RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-209ENST00000497511 TOM1O60784 492 aa17.48■□□□□ 0.39
SKAP2-209ENST00000497511 PDAP1Q13442 181 aaKnown RBP17.48■□□□□ 0.39
SKAP2-209ENST00000497511 ZNF142P52746 1687 aaPredicted RBP17.48■□□□□ 0.39
SKAP2-209ENST00000497511 PLXNC1O60486 1568 aa17.47■□□□□ 0.39
SKAP2-209ENST00000497511 INO80Q9ULG1 1556 aaPredicted RBP17.47■□□□□ 0.39
SKAP2-209ENST00000497511 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
SKAP2-209ENST00000497511 A2ML1A8K2U0 1454 aa17.45■□□□□ 0.38
SKAP2-209ENST00000497511 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
SKAP2-209ENST00000497511 HSPA1LP34931 641 aa17.45■□□□□ 0.38
SKAP2-209ENST00000497511 AMER1Q5JTC6 1135 aaPredicted RBP17.44■□□□□ 0.38
SKAP2-209ENST00000497511 PSEN1P49768 467 aa17.43■□□□□ 0.38
SKAP2-209ENST00000497511 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
SKAP2-209ENST00000497511 TNRQ92752 1358 aa17.42■□□□□ 0.38
SKAP2-209ENST00000497511 KIF3BO15066 747 aa17.42■□□□□ 0.38
SKAP2-209ENST00000497511 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
SKAP2-209ENST00000497511 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
SKAP2-209ENST00000497511 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
SKAP2-209ENST00000497511 RNF25Q96BH1 459 aaPredicted RBP17.41■□□□□ 0.38
SKAP2-209ENST00000497511 ANKLE2Q86XL3 938 aa17.4■□□□□ 0.38
SKAP2-209ENST00000497511 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
SKAP2-209ENST00000497511 ADGBQ8N7X0 1667 aa17.39■□□□□ 0.37
SKAP2-209ENST00000497511 CPS1P31327 1500 aa17.39■□□□□ 0.37
SKAP2-209ENST00000497511 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
SKAP2-209ENST00000497511 DHX29Q7Z478 1369 aaKnown RBP17.39■□□□□ 0.37
SKAP2-209ENST00000497511 SHANK2Q9UPX8 1470 aa17.38■□□□□ 0.37
SKAP2-209ENST00000497511 THEMISQ8N1K5 641 aaPredicted RBP17.38■□□□□ 0.37
SKAP2-209ENST00000497511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
SKAP2-209ENST00000497511 RTEL1-TNFRSF6BF6WH68 1400 aa17.37■□□□□ 0.37
SKAP2-209ENST00000497511 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
SKAP2-209ENST00000497511 RGL2O15211 777 aa17.35■□□□□ 0.37
SKAP2-209ENST00000497511 SLC39A7Q92504 469 aa17.35■□□□□ 0.37
SKAP2-209ENST00000497511 TRIM35Q9UPQ4 493 aa17.35■□□□□ 0.37
SKAP2-209ENST00000497511 MBD5Q9P267 1494 aa17.34■□□□□ 0.37
SKAP2-209ENST00000497511 TIAM1Q13009 1591 aa17.33■□□□□ 0.37
SKAP2-209ENST00000497511 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.37
SKAP2-209ENST00000497511 PZPP20742 1482 aa17.33■□□□□ 0.37
SKAP2-209ENST00000497511 C7P10643 843 aa17.33■□□□□ 0.36
SKAP2-209ENST00000497511 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
SKAP2-209ENST00000497511 EHBP1L1Q8N3D4 1523 aa17.32■□□□□ 0.36
SKAP2-209ENST00000497511 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
SKAP2-209ENST00000497511 POLR1AO95602 1720 aaPredicted RBP17.32■□□□□ 0.36
SKAP2-209ENST00000497511 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
SKAP2-209ENST00000497511 NPHP4O75161 1426 aaPredicted RBP17.31■□□□□ 0.36
SKAP2-209ENST00000497511 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
SKAP2-209ENST00000497511 RSPH4AQ5TD94 716 aa17.31■□□□□ 0.36
SKAP2-209ENST00000497511 NEURL4Q96JN8 1562 aa17.31■□□□□ 0.36
SKAP2-209ENST00000497511 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
SKAP2-209ENST00000497511 IER5LQ5T953 404 aa17.3■□□□□ 0.36
SKAP2-209ENST00000497511 NLRP1Q9C000 1473 aa17.3■□□□□ 0.36
SKAP2-209ENST00000497511 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
SKAP2-209ENST00000497511 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
SKAP2-209ENST00000497511 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
SKAP2-209ENST00000497511 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
SKAP2-209ENST00000497511 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
SKAP2-209ENST00000497511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.26■□□□□ 0.35
SKAP2-209ENST00000497511 ZFP91Q96JP5 570 aaPredicted RBP17.26■□□□□ 0.35
SKAP2-209ENST00000497511 VWDEQ8N2E2 1590 aa17.26■□□□□ 0.35
SKAP2-209ENST00000497511 METRNQ9UJH8 293 aa17.25■□□□□ 0.35
SKAP2-209ENST00000497511 MED14O60244 1454 aa17.24■□□□□ 0.35
SKAP2-209ENST00000497511 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
SKAP2-209ENST00000497511 RTN4Q9NQC3 1192 aaKnown RBP17.23■□□□□ 0.35
SKAP2-209ENST00000497511 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
SKAP2-209ENST00000497511 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
SKAP2-209ENST00000497511 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
SKAP2-209ENST00000497511 IQGAP1P46940 1657 aa17.2■□□□□ 0.34
SKAP2-209ENST00000497511 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
SKAP2-209ENST00000497511 SEC24BO95487 1268 aa17.18■□□□□ 0.34
SKAP2-209ENST00000497511 STK25O00506 426 aa17.17■□□□□ 0.34
SKAP2-209ENST00000497511 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
SKAP2-209ENST00000497511 RNF17Q9BXT8 1623 aaKnown RBP17.16■□□□□ 0.34
SKAP2-209ENST00000497511 ALKQ9UM73 1620 aa17.16■□□□□ 0.34
SKAP2-209ENST00000497511 ABCC3O15438 1527 aa17.16■□□□□ 0.34
SKAP2-209ENST00000497511 TXNDC2Q86VQ3 553 aa17.15■□□□□ 0.34
SKAP2-209ENST00000497511 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
SKAP2-209ENST00000497511 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
SKAP2-209ENST00000497511 SYNMO15061 1565 aa17.15■□□□□ 0.34
SKAP2-209ENST00000497511 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
SKAP2-209ENST00000497511 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
SKAP2-209ENST00000497511 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
SKAP2-209ENST00000497511 ZC3H13Q5T200 1668 aaKnown RBP17.11■□□□□ 0.33
SKAP2-209ENST00000497511 PLCG2P16885 1265 aa17.11■□□□□ 0.33
SKAP2-209ENST00000497511 LTKP29376 864 aa17.1■□□□□ 0.33
SKAP2-209ENST00000497511 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
SKAP2-209ENST00000497511 OCEL1Q9H607 264 aa17.1■□□□□ 0.33
SKAP2-209ENST00000497511 STRCP1A6NGW2 1772 aa17.09■□□□□ 0.33
SKAP2-209ENST00000497511 SOX12O15370 315 aa17.07■□□□□ 0.32
SKAP2-209ENST00000497511 LHX8Q68G74 356 aa17.07■□□□□ 0.32
SKAP2-209ENST00000497511 HS6ST3Q8IZP7 471 aa17.07■□□□□ 0.32
SKAP2-209ENST00000497511 EFCAB3Q8N7B9 438 aa17.07■□□□□ 0.32
SKAP2-209ENST00000497511 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
SKAP2-209ENST00000497511 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
SKAP2-209ENST00000497511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
SKAP2-209ENST00000497511 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
SKAP2-209ENST00000497511 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
SKAP2-209ENST00000497511 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
SKAP2-209ENST00000497511 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
SKAP2-209ENST00000497511 CHGAP10645 457 aaKnown RBP17.04■□□□□ 0.32
SKAP2-209ENST00000497511 BCANQ96GW7 911 aa17.04■□□□□ 0.32
SKAP2-209ENST00000497511 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
SKAP2-209ENST00000497511 SLIT1O75093 1534 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms