENST00000510906 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDPN-209ENST00000510906 FBXO31Q5XUX0 539 aaPredicted RBP13.34□□□□□ -0.27
PDPN-209ENST00000510906 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
PDPN-209ENST00000510906 DAPK1P53355 1430 aa13.33□□□□□ -0.28
PDPN-209ENST00000510906 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.28
PDPN-209ENST00000510906 KIF15Q9NS87 1388 aa13.32□□□□□ -0.28
PDPN-209ENST00000510906 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
PDPN-209ENST00000510906 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
PDPN-209ENST00000510906 RRP7BPQ9NSQ0 103 aa13.32□□□□□ -0.28
PDPN-209ENST00000510906 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
PDPN-209ENST00000510906 PZPP20742 1482 aa13.31□□□□□ -0.28
PDPN-209ENST00000510906 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
PDPN-209ENST00000510906 DUOX2Q9NRD8 1548 aa13.31□□□□□ -0.28
PDPN-209ENST00000510906 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
PDPN-209ENST00000510906 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
PDPN-209ENST00000510906 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
PDPN-209ENST00000510906 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
PDPN-209ENST00000510906 FAM50AQ14320 339 aaKnown RBP13.3□□□□□ -0.28
PDPN-209ENST00000510906 DNMT1P26358 1616 aaKnown RBP13.3□□□□□ -0.28
PDPN-209ENST00000510906 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
PDPN-209ENST00000510906 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
PDPN-209ENST00000510906 TNRQ92752 1358 aa13.3□□□□□ -0.28
PDPN-209ENST00000510906 PTPRTO14522 1441 aa13.3□□□□□ -0.28
PDPN-209ENST00000510906 ABCC3O15438 1527 aa13.29□□□□□ -0.28
PDPN-209ENST00000510906 CEP170BQ9Y4F5 1589 aaPredicted RBP13.29□□□□□ -0.28
PDPN-209ENST00000510906 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
PDPN-209ENST00000510906 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
PDPN-209ENST00000510906 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
PDPN-209ENST00000510906 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
PDPN-209ENST00000510906 EIF2AK4Q9P2K8 1649 aaKnown RBP13.28□□□□□ -0.28
PDPN-209ENST00000510906 ERBINQ96RT1 1412 aa13.28□□□□□ -0.28
PDPN-209ENST00000510906 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
PDPN-209ENST00000510906 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
PDPN-209ENST00000510906 PPARGC1BQ86YN6 1023 aaKnown RBP13.27□□□□□ -0.29
PDPN-209ENST00000510906 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
PDPN-209ENST00000510906 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
PDPN-209ENST00000510906 ANKRD30AQ9BXX3 1397 aa13.27□□□□□ -0.29
PDPN-209ENST00000510906 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
PDPN-209ENST00000510906 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
PDPN-209ENST00000510906 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
PDPN-209ENST00000510906 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
PDPN-209ENST00000510906 ZC3H13Q5T200 1668 aaKnown RBP13.23□□□□□ -0.29
PDPN-209ENST00000510906 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
PDPN-209ENST00000510906 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
PDPN-209ENST00000510906 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
PDPN-209ENST00000510906 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
PDPN-209ENST00000510906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDPN-209ENST00000510906 CEP152O94986 1710 aa13.2□□□□□ -0.3
PDPN-209ENST00000510906 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
PDPN-209ENST00000510906 KANK1Q14678 1352 aa13.2□□□□□ -0.3
PDPN-209ENST00000510906 ZNF335Q9H4Z2 1342 aaPredicted RBP13.19□□□□□ -0.3
PDPN-209ENST00000510906 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
PDPN-209ENST00000510906 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
PDPN-209ENST00000510906 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
PDPN-209ENST00000510906 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
PDPN-209ENST00000510906 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
PDPN-209ENST00000510906 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
PDPN-209ENST00000510906 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
PDPN-209ENST00000510906 VWDEQ8N2E2 1590 aa13.17□□□□□ -0.3
PDPN-209ENST00000510906 ITGAEP38570 1179 aa13.17□□□□□ -0.3
PDPN-209ENST00000510906 ANKLE2Q86XL3 938 aa13.17□□□□□ -0.3
PDPN-209ENST00000510906 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
PDPN-209ENST00000510906 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
PDPN-209ENST00000510906 LMTK2Q8IWU2 1503 aa13.16□□□□□ -0.3
PDPN-209ENST00000510906 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.3
PDPN-209ENST00000510906 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
PDPN-209ENST00000510906 ROCK1Q13464 1354 aa13.14□□□□□ -0.31
PDPN-209ENST00000510906 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
PDPN-209ENST00000510906 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
PDPN-209ENST00000510906 MED14O60244 1454 aa13.11□□□□□ -0.31
PDPN-209ENST00000510906 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
PDPN-209ENST00000510906 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
PDPN-209ENST00000510906 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
PDPN-209ENST00000510906 IDI1Q13907 227 aa13.1□□□□□ -0.31
PDPN-209ENST00000510906 NOS1P29475 1434 aa13.1□□□□□ -0.31
PDPN-209ENST00000510906 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
PDPN-209ENST00000510906 SYNMO15061 1565 aa13.09□□□□□ -0.31
PDPN-209ENST00000510906 LTKP29376 864 aa13.09□□□□□ -0.31
PDPN-209ENST00000510906 PSEN1P49768 467 aa13.09□□□□□ -0.31
PDPN-209ENST00000510906 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
PDPN-209ENST00000510906 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
PDPN-209ENST00000510906 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
PDPN-209ENST00000510906 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
PDPN-209ENST00000510906 PIK3C2BO00750 1634 aa13.08□□□□□ -0.32
PDPN-209ENST00000510906 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
PDPN-209ENST00000510906 UNC13BO14795 1591 aa13.07□□□□□ -0.32
PDPN-209ENST00000510906 IFNL1Q8IU54 200 aa13.07□□□□□ -0.32
PDPN-209ENST00000510906 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
PDPN-209ENST00000510906 SLIT1O75093 1534 aa13.07□□□□□ -0.32
PDPN-209ENST00000510906 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
PDPN-209ENST00000510906 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
PDPN-209ENST00000510906 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms