RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 NBR1Q14596 966 aa9.24□□□□□ -0.93
CACNA1C-229ENST00000496818 LRRIQ1Q96JM4 1722 aa9.24□□□□□ -0.93
CACNA1C-229ENST00000496818 MTUS2Q5JR59 1369 aa9.24□□□□□ -0.93
CACNA1C-229ENST00000496818 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
CACNA1C-229ENST00000496818 KIAA1107Q9UPP5 1409 aa9.23□□□□□ -0.93
CACNA1C-229ENST00000496818 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
CACNA1C-229ENST00000496818 DISP3Q9P2K9 1392 aa9.23□□□□□ -0.93
CACNA1C-229ENST00000496818 A2MP01023 1474 aa9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 KIDINS220Q9ULH0 1771 aa9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 GPATCH8Q9UKJ3 1502 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 PLXNC1O60486 1568 aa9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 INO80Q9ULG1 1556 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 CFDP1Q9UEE9 299 aaPredicted RBP9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 MROH2AA6NES4 1674 aa9.22□□□□□ -0.93
CACNA1C-229ENST00000496818 EHBP1L1Q8N3D4 1523 aa9.21□□□□□ -0.93
CACNA1C-229ENST00000496818 SPATA31D1Q6ZQQ2 1576 aa9.21□□□□□ -0.93
CACNA1C-229ENST00000496818 MS4A4AQ96JQ5 239 aa9.21□□□□□ -0.94
CACNA1C-229ENST00000496818 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
CACNA1C-229ENST00000496818 CDC42BPAQ5VT25 1732 aa9.21□□□□□ -0.94
CACNA1C-229ENST00000496818 PLA2R1Q13018 1463 aa9.21□□□□□ -0.94
CACNA1C-229ENST00000496818 CAMSAP1Q5T5Y3 1602 aa9.2□□□□□ -0.94
CACNA1C-229ENST00000496818 MYO3AQ8NEV4 1616 aa9.2□□□□□ -0.94
CACNA1C-229ENST00000496818 STRCQ7RTU9 1775 aa9.2□□□□□ -0.94
CACNA1C-229ENST00000496818 TIE1P35590 1138 aa9.2□□□□□ -0.94
CACNA1C-229ENST00000496818 ZMYM3Q14202 1370 aa9.2□□□□□ -0.94
CACNA1C-229ENST00000496818 TPRNQ4KMQ1 711 aa9.19□□□□□ -0.94
CACNA1C-229ENST00000496818 CEP170BQ9Y4F5 1589 aaPredicted RBP9.19□□□□□ -0.94
CACNA1C-229ENST00000496818 LTBP4Q8N2S1 1624 aa9.19□□□□□ -0.94
CACNA1C-229ENST00000496818 HNRNPMP52272 730 aaKnown RBP eCLIP9.18□□□□□ -0.94
CACNA1C-229ENST00000496818 ZNF142P52746 1687 aaPredicted RBP9.18□□□□□ -0.94
CACNA1C-229ENST00000496818 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
CACNA1C-229ENST00000496818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
CACNA1C-229ENST00000496818 TIAM1Q13009 1591 aa9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 FAM135AQ9P2D6 1515 aa9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 PTPRKQ15262 1439 aa9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 CEP162Q5TB80 1403 aa9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 GGT6Q6P531 493 aa9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 SUPT6HQ7KZ85 1726 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 CLTCQ00610 1675 aaKnown RBP9.16□□□□□ -0.94
CACNA1C-229ENST00000496818 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
CACNA1C-229ENST00000496818 CCDC141Q6ZP82 1450 aa9.15□□□□□ -0.94
CACNA1C-229ENST00000496818 RTEL1-TNFRSF6BF6WH68 1400 aa9.15□□□□□ -0.94
CACNA1C-229ENST00000496818 ADGBQ8N7X0 1667 aa9.15□□□□□ -0.94
CACNA1C-229ENST00000496818 KDM5DQ9BY66 1539 aa9.15□□□□□ -0.95
CACNA1C-229ENST00000496818 A2ML1A8K2U0 1454 aa9.15□□□□□ -0.95
CACNA1C-229ENST00000496818 ZNF335Q9H4Z2 1342 aaPredicted RBP9.14□□□□□ -0.95
CACNA1C-229ENST00000496818 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
CACNA1C-229ENST00000496818 ATN1P54259 1190 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-229ENST00000496818 KCNV2Q8TDN2 545 aa9.13□□□□□ -0.95
CACNA1C-229ENST00000496818 CAMSAP2Q08AD1 1489 aa9.13□□□□□ -0.95
CACNA1C-229ENST00000496818 MBD5Q9P267 1494 aa9.13□□□□□ -0.95
CACNA1C-229ENST00000496818 TNRQ92752 1358 aa9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 UBAP1LF5GYI3 381 aa9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 SOCS7O14512 581 aa9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 DPY19L2Q6NUT2 758 aa9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 PZPP20742 1482 aa9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 SETD1BQ9UPS6 1966 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-229ENST00000496818 CPS1P31327 1500 aa9.11□□□□□ -0.95
CACNA1C-229ENST00000496818 NCOA2Q15596 1464 aa9.11□□□□□ -0.95
CACNA1C-229ENST00000496818 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
CACNA1C-229ENST00000496818 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
CACNA1C-229ENST00000496818 ILDR2Q71H61 639 aa9.1□□□□□ -0.95
CACNA1C-229ENST00000496818 NLRP1Q9C000 1473 aa9.09□□□□□ -0.95
CACNA1C-229ENST00000496818 ZNF644Q9H582 1327 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-229ENST00000496818 KIF3BO15066 747 aa9.09□□□□□ -0.95
CACNA1C-229ENST00000496818 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
CACNA1C-229ENST00000496818 DNMT1P26358 1616 aaKnown RBP9.09□□□□□ -0.95
CACNA1C-229ENST00000496818 WASHC2CQ9Y4E1 1318 aa9.08□□□□□ -0.96
CACNA1C-229ENST00000496818 GABBR2O75899 941 aa9.08□□□□□ -0.96
CACNA1C-229ENST00000496818 PDE4AP27815 886 aa9.08□□□□□ -0.96
CACNA1C-229ENST00000496818 ARHGEF5Q12774 1597 aa9.07□□□□□ -0.96
CACNA1C-229ENST00000496818 CLCN6P51797 869 aa9.07□□□□□ -0.96
CACNA1C-229ENST00000496818 NEURL4Q96JN8 1562 aa9.07□□□□□ -0.96
CACNA1C-229ENST00000496818 UGGT1Q9NYU2 1555 aa9.07□□□□□ -0.96
CACNA1C-229ENST00000496818 TOM1O60784 492 aa9.06□□□□□ -0.96
CACNA1C-229ENST00000496818 TSPY4P0CV99 314 aa9.06□□□□□ -0.96
CACNA1C-229ENST00000496818 TSPY10P0CW01 314 aa9.06□□□□□ -0.96
CACNA1C-229ENST00000496818 E2F4Q16254 413 aa9.06□□□□□ -0.96
CACNA1C-229ENST00000496818 POTEHQ6S545 545 aa9.06□□□□□ -0.96
CACNA1C-229ENST00000496818 NPHP4O75161 1426 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 ZC3H13Q5T200 1668 aaKnown RBP9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 SHANK2Q9UPX8 1470 aa9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 ANKLE2Q86XL3 938 aa9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 THEMISQ8N1K5 641 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 POLR1AO95602 1720 aaPredicted RBP9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 MIA2Q96PC5 1412 aa9.05□□□□□ -0.96
CACNA1C-229ENST00000496818 ASTLQ6HA08 431 aaPredicted RBP9.04□□□□□ -0.96
CACNA1C-229ENST00000496818 ABCC3O15438 1527 aa9.04□□□□□ -0.96
CACNA1C-229ENST00000496818 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 LRRC9Q6ZRR7 1453 aa9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 RNF17Q9BXT8 1623 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 EIF2AK4Q9P2K8 1649 aaKnown RBP9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 FBXO31Q5XUX0 539 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-229ENST00000496818 DDX27Q96GQ7 796 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms