RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 BCL2L13Q9BXK5 485 aa10.07□□□□□ -0.8
ATP2C1-208ENST00000504948 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 MSNP26038 577 aaKnown RBP10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 CCNB3Q8WWL7 1395 aa10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 DNMT1P26358 1616 aaKnown RBP10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 KIAA1107Q9UPP5 1409 aa10.06□□□□□ -0.8
ATP2C1-208ENST00000504948 MYO3AQ8NEV4 1616 aa10.05□□□□□ -0.8
ATP2C1-208ENST00000504948 CDCA7LQ96GN5 454 aa10.05□□□□□ -0.8
ATP2C1-208ENST00000504948 APBB1O00213 710 aa10.05□□□□□ -0.8
ATP2C1-208ENST00000504948 PIK3C2BO00750 1634 aa10.04□□□□□ -0.8
ATP2C1-208ENST00000504948 CARD11Q9BXL7 1154 aa10.04□□□□□ -0.8
ATP2C1-208ENST00000504948 PRKRIP1Q9H875 184 aaPredicted RBP10.04□□□□□ -0.8
ATP2C1-208ENST00000504948 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
ATP2C1-208ENST00000504948 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
ATP2C1-208ENST00000504948 PRDM15P57071 1507 aaPredicted RBP10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 CD109Q6YHK3 1445 aa10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 UNC13BO14795 1591 aa10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 GPATCH8Q9UKJ3 1502 aaKnown RBP10.03□□□□□ -0.8
ATP2C1-208ENST00000504948 FBLN2P98095 1184 aa10.02□□□□□ -0.8
ATP2C1-208ENST00000504948 GCC2Q8IWJ2 1684 aa10.02□□□□□ -0.81
ATP2C1-208ENST00000504948 FANCAO15360 1455 aa10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 NOL8Q76FK4 1167 aaKnown RBP10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 L3MBTL2Q969R5 705 aa10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 ZHX1Q9UKY1 873 aaPredicted RBP10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 ZNF518AQ6AHZ1 1483 aa10.01□□□□□ -0.81
ATP2C1-208ENST00000504948 LMTK3Q96Q04 1460 aa9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 XIRP1Q702N8 1843 aaKnown RBP9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 RTEL1-TNFRSF6BF6WH68 1400 aa9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 ATP7AQ04656 1500 aa9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 PTPN23Q9H3S7 1636 aa9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 MTUS2Q5JR59 1369 aa9.99□□□□□ -0.81
ATP2C1-208ENST00000504948 RRP1P56182 461 aaKnown RBP9.98□□□□□ -0.81
ATP2C1-208ENST00000504948 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
ATP2C1-208ENST00000504948 CAMSAP1Q5T5Y3 1602 aa9.98□□□□□ -0.81
ATP2C1-208ENST00000504948 CLTCQ00610 1675 aaKnown RBP9.98□□□□□ -0.81
ATP2C1-208ENST00000504948 GOLGA6L22H0YM25 854 aa9.97□□□□□ -0.81
ATP2C1-208ENST00000504948 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
ATP2C1-208ENST00000504948 ADGRL2O95490 1459 aa9.96□□□□□ -0.81
ATP2C1-208ENST00000504948 SPATA31D1Q6ZQQ2 1576 aa9.96□□□□□ -0.81
ATP2C1-208ENST00000504948 FTSJ3Q8IY81 847 aaKnown RBP9.96□□□□□ -0.82
ATP2C1-208ENST00000504948 WASHC2AQ641Q2 1341 aa9.96□□□□□ -0.82
ATP2C1-208ENST00000504948 SETD1AO15047 1707 aaKnown RBP9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 C9orf84Q5VXU9 1444 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 UBR1Q8IWV7 1749 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 NEURL4Q96JN8 1562 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 HSCBQ8IWL3 235 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 IQGAP3Q86VI3 1631 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 IFT172Q9UG01 1749 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
ATP2C1-208ENST00000504948 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
ATP2C1-208ENST00000504948 DENND4BO75064 1496 aaPredicted RBP9.94□□□□□ -0.82
ATP2C1-208ENST00000504948 DCAF11Q8TEB1 546 aa9.94□□□□□ -0.82
ATP2C1-208ENST00000504948 FAM43AQ8N2R8 423 aa9.94□□□□□ -0.82
ATP2C1-208ENST00000504948 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
ATP2C1-208ENST00000504948 RNF214Q8ND24 703 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 SETD5Q9C0A6 1442 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 ATP10AO60312 1499 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 CEP152O94986 1710 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 PTPRMP28827 1452 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
ATP2C1-208ENST00000504948 IQSEC2Q5JU85 1478 aa9.92□□□□□ -0.82
ATP2C1-208ENST00000504948 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
ATP2C1-208ENST00000504948 IGSF3O75054 1194 aa9.92□□□□□ -0.82
ATP2C1-208ENST00000504948 STRCP1A6NGW2 1772 aa9.92□□□□□ -0.82
ATP2C1-208ENST00000504948 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
ATP2C1-208ENST00000504948 UGGT1Q9NYU2 1555 aa9.91□□□□□ -0.82
ATP2C1-208ENST00000504948 C20orf194Q5TEA3 1177 aa9.91□□□□□ -0.82
ATP2C1-208ENST00000504948 ALKQ9UM73 1620 aa9.91□□□□□ -0.82
ATP2C1-208ENST00000504948 DDX49Q9Y6V7 483 aaKnown RBP9.9□□□□□ -0.83
ATP2C1-208ENST00000504948 RRAGDQ9NQL2 400 aaPredicted RBP9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 NPATQ14207 1427 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 LAMC1P11047 1609 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 MIA2Q96PC5 1412 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 KNSTRNQ9Y448 316 aa9.89□□□□□ -0.83
ATP2C1-208ENST00000504948 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
ATP2C1-208ENST00000504948 TRERF1Q96PN7 1200 aa9.88□□□□□ -0.83
ATP2C1-208ENST00000504948 NWD1Q149M9 1564 aa9.88□□□□□ -0.83
ATP2C1-208ENST00000504948 TET3O43151 1660 aa9.88□□□□□ -0.83
ATP2C1-208ENST00000504948 YEATS2Q9ULM3 1422 aa9.87□□□□□ -0.83
ATP2C1-208ENST00000504948 SETD1BQ9UPS6 1966 aaKnown RBP9.87□□□□□ -0.83
ATP2C1-208ENST00000504948 SYNMO15061 1565 aa9.87□□□□□ -0.83
ATP2C1-208ENST00000504948 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
ATP2C1-208ENST00000504948 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
ATP2C1-208ENST00000504948 TRAK2O60296 914 aa9.86□□□□□ -0.83
ATP2C1-208ENST00000504948 U2SURPO15042 1029 aaKnown RBP9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 ARHGAP5Q13017 1502 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms