RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
HTT-208ENST00000510626 ARID3AQ99856 593 aa10.12□□□□□ -0.79
HTT-208ENST00000510626 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
HTT-208ENST00000510626 SRPK2P78362 688 aaKnown RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 CCDC73Q6ZRK6 1079 aa10.12□□□□□ -0.79
HTT-208ENST00000510626 CCAR2Q8N163 923 aaKnown RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 API5Q9BZZ5 524 aaKnown RBP10.12□□□□□ -0.79
HTT-208ENST00000510626 IQCEQ6IPM2 695 aa10.11□□□□□ -0.79
HTT-208ENST00000510626 SASS6Q6UVJ0 657 aa10.11□□□□□ -0.79
HTT-208ENST00000510626 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
HTT-208ENST00000510626 RASSF8Q8NHQ8 419 aa10.11□□□□□ -0.79
HTT-208ENST00000510626 CAVIN2O95810 425 aa10.1□□□□□ -0.79
HTT-208ENST00000510626 TUBB4AP04350 444 aa10.1□□□□□ -0.79
HTT-208ENST00000510626 EIF3JO75822 258 aaKnown RBP10.1□□□□□ -0.79
HTT-208ENST00000510626 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
HTT-208ENST00000510626 NUP155O75694 1391 aa10.1□□□□□ -0.79
HTT-208ENST00000510626 C22orf23Q9BZE7 217 aa10.1□□□□□ -0.79
HTT-208ENST00000510626 H0YHG0 523 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 ERC2O15083 957 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 CUX1P39880 1505 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 DDX11Q96FC9 970 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 MCM3P25205 808 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 PSMA5P28066 241 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 HS1BP3Q53T59 392 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 USP47Q96K76 1375 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 ERLIN1O75477 346 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 TSPY26PQ9H489 355 aa10.09□□□□□ -0.79
HTT-208ENST00000510626 TRIM29Q14134 588 aa10.08□□□□□ -0.8
HTT-208ENST00000510626 HIP1O00291 1037 aa10.08□□□□□ -0.8
HTT-208ENST00000510626 DZIP1LQ8IYY4 767 aaKnown RBP10.08□□□□□ -0.8
HTT-208ENST00000510626 CDC45O75419 566 aa10.08□□□□□ -0.8
HTT-208ENST00000510626 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
HTT-208ENST00000510626 GORABQ5T7V8 394 aa10.08□□□□□ -0.8
HTT-208ENST00000510626 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
HTT-208ENST00000510626 KIAA0754O94854 1291 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 PDE3AQ14432 1141 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 LUC7LQ9NQ29 371 aaKnown RBP10.07□□□□□ -0.8
HTT-208ENST00000510626 CUX2O14529 1486 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 CREBRFQ8IUR6 639 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 AKNAQ7Z591 1439 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
HTT-208ENST00000510626 CCDC7Q96M83 1385 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 CLSTN1O94985 981 aa10.07□□□□□ -0.8
HTT-208ENST00000510626 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 ANKRD45Q5TZF3 282 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
HTT-208ENST00000510626 DHX29Q7Z478 1369 aaKnown RBP10.06□□□□□ -0.8
HTT-208ENST00000510626 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 SOGA1O94964 1423 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 TRAK2O60296 914 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 SAFBQ15424 915 aaKnown RBP eCLIP10.06□□□□□ -0.8
HTT-208ENST00000510626 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
HTT-208ENST00000510626 CCDC144AA2RUR9 1427 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 L3MBTL2Q969R5 705 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 CCDC192P0DO97 292 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 FAM193AP78312 1265 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 BICD2Q8TD16 824 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
HTT-208ENST00000510626 SMC3Q9UQE7 1217 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 ERLIN2O94905 339 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 CPLX1O14810 134 aa10.05□□□□□ -0.8
HTT-208ENST00000510626 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 A6NNZ2 444 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 DYNC1I1O14576 645 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 TUBB8Q3ZCM7 444 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 ESPNB1AK53 854 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 CCDC112Q8NEF3 446 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 TMX4Q9H1E5 349 aaPredicted RBP10.04□□□□□ -0.8
HTT-208ENST00000510626 KCNH8Q96L42 1107 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 ZNF396Q96N95 335 aaPredicted RBP10.04□□□□□ -0.8
HTT-208ENST00000510626 JMYQ8N9B5 988 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 PLEKHH1Q9ULM0 1364 aa10.04□□□□□ -0.8
HTT-208ENST00000510626 DNAJC2Q99543 621 aaKnown RBP10.04□□□□□ -0.8
HTT-208ENST00000510626 CBFA2T2O43439 604 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 AEBP1Q8IUX7 1158 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 GOLGA6L10A0A0M3HER8 536 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 CLUAP1Q96AJ1 413 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 EXOC6Q8TAG9 804 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 PANK3Q9H999 370 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
HTT-208ENST00000510626 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
HTT-208ENST00000510626 SH3BGRP55822 239 aaPredicted RBP10.02□□□□□ -0.81
HTT-208ENST00000510626 ATAD2Q6PL18 1390 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 TAF7LQ5H9L4 462 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 KINO60870 393 aaKnown RBP10.02□□□□□ -0.81
HTT-208ENST00000510626 EVC2Q86UK5 1308 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 ZSCAN30Q86W11 494 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
HTT-208ENST00000510626 R3HCC1Q9Y3T6 440 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms