RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 ABCA9Q8IUA7 1624 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 ST18O60284 1047 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 CROCC2H7BZ55 1655 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 GCC2Q8IWJ2 1684 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
CDC42-205ENST00000498236 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
CDC42-205ENST00000498236 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
CDC42-205ENST00000498236 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
CDC42-205ENST00000498236 SNPHO15079 494 aa11.29□□□□□ -0.6
CDC42-205ENST00000498236 EFCAB2Q5VUJ9 269 aa11.29□□□□□ -0.6
CDC42-205ENST00000498236 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
CDC42-205ENST00000498236 ADGBQ8N7X0 1667 aa11.29□□□□□ -0.6
CDC42-205ENST00000498236 NCOA1Q15788 1441 aa11.28□□□□□ -0.6
CDC42-205ENST00000498236 CCDC141Q6ZP82 1450 aa11.28□□□□□ -0.6
CDC42-205ENST00000498236 MFRPQ9BY79 579 aa11.28□□□□□ -0.6
CDC42-205ENST00000498236 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.28□□□□□ -0.6
CDC42-205ENST00000498236 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
CDC42-205ENST00000498236 MAST1Q9Y2H9 1570 aa11.27□□□□□ -0.61
CDC42-205ENST00000498236 ANKRD30AQ9BXX3 1397 aa11.27□□□□□ -0.61
CDC42-205ENST00000498236 C9orf84Q5VXU9 1444 aa11.26□□□□□ -0.61
CDC42-205ENST00000498236 ABCC1P33527 1531 aa11.26□□□□□ -0.61
CDC42-205ENST00000498236 CYB5RLQ6IPT4 315 aa11.26□□□□□ -0.61
CDC42-205ENST00000498236 CHIC2Q9UKJ5 165 aa11.26□□□□□ -0.61
CDC42-205ENST00000498236 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 NBR1Q14596 966 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
CDC42-205ENST00000498236 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
CDC42-205ENST00000498236 SOX12O15370 315 aa11.24□□□□□ -0.61
CDC42-205ENST00000498236 HNRNPMP52272 730 aaKnown RBP eCLIP11.24□□□□□ -0.614e-7■■□□□ 11.8
CDC42-205ENST00000498236 FANCAO15360 1455 aa11.24□□□□□ -0.61
CDC42-205ENST00000498236 NLRP6P59044 892 aa11.23□□□□□ -0.61
CDC42-205ENST00000498236 GOLGA2Q08379 1002 aa11.23□□□□□ -0.61
CDC42-205ENST00000498236 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
CDC42-205ENST00000498236 GLI2P10070 1586 aa11.23□□□□□ -0.61
CDC42-205ENST00000498236 KDM6BO15054 1643 aa11.22□□□□□ -0.61
CDC42-205ENST00000498236 PLXNC1O60486 1568 aa11.21□□□□□ -0.61
CDC42-205ENST00000498236 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
CDC42-205ENST00000498236 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.61
CDC42-205ENST00000498236 CD109Q6YHK3 1445 aa11.21□□□□□ -0.61
CDC42-205ENST00000498236 ANKRD50Q9ULJ7 1429 aa11.2□□□□□ -0.62
CDC42-205ENST00000498236 MKRN3Q13064 507 aaKnown RBP11.2□□□□□ -0.62
CDC42-205ENST00000498236 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
CDC42-205ENST00000498236 KIF15Q9NS87 1388 aa11.19□□□□□ -0.62
CDC42-205ENST00000498236 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
CDC42-205ENST00000498236 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
CDC42-205ENST00000498236 NEO1Q92859 1461 aa11.19□□□□□ -0.62
CDC42-205ENST00000498236 TRAPPC8Q9Y2L5 1435 aa11.18□□□□□ -0.62
CDC42-205ENST00000498236 MAP3K4Q9Y6R4 1608 aa11.18□□□□□ -0.62
CDC42-205ENST00000498236 ADGRL1O94910 1474 aa11.18□□□□□ -0.62
CDC42-205ENST00000498236 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
CDC42-205ENST00000498236 KDM5DQ9BY66 1539 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
CDC42-205ENST00000498236 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 DENND4BO75064 1496 aaPredicted RBP11.16□□□□□ -0.62
CDC42-205ENST00000498236 SCAPERQ9BY12 1400 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 DIP2BQ9P265 1576 aa11.16□□□□□ -0.62
CDC42-205ENST00000498236 ZFYVE16Q7Z3T8 1539 aa11.15□□□□□ -0.62
CDC42-205ENST00000498236 PPP1R37O75864 691 aa11.15□□□□□ -0.62
CDC42-205ENST00000498236 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
CDC42-205ENST00000498236 ERBINQ96RT1 1412 aa11.15□□□□□ -0.62
CDC42-205ENST00000498236 INO80Q9ULG1 1556 aaPredicted RBP11.15□□□□□ -0.62
CDC42-205ENST00000498236 SPAG9O60271 1321 aaKnown RBP11.14□□□□□ -0.63
CDC42-205ENST00000498236 ZNF518AQ6AHZ1 1483 aa11.14□□□□□ -0.63
CDC42-205ENST00000498236 PDCD7Q8N8D1 485 aaKnown RBP11.14□□□□□ -0.63
CDC42-205ENST00000498236 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
CDC42-205ENST00000498236 MPHOSPH9Q99550 1183 aa11.14□□□□□ -0.63
CDC42-205ENST00000498236 PZPP20742 1482 aa11.13□□□□□ -0.63
CDC42-205ENST00000498236 KDM5CP41229 1560 aa11.13□□□□□ -0.63
CDC42-205ENST00000498236 POGZQ7Z3K3 1410 aa11.13□□□□□ -0.63
CDC42-205ENST00000498236 TPRNQ4KMQ1 711 aa11.13□□□□□ -0.63
CDC42-205ENST00000498236 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
CDC42-205ENST00000498236 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDC42-205ENST00000498236 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
CDC42-205ENST00000498236 UNC13BO14795 1591 aa11.11□□□□□ -0.63
CDC42-205ENST00000498236 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
CDC42-205ENST00000498236 MLH3Q9UHC1 1453 aa11.11□□□□□ -0.63
CDC42-205ENST00000498236 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
CDC42-205ENST00000498236 TEX14Q8IWB6 1497 aa11.09□□□□□ -0.63
CDC42-205ENST00000498236 NUP155O75694 1391 aa11.09□□□□□ -0.63
CDC42-205ENST00000498236 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
CDC42-205ENST00000498236 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
CDC42-205ENST00000498236 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
CDC42-205ENST00000498236 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
CDC42-205ENST00000498236 KIDINS220Q9ULH0 1771 aa11.08□□□□□ -0.64
CDC42-205ENST00000498236 DHX29Q7Z478 1369 aaKnown RBP11.07□□□□□ -0.64
CDC42-205ENST00000498236 EIF2AK4Q9P2K8 1649 aaKnown RBP11.07□□□□□ -0.64
CDC42-205ENST00000498236 SIN3AQ96ST3 1273 aa11.07□□□□□ -0.64
CDC42-205ENST00000498236 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
CDC42-205ENST00000498236 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
CDC42-205ENST00000498236 HECW2Q9P2P5 1572 aa11.07□□□□□ -0.64
CDC42-205ENST00000498236 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
CDC42-205ENST00000498236 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
CDC42-205ENST00000498236 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
CDC42-205ENST00000498236 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
CDC42-205ENST00000498236 RPRD2Q5VT52 1461 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms