RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
RFC1-206ENST00000503784 UBR1Q8IWV7 1749 aa11.21□□□□□ -0.62
RFC1-206ENST00000503784 SLIT1O75093 1534 aa11.2□□□□□ -0.62
RFC1-206ENST00000503784 MSH6P52701 1360 aa11.2□□□□□ -0.62
RFC1-206ENST00000503784 RXRBP28702 533 aa11.2□□□□□ -0.62
RFC1-206ENST00000503784 EVX2Q03828 476 aa11.2□□□□□ -0.62
RFC1-206ENST00000503784 SLC26A8Q96RN1 970 aa11.2□□□□□ -0.62
RFC1-206ENST00000503784 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
RFC1-206ENST00000503784 KCNA6P17658 529 aa11.19□□□□□ -0.62
RFC1-206ENST00000503784 SLAIN2Q9P270 581 aa11.19□□□□□ -0.62
RFC1-206ENST00000503784 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
RFC1-206ENST00000503784 SPATA31A6Q5VVP1 1343 aa11.17□□□□□ -0.62
RFC1-206ENST00000503784 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
RFC1-206ENST00000503784 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
RFC1-206ENST00000503784 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
RFC1-206ENST00000503784 PRDM15P57071 1507 aaPredicted RBP11.17□□□□□ -0.62
RFC1-206ENST00000503784 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
RFC1-206ENST00000503784 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
RFC1-206ENST00000503784 EHBP1L1Q8N3D4 1523 aa11.15□□□□□ -0.62
RFC1-206ENST00000503784 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
RFC1-206ENST00000503784 TSPY4P0CV99 314 aa11.15□□□□□ -0.62
RFC1-206ENST00000503784 TSPY10P0CW01 314 aa11.15□□□□□ -0.62
RFC1-206ENST00000503784 BCANQ96GW7 911 aa11.15□□□□□ -0.62
RFC1-206ENST00000503784 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
RFC1-206ENST00000503784 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
RFC1-206ENST00000503784 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
RFC1-206ENST00000503784 MROH1Q8NDA8 1641 aa11.13□□□□□ -0.63
RFC1-206ENST00000503784 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
RFC1-206ENST00000503784 AFF2P51816 1311 aa11.13□□□□□ -0.63
RFC1-206ENST00000503784 CEP152O94986 1710 aa11.13□□□□□ -0.63
RFC1-206ENST00000503784 RGS12O14924 1447 aa11.13□□□□□ -0.63
RFC1-206ENST00000503784 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
RFC1-206ENST00000503784 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
RFC1-206ENST00000503784 PIK3C2BO00750 1634 aa11.12□□□□□ -0.63
RFC1-206ENST00000503784 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
RFC1-206ENST00000503784 EFCAB6Q5THR3 1501 aa11.11□□□□□ -0.63
RFC1-206ENST00000503784 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
RFC1-206ENST00000503784 TET3O43151 1660 aa11.09□□□□□ -0.63
RFC1-206ENST00000503784 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
RFC1-206ENST00000503784 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
RFC1-206ENST00000503784 SETBP1Q9Y6X0 1596 aa11.08□□□□□ -0.64
RFC1-206ENST00000503784 C8orf37Q96NL8 207 aa11.08□□□□□ -0.64
RFC1-206ENST00000503784 ARHGAP31Q2M1Z3 1444 aa11.08□□□□□ -0.64
RFC1-206ENST00000503784 KDM5AP29375 1690 aaKnown RBP11.08□□□□□ -0.64
RFC1-206ENST00000503784 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
RFC1-206ENST00000503784 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
RFC1-206ENST00000503784 IDI1Q13907 227 aa11.07□□□□□ -0.64
RFC1-206ENST00000503784 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
RFC1-206ENST00000503784 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
RFC1-206ENST00000503784 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
RFC1-206ENST00000503784 QTRT2Q9H974 415 aaKnown RBP11.06□□□□□ -0.64
RFC1-206ENST00000503784 PPP1R15AO75807 674 aaPredicted RBP11.05□□□□□ -0.64
RFC1-206ENST00000503784 ATF3P18847 181 aa11.05□□□□□ -0.64
RFC1-206ENST00000503784 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
RFC1-206ENST00000503784 BRINP3Q76B58 766 aa11.04□□□□□ -0.64
RFC1-206ENST00000503784 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
RFC1-206ENST00000503784 ADGRB3O60242 1522 aa11.04□□□□□ -0.64
RFC1-206ENST00000503784 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
RFC1-206ENST00000503784 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
RFC1-206ENST00000503784 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
RFC1-206ENST00000503784 RRP7BPQ9NSQ0 103 aa11.02□□□□□ -0.65
RFC1-206ENST00000503784 KANK1Q14678 1352 aa11.02□□□□□ -0.65
RFC1-206ENST00000503784 ADAMTS2O95450 1211 aa11.01□□□□□ -0.65
RFC1-206ENST00000503784 C19orf44Q9H6X5 657 aa11.01□□□□□ -0.65
RFC1-206ENST00000503784 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
RFC1-206ENST00000503784 PLEKHG1Q9ULL1 1385 aa11.01□□□□□ -0.65
RFC1-206ENST00000503784 NGLY1Q96IV0 654 aa11□□□□□ -0.65
RFC1-206ENST00000503784 ERBINQ96RT1 1412 aa11□□□□□ -0.65
RFC1-206ENST00000503784 NCOA3Q9Y6Q9 1424 aa11□□□□□ -0.65
RFC1-206ENST00000503784 ASXL1Q8IXJ9 1541 aa10.99□□□□□ -0.65
RFC1-206ENST00000503784 DDX17Q92841 729 aaKnown RBP10.99□□□□□ -0.65
RFC1-206ENST00000503784 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
RFC1-206ENST00000503784 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
RFC1-206ENST00000503784 PNPLA6Q8IY17 1366 aa10.98□□□□□ -0.65
RFC1-206ENST00000503784 ZFYVE9O95405 1425 aa10.98□□□□□ -0.65
RFC1-206ENST00000503784 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
RFC1-206ENST00000503784 NOS1P29475 1434 aa10.97□□□□□ -0.65
RFC1-206ENST00000503784 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
RFC1-206ENST00000503784 LRRC59Q96AG4 307 aaKnown RBP10.96□□□□□ -0.65
RFC1-206ENST00000503784 USP21Q9UK80 565 aa10.96□□□□□ -0.65
RFC1-206ENST00000503784 TBX22Q9Y458 520 aa10.96□□□□□ -0.65
RFC1-206ENST00000503784 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
RFC1-206ENST00000503784 SLC52A1Q9NWF4 448 aa10.95□□□□□ -0.66
RFC1-206ENST00000503784 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
RFC1-206ENST00000503784 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
RFC1-206ENST00000503784 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
RFC1-206ENST00000503784 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
RFC1-206ENST00000503784 MST1RQ04912 1400 aa10.93□□□□□ -0.66
RFC1-206ENST00000503784 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
RFC1-206ENST00000503784 HDGFP51858 240 aaKnown RBP10.93□□□□□ -0.66
RFC1-206ENST00000503784 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
RFC1-206ENST00000503784 ABCC5O15440 1437 aa10.92□□□□□ -0.66
RFC1-206ENST00000503784 DCCP43146 1447 aa10.92□□□□□ -0.66
RFC1-206ENST00000503784 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
RFC1-206ENST00000503784 EP400Q96L91 3159 aa10.91□□□□□ -0.66
RFC1-206ENST00000503784 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
RFC1-206ENST00000503784 DEFB132Q7Z7B7 95 aa10.91□□□□□ -0.66
RFC1-206ENST00000503784 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
RFC1-206ENST00000503784 ATRNO75882 1429 aa10.91□□□□□ -0.66
RFC1-206ENST00000503784 NHSL1Q5SYE7 1610 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms