RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
LIN54-207ENST00000508171 PLIN1O60240 522 aa14.53□□□□□ -0.08
LIN54-207ENST00000508171 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
LIN54-207ENST00000508171 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.08
LIN54-207ENST00000508171 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
LIN54-207ENST00000508171 CFAP65Q6ZU64 1925 aaKnown RBP14.51□□□□□ -0.09
LIN54-207ENST00000508171 KIDINS220Q9ULH0 1771 aa14.5□□□□□ -0.09
LIN54-207ENST00000508171 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
LIN54-207ENST00000508171 INSRP06213 1382 aa14.5□□□□□ -0.09
LIN54-207ENST00000508171 MYOM1P52179 1685 aa14.49□□□□□ -0.09
LIN54-207ENST00000508171 SYNMO15061 1565 aa14.49□□□□□ -0.09
LIN54-207ENST00000508171 ZMYM4Q5VZL5 1548 aa14.49□□□□□ -0.09
LIN54-207ENST00000508171 KIF1BO60333 1816 aa14.48□□□□□ -0.09
LIN54-207ENST00000508171 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIN54-207ENST00000508171 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
LIN54-207ENST00000508171 ASXL1Q8IXJ9 1541 aa14.47□□□□□ -0.09
LIN54-207ENST00000508171 MAP3K4Q9Y6R4 1608 aa14.47□□□□□ -0.09
LIN54-207ENST00000508171 KIAA1210Q9ULL0 1709 aa14.47□□□□□ -0.09
LIN54-207ENST00000508171 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
LIN54-207ENST00000508171 ABCA6Q8N139 1617 aa14.47□□□□□ -0.09
LIN54-207ENST00000508171 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.09
LIN54-207ENST00000508171 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.1
LIN54-207ENST00000508171 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
LIN54-207ENST00000508171 EFCAB6Q5THR3 1501 aa14.45□□□□□ -0.1
LIN54-207ENST00000508171 KDM5AP29375 1690 aaKnown RBP14.45□□□□□ -0.1
LIN54-207ENST00000508171 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
LIN54-207ENST00000508171 GGT6Q6P531 493 aa14.44□□□□□ -0.1
LIN54-207ENST00000508171 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
LIN54-207ENST00000508171 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
LIN54-207ENST00000508171 CRBNQ96SW2 442 aa14.44□□□□□ -0.1
LIN54-207ENST00000508171 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 MYOM2P54296 1465 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIN54-207ENST00000508171 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 ZNF518AQ6AHZ1 1483 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
LIN54-207ENST00000508171 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
LIN54-207ENST00000508171 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
LIN54-207ENST00000508171 NOS1P29475 1434 aa14.41□□□□□ -0.1
LIN54-207ENST00000508171 NPC1L1Q9UHC9 1359 aa14.41□□□□□ -0.1
LIN54-207ENST00000508171 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
LIN54-207ENST00000508171 SKAP1Q86WV1 359 aa14.4□□□□□ -0.1
LIN54-207ENST00000508171 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
LIN54-207ENST00000508171 GOLGA2Q08379 1002 aa14.4□□□□□ -0.1
LIN54-207ENST00000508171 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
LIN54-207ENST00000508171 NOP58Q9Y2X3 529 aaKnown RBP14.4□□□□□ -0.1
LIN54-207ENST00000508171 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
LIN54-207ENST00000508171 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
LIN54-207ENST00000508171 NPATQ14207 1427 aa14.39□□□□□ -0.11
LIN54-207ENST00000508171 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
LIN54-207ENST00000508171 LMTK2Q8IWU2 1503 aa14.39□□□□□ -0.11
LIN54-207ENST00000508171 APAF1O14727 1248 aa14.38□□□□□ -0.11
LIN54-207ENST00000508171 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
LIN54-207ENST00000508171 ANP32AP39687 249 aaKnown RBP14.38□□□□□ -0.11
LIN54-207ENST00000508171 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
LIN54-207ENST00000508171 TCERG1O14776 1098 aaKnown RBP14.38□□□□□ -0.11
LIN54-207ENST00000508171 FRMPD1Q5SYB0 1578 aa14.37□□□□□ -0.11
LIN54-207ENST00000508171 IPO9Q96P70 1041 aaKnown RBP14.37□□□□□ -0.11
LIN54-207ENST00000508171 CENPJQ9HC77 1338 aaPredicted RBP14.37□□□□□ -0.11
LIN54-207ENST00000508171 ADGRB3O60242 1522 aa14.37□□□□□ -0.11
LIN54-207ENST00000508171 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
LIN54-207ENST00000508171 NUTM2DQ5VT03 806 aaPredicted RBP14.37□□□□□ -0.11
LIN54-207ENST00000508171 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
LIN54-207ENST00000508171 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
LIN54-207ENST00000508171 C14orf93Q9H972 538 aaKnown RBP14.36□□□□□ -0.11
LIN54-207ENST00000508171 PDE4AP27815 886 aa14.36□□□□□ -0.11
LIN54-207ENST00000508171 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
LIN54-207ENST00000508171 PPLO60437 1756 aa14.35□□□□□ -0.11
LIN54-207ENST00000508171 MLH3Q9UHC1 1453 aa14.35□□□□□ -0.11
LIN54-207ENST00000508171 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
LIN54-207ENST00000508171 NPM2Q86SE8 214 aaKnown RBP14.34□□□□□ -0.11
LIN54-207ENST00000508171 MYO3AQ8NEV4 1616 aa14.34□□□□□ -0.11
LIN54-207ENST00000508171 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
LIN54-207ENST00000508171 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
LIN54-207ENST00000508171 SBNO2Q9Y2G9 1366 aa14.33□□□□□ -0.11
LIN54-207ENST00000508171 BACH2Q9BYV9 841 aa14.33□□□□□ -0.12
LIN54-207ENST00000508171 HECW2Q9P2P5 1572 aa14.33□□□□□ -0.12
LIN54-207ENST00000508171 SETBP1Q9Y6X0 1596 aa14.32□□□□□ -0.12
LIN54-207ENST00000508171 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
LIN54-207ENST00000508171 ZBTB47Q9UFB7 747 aaPredicted RBP14.31□□□□□ -0.12
LIN54-207ENST00000508171 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
LIN54-207ENST00000508171 MS4A1P11836 297 aa14.31□□□□□ -0.12
LIN54-207ENST00000508171 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
LIN54-207ENST00000508171 ADGRB1O14514 1584 aa14.31□□□□□ -0.12
LIN54-207ENST00000508171 SIGLEC1Q9BZZ2 1709 aa14.31□□□□□ -0.12
LIN54-207ENST00000508171 NBR1Q14596 966 aa14.3□□□□□ -0.12
LIN54-207ENST00000508171 ABCC3O15438 1527 aa14.3□□□□□ -0.12
LIN54-207ENST00000508171 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
LIN54-207ENST00000508171 BCAR3O75815 825 aa14.3□□□□□ -0.12
LIN54-207ENST00000508171 MORC1Q86VD1 984 aa14.3□□□□□ -0.12
LIN54-207ENST00000508171 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
LIN54-207ENST00000508171 KDM2BQ8NHM5 1336 aa14.29□□□□□ -0.12
LIN54-207ENST00000508171 RPGRIP1LQ68CZ1 1315 aa14.28□□□□□ -0.12
LIN54-207ENST00000508171 NKTRP30414 1462 aaKnown RBP14.28□□□□□ -0.12
LIN54-207ENST00000508171 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
LIN54-207ENST00000508171 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
LIN54-207ENST00000508171 CAMSAP1Q5T5Y3 1602 aa14.27□□□□□ -0.12
LIN54-207ENST00000508171 NEUROD2Q15784 382 aa14.27□□□□□ -0.12
LIN54-207ENST00000508171 E9PSI1 815 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms