RNA–Protein interactions for RNA: ENST00000498434.1

RTCB-206, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 4

Gene RTCB, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-206ENST00000498434 CFAP74Q9C0B2 1584 aa11.88□□□□□ -0.51
RTCB-206ENST00000498434 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
RTCB-206ENST00000498434 KDM6BO15054 1643 aa11.88□□□□□ -0.51
RTCB-206ENST00000498434 ERBINQ96RT1 1412 aa11.87□□□□□ -0.51
RTCB-206ENST00000498434 ABCC1P33527 1531 aa11.87□□□□□ -0.51
RTCB-206ENST00000498434 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
RTCB-206ENST00000498434 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
RTCB-206ENST00000498434 NUP155O75694 1391 aa11.87□□□□□ -0.51
RTCB-206ENST00000498434 ANKRD30BQ9BXX2 1392 aa11.87□□□□□ -0.51
RTCB-206ENST00000498434 FANCAO15360 1455 aa11.86□□□□□ -0.51
RTCB-206ENST00000498434 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
RTCB-206ENST00000498434 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
RTCB-206ENST00000498434 POTEB3A0JP26 581 aa11.85□□□□□ -0.51
RTCB-206ENST00000498434 POTEBQ6S5H4 581 aa11.85□□□□□ -0.51
RTCB-206ENST00000498434 PZPP20742 1482 aa11.84□□□□□ -0.51
RTCB-206ENST00000498434 PYGBP11216 843 aa11.84□□□□□ -0.51
RTCB-206ENST00000498434 HS3ST6Q96QI5 342 aa11.84□□□□□ -0.51
RTCB-206ENST00000498434 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
RTCB-206ENST00000498434 PKD2Q13563 968 aa11.83□□□□□ -0.52
RTCB-206ENST00000498434 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
RTCB-206ENST00000498434 ADGRL1O94910 1474 aa11.82□□□□□ -0.52
RTCB-206ENST00000498434 CD109Q6YHK3 1445 aa11.81□□□□□ -0.52
RTCB-206ENST00000498434 DENND4BO75064 1496 aaPredicted RBP11.81□□□□□ -0.52
RTCB-206ENST00000498434 UNC13BO14795 1591 aa11.8□□□□□ -0.52
RTCB-206ENST00000498434 KANK1Q14678 1352 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 SCAPERQ9BY12 1400 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 ZNF518AQ6AHZ1 1483 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
RTCB-206ENST00000498434 ARHGEF12Q9NZN5 1544 aa11.79□□□□□ -0.52
RTCB-206ENST00000498434 NEO1Q92859 1461 aa11.78□□□□□ -0.52
RTCB-206ENST00000498434 FAM135AQ9P2D6 1515 aa11.78□□□□□ -0.52
RTCB-206ENST00000498434 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
RTCB-206ENST00000498434 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.52
RTCB-206ENST00000498434 ATP7AQ04656 1500 aa11.76□□□□□ -0.53
RTCB-206ENST00000498434 ZFYVE16Q7Z3T8 1539 aa11.76□□□□□ -0.53
RTCB-206ENST00000498434 IQGAP3Q86VI3 1631 aa11.76□□□□□ -0.53
RTCB-206ENST00000498434 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
RTCB-206ENST00000498434 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
RTCB-206ENST00000498434 L3MBTL2Q969R5 705 aa11.76□□□□□ -0.53
RTCB-206ENST00000498434 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
RTCB-206ENST00000498434 AFAP1Q8N556 730 aa11.75□□□□□ -0.53
RTCB-206ENST00000498434 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
RTCB-206ENST00000498434 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
RTCB-206ENST00000498434 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
RTCB-206ENST00000498434 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
RTCB-206ENST00000498434 DHX29Q7Z478 1369 aaKnown RBP11.74□□□□□ -0.53
RTCB-206ENST00000498434 GLI2P10070 1586 aa11.74□□□□□ -0.53
RTCB-206ENST00000498434 ATP10AO60312 1499 aa11.73□□□□□ -0.53
RTCB-206ENST00000498434 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
RTCB-206ENST00000498434 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
RTCB-206ENST00000498434 MLH3Q9UHC1 1453 aa11.71□□□□□ -0.53
RTCB-206ENST00000498434 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.53
RTCB-206ENST00000498434 GOLGA2Q08379 1002 aa11.7□□□□□ -0.54
RTCB-206ENST00000498434 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
RTCB-206ENST00000498434 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
RTCB-206ENST00000498434 DEPDC5O75140 1603 aa11.69□□□□□ -0.54
RTCB-206ENST00000498434 KDM5CP41229 1560 aa11.69□□□□□ -0.54
RTCB-206ENST00000498434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
RTCB-206ENST00000498434 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
RTCB-206ENST00000498434 KIF3BO15066 747 aa11.67□□□□□ -0.54
RTCB-206ENST00000498434 A2MP01023 1474 aa11.67□□□□□ -0.54
RTCB-206ENST00000498434 MAP3K4Q9Y6R4 1608 aa11.67□□□□□ -0.54
RTCB-206ENST00000498434 ARID4BQ4LE39 1312 aaPredicted RBP11.66□□□□□ -0.54
RTCB-206ENST00000498434 TET3O43151 1660 aa11.66□□□□□ -0.54
RTCB-206ENST00000498434 PRDM15P57071 1507 aaPredicted RBP11.65□□□□□ -0.54
RTCB-206ENST00000498434 ANP32CO43423 234 aa11.65□□□□□ -0.54
RTCB-206ENST00000498434 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
RTCB-206ENST00000498434 KIDINS220Q9ULH0 1771 aa11.64□□□□□ -0.55
RTCB-206ENST00000498434 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
RTCB-206ENST00000498434 FAM69CQ0P6D2 419 aa11.64□□□□□ -0.55
RTCB-206ENST00000498434 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
RTCB-206ENST00000498434 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
RTCB-206ENST00000498434 VWDEQ8N2E2 1590 aa11.63□□□□□ -0.55
RTCB-206ENST00000498434 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
RTCB-206ENST00000498434 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
RTCB-206ENST00000498434 BCORL1Q5H9F3 1711 aa11.63□□□□□ -0.55
RTCB-206ENST00000498434 PTPRTO14522 1441 aa11.62□□□□□ -0.55
RTCB-206ENST00000498434 TRPM2O94759 1503 aa11.62□□□□□ -0.55
RTCB-206ENST00000498434 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
RTCB-206ENST00000498434 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
RTCB-206ENST00000498434 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
RTCB-206ENST00000498434 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
RTCB-206ENST00000498434 ZNF326Q5BKZ1 582 aaKnown RBP11.61□□□□□ -0.55
RTCB-206ENST00000498434 DIP2BQ9P265 1576 aa11.61□□□□□ -0.55
RTCB-206ENST00000498434 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
RTCB-206ENST00000498434 GSE1Q14687 1217 aa11.6□□□□□ -0.55
RTCB-206ENST00000498434 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
RTCB-206ENST00000498434 PLA2R1Q13018 1463 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 ROCK2O75116 1388 aaKnown RBP11.59□□□□□ -0.55
RTCB-206ENST00000498434 USP47Q96K76 1375 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 CCER2I3L3R5 266 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 CHRM1P11229 460 aaPredicted RBP11.59□□□□□ -0.55
RTCB-206ENST00000498434 PSEN1P49768 467 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 SPATA31E1Q6ZUB1 1445 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 E9PCH4 1651 aa11.59□□□□□ -0.55
RTCB-206ENST00000498434 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms