RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 RGL3Q3MIN7 710 aa8.5□□□□□ -1.05
LINC00939-201ENST00000502479 ASXL2Q76L83 1435 aa8.49□□□□□ -1.05
LINC00939-201ENST00000502479 TRAPPC8Q9Y2L5 1435 aa8.49□□□□□ -1.05
LINC00939-201ENST00000502479 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
LINC00939-201ENST00000502479 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
LINC00939-201ENST00000502479 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
LINC00939-201ENST00000502479 PNISRQ8TF01 805 aaKnown RBP8.49□□□□□ -1.05
LINC00939-201ENST00000502479 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
LINC00939-201ENST00000502479 PIK3C2GO75747 1445 aa8.48□□□□□ -1.05
LINC00939-201ENST00000502479 CFAP53Q96M91 514 aa8.48□□□□□ -1.05
LINC00939-201ENST00000502479 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
LINC00939-201ENST00000502479 AAMPQ13685 434 aa8.48□□□□□ -1.05
LINC00939-201ENST00000502479 POGZQ7Z3K3 1410 aa8.47□□□□□ -1.05
LINC00939-201ENST00000502479 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
LINC00939-201ENST00000502479 MLH3Q9UHC1 1453 aa8.47□□□□□ -1.05
LINC00939-201ENST00000502479 TCERG1O14776 1098 aaKnown RBP8.47□□□□□ -1.05
LINC00939-201ENST00000502479 PUS7Q96PZ0 661 aaKnown RBP8.47□□□□□ -1.05
LINC00939-201ENST00000502479 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
LINC00939-201ENST00000502479 RCAN3Q9UKA8 241 aa8.47□□□□□ -1.05
LINC00939-201ENST00000502479 NSD2O96028 1365 aa8.47□□□□□ -1.05
LINC00939-201ENST00000502479 RRP1P56182 461 aaKnown RBP8.46□□□□□ -1.05
LINC00939-201ENST00000502479 IFT172Q9UG01 1749 aa8.46□□□□□ -1.06
LINC00939-201ENST00000502479 USP32Q8NFA0 1604 aa8.46□□□□□ -1.06
LINC00939-201ENST00000502479 PANK3Q9H999 370 aa8.46□□□□□ -1.06
LINC00939-201ENST00000502479 ADGRB3O60242 1522 aa8.46□□□□□ -1.06
LINC00939-201ENST00000502479 KIF3BO15066 747 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 CD109Q6YHK3 1445 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 MS4A1P11836 297 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 CAMSAP1Q5T5Y3 1602 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 PLA2R1Q13018 1463 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 RNF123Q5XPI4 1314 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 PPP6R1Q9UPN7 881 aa8.45□□□□□ -1.06
LINC00939-201ENST00000502479 CC2D1BQ5T0F9 858 aaKnown RBP8.44□□□□□ -1.06
LINC00939-201ENST00000502479 CGNL1Q0VF96 1302 aa8.44□□□□□ -1.06
LINC00939-201ENST00000502479 DISP3Q9P2K9 1392 aa8.44□□□□□ -1.06
LINC00939-201ENST00000502479 NRXN1Q9ULB1 1477 aa8.44□□□□□ -1.06
LINC00939-201ENST00000502479 SBNO2Q9Y2G9 1366 aa8.44□□□□□ -1.06
LINC00939-201ENST00000502479 ABCA6Q8N139 1617 aa8.43□□□□□ -1.06
LINC00939-201ENST00000502479 GLI2P10070 1586 aa8.43□□□□□ -1.06
LINC00939-201ENST00000502479 EIF5BO60841 1220 aaKnown RBP8.43□□□□□ -1.06
LINC00939-201ENST00000502479 NCBP3Q53F19 620 aaKnown RBP8.43□□□□□ -1.06
LINC00939-201ENST00000502479 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
LINC00939-201ENST00000502479 PPRC1Q5VV67 1664 aaKnown RBP8.42□□□□□ -1.06
LINC00939-201ENST00000502479 NEFMP07197 916 aa8.41□□□□□ -1.06
LINC00939-201ENST00000502479 EVC2Q86UK5 1308 aa8.41□□□□□ -1.06
LINC00939-201ENST00000502479 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
LINC00939-201ENST00000502479 E9PSI1 815 aa8.41□□□□□ -1.06
LINC00939-201ENST00000502479 GOLGA2Q08379 1002 aa8.41□□□□□ -1.06
LINC00939-201ENST00000502479 PPLO60437 1756 aa8.41□□□□□ -1.06
LINC00939-201ENST00000502479 CENPJQ9HC77 1338 aaPredicted RBP8.4□□□□□ -1.06
LINC00939-201ENST00000502479 KIDINS220Q9ULH0 1771 aa8.4□□□□□ -1.06
LINC00939-201ENST00000502479 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
LINC00939-201ENST00000502479 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.06
LINC00939-201ENST00000502479 IRX6P78412 446 aaPredicted RBP8.4□□□□□ -1.07
LINC00939-201ENST00000502479 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.07
LINC00939-201ENST00000502479 PPP2R1AP30153 589 aa8.4□□□□□ -1.07
LINC00939-201ENST00000502479 MROH1Q8NDA8 1641 aa8.39□□□□□ -1.07
LINC00939-201ENST00000502479 ARHGAP31Q2M1Z3 1444 aa8.39□□□□□ -1.07
LINC00939-201ENST00000502479 ABCC3O15438 1527 aa8.39□□□□□ -1.07
LINC00939-201ENST00000502479 CNGB1Q14028 1251 aaPredicted RBP8.39□□□□□ -1.07
LINC00939-201ENST00000502479 NOP58Q9Y2X3 529 aaKnown RBP8.39□□□□□ -1.07
LINC00939-201ENST00000502479 TESK2Q96S53 571 aa8.39□□□□□ -1.07
LINC00939-201ENST00000502479 ZBTB47Q9UFB7 747 aaPredicted RBP8.39□□□□□ -1.07
LINC00939-201ENST00000502479 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
LINC00939-201ENST00000502479 NBPF1Q3BBV0 1214 aa8.38□□□□□ -1.07
LINC00939-201ENST00000502479 CENPQQ7L2Z9 268 aaPredicted RBP8.38□□□□□ -1.07
LINC00939-201ENST00000502479 MORC1Q86VD1 984 aa8.38□□□□□ -1.07
LINC00939-201ENST00000502479 UGGT1Q9NYU2 1555 aa8.38□□□□□ -1.07
LINC00939-201ENST00000502479 CCDC184Q52MB2 194 aa8.38□□□□□ -1.07
LINC00939-201ENST00000502479 SLC52A1Q9NWF4 448 aa8.38□□□□□ -1.07
LINC00939-201ENST00000502479 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 MYOM1P52179 1685 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 AFAP1Q8N556 730 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 POLR3AO14802 1390 aaPredicted RBP8.37□□□□□ -1.07
LINC00939-201ENST00000502479 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
LINC00939-201ENST00000502479 NKTRP30414 1462 aaKnown RBP8.37□□□□□ -1.07
LINC00939-201ENST00000502479 REREQ9P2R6 1566 aa8.36□□□□□ -1.07
LINC00939-201ENST00000502479 CT47B1P0C2W7 299 aaPredicted RBP8.36□□□□□ -1.07
LINC00939-201ENST00000502479 NOS1P29475 1434 aa8.36□□□□□ -1.07
LINC00939-201ENST00000502479 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
LINC00939-201ENST00000502479 ATAD2Q6PL18 1390 aa8.36□□□□□ -1.07
LINC00939-201ENST00000502479 PPM1GO15355 546 aaPredicted RBP8.36□□□□□ -1.07
LINC00939-201ENST00000502479 C14orf93Q9H972 538 aaKnown RBP8.35□□□□□ -1.07
LINC00939-201ENST00000502479 HDGFL2Q7Z4V5 671 aaPredicted RBP8.35□□□□□ -1.07
LINC00939-201ENST00000502479 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC00939-201ENST00000502479 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
LINC00939-201ENST00000502479 CALD1Q05682 793 aaKnown RBP8.35□□□□□ -1.07
LINC00939-201ENST00000502479 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
LINC00939-201ENST00000502479 PIK3C2BO00750 1634 aa8.35□□□□□ -1.07
LINC00939-201ENST00000502479 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
LINC00939-201ENST00000502479 PMFBP1Q8TBY8 1022 aa8.34□□□□□ -1.07
LINC00939-201ENST00000502479 STAG3Q9UJ98 1225 aa8.34□□□□□ -1.07
LINC00939-201ENST00000502479 DIP2CQ9Y2E4 1556 aa8.34□□□□□ -1.07
LINC00939-201ENST00000502479 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
LINC00939-201ENST00000502479 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
LINC00939-201ENST00000502479 ANKRD36BQ8N2N9 1353 aa8.34□□□□□ -1.07
LINC00939-201ENST00000502479 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
LINC00939-201ENST00000502479 UPF2Q9HAU5 1272 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms