RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ZNF326Q5BKZ1 582 aaKnown RBP5.18□□□□□ -1.58
SUB1-202ENST00000502453 CHRDL2Q6WN34 429 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 CFAP70Q5T0N1 1121 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 CRISPLD2Q9H0B8 497 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 DPH6Q7L8W6 267 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 EXOC8Q8IYI6 725 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 MTMR14Q8NCE2 650 aa5.18□□□□□ -1.58
SUB1-202ENST00000502453 PLEKHD1A6NEE1 506 aa5.17□□□□□ -1.58
SUB1-202ENST00000502453 TPD52L2O43399 206 aaKnown RBP5.17□□□□□ -1.58
SUB1-202ENST00000502453 PEX14O75381 377 aa5.17□□□□□ -1.58
SUB1-202ENST00000502453 VTI1AQ96AJ9 217 aa5.17□□□□□ -1.58
SUB1-202ENST00000502453 SF3A1Q15459 793 aaKnown RBP5.17□□□□□ -1.58
SUB1-202ENST00000502453 CENPBP07199 599 aaPredicted RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 ZC3H4Q9UPT8 1303 aaKnown RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 SSTR3P32745 418 aaPredicted RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 FAM50AQ14320 339 aaKnown RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 HIC1Q14526 733 aa5.16□□□□□ -1.58
SUB1-202ENST00000502453 TSNAXIP1Q2TAA8 658 aa5.16□□□□□ -1.58
SUB1-202ENST00000502453 C9orf131Q5VYM1 1079 aa5.16□□□□□ -1.58
SUB1-202ENST00000502453 BIN2Q9UBW5 565 aaPredicted RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 CCER1Q8TC90 406 aaPredicted RBP5.16□□□□□ -1.58
SUB1-202ENST00000502453 ADAMTS19Q8TE59 1207 aa5.16□□□□□ -1.58
SUB1-202ENST00000502453 C8orf37Q96NL8 207 aa5.16□□□□□ -1.58
SUB1-202ENST00000502453 DNAJC14Q6Y2X3 702 aaPredicted RBP5.15□□□□□ -1.58
SUB1-202ENST00000502453 TEX2Q8IWB9 1127 aa5.15□□□□□ -1.58
SUB1-202ENST00000502453 PPP1R12CQ9BZL4 782 aa5.15□□□□□ -1.58
SUB1-202ENST00000502453 ZEB1P37275 1124 aaPredicted RBP5.15□□□□□ -1.58
SUB1-202ENST00000502453 ZNF579Q8NAF0 562 aaKnown RBP5.15□□□□□ -1.58
SUB1-202ENST00000502453 KLHL42Q9P2K6 505 aa5.15□□□□□ -1.58
SUB1-202ENST00000502453 TMEM88BA6NKF7 163 aa5.15□□□□□ -1.59
SUB1-202ENST00000502453 CLK2P49760 499 aaKnown RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 EVX2Q03828 476 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 FBXO31Q5XUX0 539 aaPredicted RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 NAP1L5Q96NT1 182 aaPredicted RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.14□□□□□ -1.59
SUB1-202ENST00000502453 CSPP1Q1MSJ5 1256 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 NLRP7Q8WX94 980 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 EMILIN3Q9NT22 766 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 PALM3A6NDB9 673 aaPredicted RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 SOX12O15370 315 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 TAGLNQ01995 201 aaKnown RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 PDIA6Q15084 440 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 PPP1R15BQ5SWA1 713 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 PRM3Q9NNZ6 103 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 ZRANB1Q9UGI0 708 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 SUGT1Q9Y2Z0 365 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 FCHSD2O94868 740 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 ERCC5P28715 1186 aaPredicted RBP5.14□□□□□ -1.59
SUB1-202ENST00000502453 MYSM1Q5VVJ2 828 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 PLCD4Q9BRC7 762 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 SLC52A1Q9NWF4 448 aa5.14□□□□□ -1.59
SUB1-202ENST00000502453 MARSP56192 900 aaKnown RBP5.13□□□□□ -1.59
SUB1-202ENST00000502453 DPY19L2Q6NUT2 758 aa5.13□□□□□ -1.59
SUB1-202ENST00000502453 MS4A3Q96HJ5 214 aa5.13□□□□□ -1.59
SUB1-202ENST00000502453 CLCN1P35523 988 aa5.13□□□□□ -1.59
SUB1-202ENST00000502453 SRPK2P78362 688 aaKnown RBP5.13□□□□□ -1.59
SUB1-202ENST00000502453 NOM1Q5C9Z4 860 aaKnown RBP5.13□□□□□ -1.59
SUB1-202ENST00000502453 BANK1Q8NDB2 785 aa5.13□□□□□ -1.59
SUB1-202ENST00000502453 CD44P16070 742 aaKnown RBP5.13□□□□□ -1.59
SUB1-202ENST00000502453 TBC1D2Q9BYX2 928 aa5.13□□□□□ -1.59
SUB1-202ENST00000502453 GNEQ9Y223 722 aaKnown RBP5.13□□□□□ -1.59
SUB1-202ENST00000502453 ANAPC15P60006 121 aa5.12□□□□□ -1.59
SUB1-202ENST00000502453 TANGO6Q9C0B7 1094 aa5.12□□□□□ -1.59
SUB1-202ENST00000502453 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
SUB1-202ENST00000502453 ANKRD33BA6NCL7 494 aa5.12□□□□□ -1.59
SUB1-202ENST00000502453 PTMSP20962 102 aa5.12□□□□□ -1.59
SUB1-202ENST00000502453 FOXD4L6Q3SYB3 417 aaPredicted RBP5.12□□□□□ -1.59
SUB1-202ENST00000502453 FOXD4L3Q6VB84 417 aaPredicted RBP5.12□□□□□ -1.59
SUB1-202ENST00000502453 GPCPD1Q9NPB8 672 aa5.12□□□□□ -1.59
SUB1-202ENST00000502453 CDCA7Q9BWT1 371 aaPredicted RBP5.12□□□□□ -1.59
SUB1-202ENST00000502453 TFIP11Q9UBB9 837 aaKnown RBP5.12□□□□□ -1.59
SUB1-202ENST00000502453 MAP4K4O95819 1239 aaPredicted RBP5.11□□□□□ -1.59
SUB1-202ENST00000502453 B4GALNT3Q6L9W6 998 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 hCG_2014768A0A024R1R8 64 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 SPDYE16A6NNV3 312 aaPredicted RBP5.11□□□□□ -1.59
SUB1-202ENST00000502453 HSP90AB4PQ58FF6 505 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 RBM46Q8TBY0 533 aaKnown RBP5.11□□□□□ -1.59
SUB1-202ENST00000502453 GPATCH3Q96I76 525 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 SBNO2Q9Y2G9 1366 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 AP1G2O75843 785 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 SERPINB4P48594 390 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 VAC14Q08AM6 782 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 TMEM259Q4ZIN3 620 aa5.11□□□□□ -1.59
SUB1-202ENST00000502453 ERCC3P19447 782 aa5.1□□□□□ -1.59
SUB1-202ENST00000502453 IQSEC3Q9UPP2 1182 aaPredicted RBP5.1□□□□□ -1.59
SUB1-202ENST00000502453 DHX38Q92620 1227 aaKnown RBP5.1□□□□□ -1.59
SUB1-202ENST00000502453 DDX12PQ92771 950 aa5.1□□□□□ -1.59
SUB1-202ENST00000502453 GTF2F1P35269 517 aaKnown RBP eCLIP5.1□□□□□ -1.59
SUB1-202ENST00000502453 APBB1IPQ7Z5R6 666 aaPredicted RBP5.1□□□□□ -1.59
SUB1-202ENST00000502453 LNPKQ9C0E8 428 aa5.1□□□□□ -1.59
SUB1-202ENST00000502453 RECKO95980 971 aa5.09□□□□□ -1.59
SUB1-202ENST00000502453 IGBP1P78318 339 aa5.09□□□□□ -1.59
SUB1-202ENST00000502453 FAM9BQ8IZU0 186 aa5.09□□□□□ -1.59
SUB1-202ENST00000502453 TMEM106CQ9BVX2 250 aa5.09□□□□□ -1.59
SUB1-202ENST00000502453 RBM10P98175 930 aaKnown RBP5.09□□□□□ -1.59
SUB1-202ENST00000502453 GALR2O43603 387 aaPredicted RBP5.09□□□□□ -1.59
SUB1-202ENST00000502453 PMFBP1Q8TBY8 1022 aa5.09□□□□□ -1.6
SUB1-202ENST00000502453 LIMD1Q9UGP4 676 aa5.08□□□□□ -1.6
SUB1-202ENST00000502453 STK32AQ8WU08 396 aa5.08□□□□□ -1.6
SUB1-202ENST00000502453 PHOX2BQ99453 314 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms