RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ABCC1P33527 1531 aa14.09□□□□□ -0.15
COL4A3BP-206ENST00000508809 C3P01024 1663 aa14.08□□□□□ -0.16
COL4A3BP-206ENST00000508809 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
COL4A3BP-206ENST00000508809 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.16
COL4A3BP-206ENST00000508809 ITSN2Q9NZM3 1697 aa14.07□□□□□ -0.16
COL4A3BP-206ENST00000508809 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
COL4A3BP-206ENST00000508809 PTPRTO14522 1441 aa14.07□□□□□ -0.16
COL4A3BP-206ENST00000508809 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
COL4A3BP-206ENST00000508809 BOLA1Q9Y3E2 137 aa14.06□□□□□ -0.16
COL4A3BP-206ENST00000508809 ESF1Q9H501 851 aaKnown RBP14.05□□□□□ -0.16
COL4A3BP-206ENST00000508809 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
COL4A3BP-206ENST00000508809 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
COL4A3BP-206ENST00000508809 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
COL4A3BP-206ENST00000508809 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
COL4A3BP-206ENST00000508809 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
COL4A3BP-206ENST00000508809 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
COL4A3BP-206ENST00000508809 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.16
COL4A3BP-206ENST00000508809 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
COL4A3BP-206ENST00000508809 FYCO1Q9BQS8 1478 aa14.02□□□□□ -0.16
COL4A3BP-206ENST00000508809 NPATQ14207 1427 aa14□□□□□ -0.17
COL4A3BP-206ENST00000508809 KIAA1107Q9UPP5 1409 aa14□□□□□ -0.17
COL4A3BP-206ENST00000508809 ZMYM3Q14202 1370 aa14□□□□□ -0.17
COL4A3BP-206ENST00000508809 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
COL4A3BP-206ENST00000508809 MS4A4AQ96JQ5 239 aa14□□□□□ -0.17
COL4A3BP-206ENST00000508809 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
COL4A3BP-206ENST00000508809 NCOA1Q15788 1441 aa13.99□□□□□ -0.17
COL4A3BP-206ENST00000508809 SPAG9O60271 1321 aaKnown RBP13.99□□□□□ -0.17
COL4A3BP-206ENST00000508809 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
COL4A3BP-206ENST00000508809 LTBP4Q8N2S1 1624 aa13.99□□□□□ -0.17
COL4A3BP-206ENST00000508809 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
COL4A3BP-206ENST00000508809 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
COL4A3BP-206ENST00000508809 PLEKHH2Q8IVE3 1493 aa13.96□□□□□ -0.17
COL4A3BP-206ENST00000508809 SLAIN1Q8ND83 568 aa13.96□□□□□ -0.17
COL4A3BP-206ENST00000508809 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.17
COL4A3BP-206ENST00000508809 SUPT6HQ7KZ85 1726 aaKnown RBP13.95□□□□□ -0.18
COL4A3BP-206ENST00000508809 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
COL4A3BP-206ENST00000508809 CAMSAP1Q5T5Y3 1602 aa13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 MICALL2Q8IY33 904 aa13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 BBXQ8WY36 941 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
COL4A3BP-206ENST00000508809 A2MP01023 1474 aa13.93□□□□□ -0.18
COL4A3BP-206ENST00000508809 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
COL4A3BP-206ENST00000508809 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
COL4A3BP-206ENST00000508809 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
COL4A3BP-206ENST00000508809 NCKAP5LQ9HCH0 1330 aa13.92□□□□□ -0.18
COL4A3BP-206ENST00000508809 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
COL4A3BP-206ENST00000508809 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
COL4A3BP-206ENST00000508809 TMEM121BQ9BXQ6 578 aaPredicted RBP13.92□□□□□ -0.18
COL4A3BP-206ENST00000508809 GGT6Q6P531 493 aa13.91□□□□□ -0.18
COL4A3BP-206ENST00000508809 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
COL4A3BP-206ENST00000508809 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
COL4A3BP-206ENST00000508809 PLA2R1Q13018 1463 aa13.9□□□□□ -0.18
COL4A3BP-206ENST00000508809 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-206ENST00000508809 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
COL4A3BP-206ENST00000508809 SOCS7O14512 581 aa13.89□□□□□ -0.19
COL4A3BP-206ENST00000508809 RTEL1-TNFRSF6BF6WH68 1400 aa13.89□□□□□ -0.19
COL4A3BP-206ENST00000508809 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
COL4A3BP-206ENST00000508809 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
COL4A3BP-206ENST00000508809 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
COL4A3BP-206ENST00000508809 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
COL4A3BP-206ENST00000508809 MYO3AQ8NEV4 1616 aa13.86□□□□□ -0.19
COL4A3BP-206ENST00000508809 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
COL4A3BP-206ENST00000508809 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
COL4A3BP-206ENST00000508809 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
COL4A3BP-206ENST00000508809 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
COL4A3BP-206ENST00000508809 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
COL4A3BP-206ENST00000508809 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
COL4A3BP-206ENST00000508809 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 UBAP1LF5GYI3 381 aa13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 SNPHO15079 494 aa13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 GTPBP6O43824 516 aaPredicted RBP13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 SPATA31D1Q6ZQQ2 1576 aa13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
COL4A3BP-206ENST00000508809 PPP1R37O75864 691 aa13.81□□□□□ -0.2
COL4A3BP-206ENST00000508809 KIF3BO15066 747 aa13.8□□□□□ -0.2
COL4A3BP-206ENST00000508809 FBXO31Q5XUX0 539 aaPredicted RBP13.8□□□□□ -0.2
COL4A3BP-206ENST00000508809 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
COL4A3BP-206ENST00000508809 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
COL4A3BP-206ENST00000508809 TNRQ92752 1358 aa13.78□□□□□ -0.2
COL4A3BP-206ENST00000508809 PZPP20742 1482 aa13.78□□□□□ -0.2
COL4A3BP-206ENST00000508809 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
COL4A3BP-206ENST00000508809 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
COL4A3BP-206ENST00000508809 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
COL4A3BP-206ENST00000508809 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
COL4A3BP-206ENST00000508809 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 MIA2Q96PC5 1412 aa13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 THEMISQ8N1K5 641 aaPredicted RBP13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
COL4A3BP-206ENST00000508809 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
COL4A3BP-206ENST00000508809 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
COL4A3BP-206ENST00000508809 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
COL4A3BP-206ENST00000508809 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
COL4A3BP-206ENST00000508809 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
COL4A3BP-206ENST00000508809 CPS1P31327 1500 aa13.73□□□□□ -0.21
COL4A3BP-206ENST00000508809 NLRP1Q9C000 1473 aa13.73□□□□□ -0.21
COL4A3BP-206ENST00000508809 TOM1O60784 492 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms