RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 TIE1P35590 1138 aa13.71□□□□□ -0.22
CDH6-202ENST00000504835 ARHGEF5Q12774 1597 aa13.7□□□□□ -0.22
CDH6-202ENST00000504835 KDM5DQ9BY66 1539 aa13.7□□□□□ -0.22
CDH6-202ENST00000504835 MIER1Q8N108 512 aa13.7□□□□□ -0.22
CDH6-202ENST00000504835 BMP2KQ9NSY1 1161 aaPredicted RBP13.7□□□□□ -0.22
CDH6-202ENST00000504835 PKD2Q13563 968 aa13.69□□□□□ -0.22
CDH6-202ENST00000504835 FAM135AQ9P2D6 1515 aa13.69□□□□□ -0.22
CDH6-202ENST00000504835 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
CDH6-202ENST00000504835 PZPP20742 1482 aa13.68□□□□□ -0.22
CDH6-202ENST00000504835 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
CDH6-202ENST00000504835 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
CDH6-202ENST00000504835 MAP3K13O43283 966 aa13.66□□□□□ -0.22
CDH6-202ENST00000504835 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
CDH6-202ENST00000504835 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
CDH6-202ENST00000504835 TNRQ92752 1358 aa13.65□□□□□ -0.22
CDH6-202ENST00000504835 KIF3BO15066 747 aa13.65□□□□□ -0.22
CDH6-202ENST00000504835 CEP152O94986 1710 aa13.65□□□□□ -0.22
CDH6-202ENST00000504835 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
CDH6-202ENST00000504835 STRCP1A6NGW2 1772 aa13.64□□□□□ -0.23
CDH6-202ENST00000504835 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
CDH6-202ENST00000504835 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
CDH6-202ENST00000504835 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
CDH6-202ENST00000504835 SOCS7O14512 581 aa13.63□□□□□ -0.23
CDH6-202ENST00000504835 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
CDH6-202ENST00000504835 SEC24BO95487 1268 aa13.62□□□□□ -0.23
CDH6-202ENST00000504835 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
CDH6-202ENST00000504835 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
CDH6-202ENST00000504835 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
CDH6-202ENST00000504835 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
CDH6-202ENST00000504835 ALKQ9UM73 1620 aa13.61□□□□□ -0.23
CDH6-202ENST00000504835 ABCC3O15438 1527 aa13.61□□□□□ -0.23
CDH6-202ENST00000504835 TRPC6Q9Y210 931 aa13.61□□□□□ -0.23
CDH6-202ENST00000504835 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 CPS1P31327 1500 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 NLRP1Q9C000 1473 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 SHANK2Q9UPX8 1470 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 RSPH4AQ5TD94 716 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
CDH6-202ENST00000504835 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
CDH6-202ENST00000504835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDH6-202ENST00000504835 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
CDH6-202ENST00000504835 LCE2DQ5TA82 110 aaPredicted RBP13.59□□□□□ -0.23
CDH6-202ENST00000504835 MED14O60244 1454 aa13.59□□□□□ -0.23
CDH6-202ENST00000504835 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
CDH6-202ENST00000504835 TTLL13PA6NNM8 815 aa13.58□□□□□ -0.24
CDH6-202ENST00000504835 SGIP1Q9BQI5 828 aa13.58□□□□□ -0.24
CDH6-202ENST00000504835 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
CDH6-202ENST00000504835 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
CDH6-202ENST00000504835 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
CDH6-202ENST00000504835 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
CDH6-202ENST00000504835 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
CDH6-202ENST00000504835 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
CDH6-202ENST00000504835 MED1Q15648 1581 aaPredicted RBP13.55□□□□□ -0.24
CDH6-202ENST00000504835 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
CDH6-202ENST00000504835 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
CDH6-202ENST00000504835 IER5LQ5T953 404 aa13.55□□□□□ -0.24
CDH6-202ENST00000504835 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
CDH6-202ENST00000504835 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
CDH6-202ENST00000504835 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
CDH6-202ENST00000504835 ANKLE2Q86XL3 938 aa13.54□□□□□ -0.24
CDH6-202ENST00000504835 THEMISQ8N1K5 641 aaPredicted RBP13.54□□□□□ -0.24
CDH6-202ENST00000504835 HSPA1LP34931 641 aa13.53□□□□□ -0.24
CDH6-202ENST00000504835 SYNMO15061 1565 aa13.53□□□□□ -0.24
CDH6-202ENST00000504835 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.24
CDH6-202ENST00000504835 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.24
CDH6-202ENST00000504835 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
CDH6-202ENST00000504835 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
CDH6-202ENST00000504835 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
CDH6-202ENST00000504835 PTPN23Q9H3S7 1636 aa13.51□□□□□ -0.25
CDH6-202ENST00000504835 TRIM35Q9UPQ4 493 aa13.5□□□□□ -0.25
CDH6-202ENST00000504835 LRRC7Q96NW7 1537 aa13.5□□□□□ -0.25
CDH6-202ENST00000504835 PIK3C2BO00750 1634 aa13.5□□□□□ -0.25
CDH6-202ENST00000504835 TOM1O60784 492 aa13.49□□□□□ -0.25
CDH6-202ENST00000504835 ARHGAP23Q9P227 1491 aa13.48□□□□□ -0.25
CDH6-202ENST00000504835 SLIT1O75093 1534 aa13.48□□□□□ -0.25
CDH6-202ENST00000504835 ABCC5O15440 1437 aa13.48□□□□□ -0.25
CDH6-202ENST00000504835 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.25
CDH6-202ENST00000504835 KIF15Q9NS87 1388 aa13.46□□□□□ -0.25
CDH6-202ENST00000504835 ERBINQ96RT1 1412 aa13.46□□□□□ -0.26
CDH6-202ENST00000504835 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.26
CDH6-202ENST00000504835 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
CDH6-202ENST00000504835 LTKP29376 864 aa13.44□□□□□ -0.26
CDH6-202ENST00000504835 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
CDH6-202ENST00000504835 DAPK1P53355 1430 aa13.44□□□□□ -0.26
CDH6-202ENST00000504835 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
CDH6-202ENST00000504835 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
CDH6-202ENST00000504835 RRP7BPQ9NSQ0 103 aa13.41□□□□□ -0.26
CDH6-202ENST00000504835 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
CDH6-202ENST00000504835 NUBP1P53384 320 aa13.41□□□□□ -0.26
CDH6-202ENST00000504835 TET3O43151 1660 aa13.39□□□□□ -0.27
CDH6-202ENST00000504835 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
CDH6-202ENST00000504835 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
CDH6-202ENST00000504835 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
CDH6-202ENST00000504835 PLCG2P16885 1265 aa13.38□□□□□ -0.27
CDH6-202ENST00000504835 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
CDH6-202ENST00000504835 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
CDH6-202ENST00000504835 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
CDH6-202ENST00000504835 TMEM2Q9UHN6 1383 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms