RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 RNF17Q9BXT8 1623 aaKnown RBP8.56□□□□□ -1.04
USP46-206ENST00000506707 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
USP46-206ENST00000506707 TRIM26Q12899 539 aaPredicted RBP8.56□□□□□ -1.04
USP46-206ENST00000506707 NUP155O75694 1391 aa8.56□□□□□ -1.04
USP46-206ENST00000506707 KANK1Q14678 1352 aa8.56□□□□□ -1.04
USP46-206ENST00000506707 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
USP46-206ENST00000506707 ABCC3O15438 1527 aa8.55□□□□□ -1.04
USP46-206ENST00000506707 VWDEQ8N2E2 1590 aa8.55□□□□□ -1.04
USP46-206ENST00000506707 SETD5Q9C0A6 1442 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 PRDM15P57071 1507 aaPredicted RBP8.54□□□□□ -1.04
USP46-206ENST00000506707 FAM135AQ9P2D6 1515 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 HRCP23327 699 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 SCUBE2Q9NQ36 999 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 DEPDC5O75140 1603 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 NPATQ14207 1427 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 ARHGAP31Q2M1Z3 1444 aa8.54□□□□□ -1.04
USP46-206ENST00000506707 FER1L4A9Z1Z3 1794 aa8.53□□□□□ -1.04
USP46-206ENST00000506707 POTEJP0CG39 1038 aa8.53□□□□□ -1.04
USP46-206ENST00000506707 CLTCQ00610 1675 aaKnown RBP8.53□□□□□ -1.04
USP46-206ENST00000506707 PZPP20742 1482 aa8.52□□□□□ -1.05
USP46-206ENST00000506707 RAB3GAP2Q9H2M9 1393 aa8.52□□□□□ -1.05
USP46-206ENST00000506707 MROH2AA6NES4 1674 aa8.51□□□□□ -1.05
USP46-206ENST00000506707 C3P01024 1663 aa8.51□□□□□ -1.05
USP46-206ENST00000506707 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
USP46-206ENST00000506707 UNC13BO14795 1591 aa8.51□□□□□ -1.05
USP46-206ENST00000506707 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
USP46-206ENST00000506707 TNRQ92752 1358 aa8.5□□□□□ -1.05
USP46-206ENST00000506707 PKD2Q13563 968 aa8.5□□□□□ -1.05
USP46-206ENST00000506707 IDI1Q13907 227 aa8.5□□□□□ -1.05
USP46-206ENST00000506707 MPHOSPH9Q99550 1183 aa8.5□□□□□ -1.05
USP46-206ENST00000506707 GCC2Q8IWJ2 1684 aa8.49□□□□□ -1.05
USP46-206ENST00000506707 NOS1P29475 1434 aa8.49□□□□□ -1.05
USP46-206ENST00000506707 HSPA2P54652 639 aa8.49□□□□□ -1.05
USP46-206ENST00000506707 ERVK-7P63135 1459 aa8.49□□□□□ -1.05
USP46-206ENST00000506707 LMTK3Q96Q04 1460 aa8.49□□□□□ -1.05
USP46-206ENST00000506707 ZC3H13Q5T200 1668 aaKnown RBP8.49□□□□□ -1.05
USP46-206ENST00000506707 SLC52A1Q9NWF4 448 aa8.48□□□□□ -1.05
USP46-206ENST00000506707 RPRD2Q5VT52 1461 aaKnown RBP8.48□□□□□ -1.05
USP46-206ENST00000506707 EFCAB6Q5THR3 1501 aa8.48□□□□□ -1.05
USP46-206ENST00000506707 SPATA31D1Q6ZQQ2 1576 aa8.48□□□□□ -1.05
USP46-206ENST00000506707 CAMSAP1Q5T5Y3 1602 aa8.47□□□□□ -1.05
USP46-206ENST00000506707 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
USP46-206ENST00000506707 UHRF1BP1Q6BDS2 1440 aa8.47□□□□□ -1.05
USP46-206ENST00000506707 CEP152O94986 1710 aa8.47□□□□□ -1.05
USP46-206ENST00000506707 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
USP46-206ENST00000506707 PTPRTO14522 1441 aa8.46□□□□□ -1.05
USP46-206ENST00000506707 NLRP1Q9C000 1473 aa8.46□□□□□ -1.05
USP46-206ENST00000506707 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
USP46-206ENST00000506707 THEMISQ8N1K5 641 aaPredicted RBP8.46□□□□□ -1.06
USP46-206ENST00000506707 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
USP46-206ENST00000506707 TET3O43151 1660 aa8.46□□□□□ -1.06
USP46-206ENST00000506707 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
USP46-206ENST00000506707 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
USP46-206ENST00000506707 PCGF6Q9BYE7 350 aa8.45□□□□□ -1.06
USP46-206ENST00000506707 E9PCH4 1651 aa8.43□□□□□ -1.06
USP46-206ENST00000506707 TSPYL2Q9H2G4 693 aaPredicted RBP8.43□□□□□ -1.06
USP46-206ENST00000506707 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
USP46-206ENST00000506707 SYNMO15061 1565 aa8.43□□□□□ -1.06
USP46-206ENST00000506707 PREX1Q8TCU6 1659 aa8.43□□□□□ -1.06
USP46-206ENST00000506707 LTKP29376 864 aa8.42□□□□□ -1.06
USP46-206ENST00000506707 CCDC61Q9Y6R9 512 aa8.42□□□□□ -1.06
USP46-206ENST00000506707 UGGT1Q9NYU2 1555 aa8.42□□□□□ -1.06
USP46-206ENST00000506707 CEP170BQ9Y4F5 1589 aaPredicted RBP8.42□□□□□ -1.06
USP46-206ENST00000506707 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
USP46-206ENST00000506707 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
USP46-206ENST00000506707 CHGAP10645 457 aaKnown RBP8.41□□□□□ -1.06
USP46-206ENST00000506707 ANKLE2Q86XL3 938 aa8.41□□□□□ -1.06
USP46-206ENST00000506707 CFAP65Q6ZU64 1925 aaKnown RBP8.41□□□□□ -1.06
USP46-206ENST00000506707 TMEM2Q9UHN6 1383 aa8.4□□□□□ -1.06
USP46-206ENST00000506707 TXNDC2Q86VQ3 553 aa8.4□□□□□ -1.06
USP46-206ENST00000506707 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
USP46-206ENST00000506707 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
USP46-206ENST00000506707 TIE1P35590 1138 aa8.39□□□□□ -1.07
USP46-206ENST00000506707 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
USP46-206ENST00000506707 ARHGAP23Q9P227 1491 aa8.38□□□□□ -1.07
USP46-206ENST00000506707 ZNF142P52746 1687 aaPredicted RBP8.38□□□□□ -1.07
USP46-206ENST00000506707 EID1Q9Y6B2 187 aa8.38□□□□□ -1.07
USP46-206ENST00000506707 PIK3C2BO00750 1634 aa8.38□□□□□ -1.07
USP46-206ENST00000506707 TRPM2O94759 1503 aa8.38□□□□□ -1.07
USP46-206ENST00000506707 DHX57Q6P158 1386 aaKnown RBP8.37□□□□□ -1.07
USP46-206ENST00000506707 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
USP46-206ENST00000506707 ZNF326Q5BKZ1 582 aaKnown RBP8.37□□□□□ -1.07
USP46-206ENST00000506707 SLIT1O75093 1534 aa8.37□□□□□ -1.07
USP46-206ENST00000506707 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
USP46-206ENST00000506707 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
USP46-206ENST00000506707 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 ADGRB3O60242 1522 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
USP46-206ENST00000506707 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP46-206ENST00000506707 UBR1Q8IWV7 1749 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 MED14O60244 1454 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 SPATA31E1Q6ZUB1 1445 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 RIMS2Q9UQ26 1411 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 CLTCL1P53675 1640 aa8.36□□□□□ -1.07
USP46-206ENST00000506707 STRCQ7RTU9 1775 aa8.35□□□□□ -1.07
USP46-206ENST00000506707 RPGRIP1LQ68CZ1 1315 aa8.35□□□□□ -1.07
USP46-206ENST00000506707 SPHKAPQ2M3C7 1700 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms