RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 KIF13AQ9H1H9 1805 aa19.7■□□□□ 0.74
UBXN11-215ENST00000494942 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
UBXN11-215ENST00000494942 SYNMO15061 1565 aa19.69■□□□□ 0.74
UBXN11-215ENST00000494942 TET3O43151 1660 aa19.67■□□□□ 0.74
UBXN11-215ENST00000494942 MS4A1P11836 297 aa19.67■□□□□ 0.74
UBXN11-215ENST00000494942 NEURL4Q96JN8 1562 aa19.66■□□□□ 0.74
UBXN11-215ENST00000494942 CLTCL1P53675 1640 aa19.65■□□□□ 0.74
UBXN11-215ENST00000494942 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
UBXN11-215ENST00000494942 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
UBXN11-215ENST00000494942 EIF3AQ14152 1382 aaKnown RBP19.65■□□□□ 0.74
UBXN11-215ENST00000494942 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
UBXN11-215ENST00000494942 KANK1Q14678 1352 aa19.65■□□□□ 0.74
UBXN11-215ENST00000494942 KIAA1210Q9ULL0 1709 aa19.65■□□□□ 0.74
UBXN11-215ENST00000494942 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.74
UBXN11-215ENST00000494942 PPP2R1AP30153 589 aa19.64■□□□□ 0.74
UBXN11-215ENST00000494942 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.74
UBXN11-215ENST00000494942 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.74
UBXN11-215ENST00000494942 NPC1L1Q9UHC9 1359 aa19.64■□□□□ 0.73
UBXN11-215ENST00000494942 SLC24A1O60721 1099 aa19.64■□□□□ 0.73
UBXN11-215ENST00000494942 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
UBXN11-215ENST00000494942 AFAP1Q8N556 730 aa19.63■□□□□ 0.73
UBXN11-215ENST00000494942 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
UBXN11-215ENST00000494942 WDR43Q15061 677 aaKnown RBP eCLIP19.63■□□□□ 0.73
UBXN11-215ENST00000494942 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
UBXN11-215ENST00000494942 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
UBXN11-215ENST00000494942 GLI2P10070 1586 aa19.62■□□□□ 0.73
UBXN11-215ENST00000494942 PIK3C2GO75747 1445 aa19.61■□□□□ 0.73
UBXN11-215ENST00000494942 INO80Q9ULG1 1556 aaPredicted RBP19.61■□□□□ 0.73
UBXN11-215ENST00000494942 ATP7AQ04656 1500 aa19.6■□□□□ 0.73
UBXN11-215ENST00000494942 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
UBXN11-215ENST00000494942 MAP3K4Q9Y6R4 1608 aa19.59■□□□□ 0.73
UBXN11-215ENST00000494942 PDE4AP27815 886 aa19.59■□□□□ 0.73
UBXN11-215ENST00000494942 PLIN1O60240 522 aa19.58■□□□□ 0.73
UBXN11-215ENST00000494942 MYOM1P52179 1685 aa19.58■□□□□ 0.73
UBXN11-215ENST00000494942 KDM5AP29375 1690 aaKnown RBP19.58■□□□□ 0.72
UBXN11-215ENST00000494942 BACH2Q9BYV9 841 aa19.58■□□□□ 0.72
UBXN11-215ENST00000494942 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
UBXN11-215ENST00000494942 FANCAO15360 1455 aa19.57■□□□□ 0.72
UBXN11-215ENST00000494942 ZNF521Q96K83 1311 aa19.56■□□□□ 0.72
UBXN11-215ENST00000494942 MYOM2P54296 1465 aa19.56■□□□□ 0.72
UBXN11-215ENST00000494942 CD109Q6YHK3 1445 aa19.55■□□□□ 0.72
UBXN11-215ENST00000494942 PLEKHH1Q9ULM0 1364 aa19.55■□□□□ 0.72
UBXN11-215ENST00000494942 GOLGA2Q08379 1002 aa19.54■□□□□ 0.72
UBXN11-215ENST00000494942 DUSP27Q5VZP5 1158 aa19.54■□□□□ 0.72
UBXN11-215ENST00000494942 KIF3BO15066 747 aa19.53■□□□□ 0.72
UBXN11-215ENST00000494942 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
UBXN11-215ENST00000494942 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.72
UBXN11-215ENST00000494942 NBR1Q14596 966 aa19.52■□□□□ 0.72
UBXN11-215ENST00000494942 DEKP35659 375 aaKnown RBP19.52■□□□□ 0.71
UBXN11-215ENST00000494942 ADGRL1O94910 1474 aa19.51■□□□□ 0.71
UBXN11-215ENST00000494942 KIF1BO60333 1816 aa19.5■□□□□ 0.71
UBXN11-215ENST00000494942 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
UBXN11-215ENST00000494942 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
UBXN11-215ENST00000494942 SLFN5Q08AF3 891 aa19.48■□□□□ 0.71
UBXN11-215ENST00000494942 NGEFQ8N5V2 710 aa19.48■□□□□ 0.71
UBXN11-215ENST00000494942 ERVK-7P63135 1459 aa19.48■□□□□ 0.71
UBXN11-215ENST00000494942 EFCAB6Q5THR3 1501 aa19.48■□□□□ 0.71
UBXN11-215ENST00000494942 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
UBXN11-215ENST00000494942 IFT172Q9UG01 1749 aa19.48■□□□□ 0.71
UBXN11-215ENST00000494942 RTL5Q5HYW3 569 aaPredicted RBP19.47■□□□□ 0.71
UBXN11-215ENST00000494942 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
UBXN11-215ENST00000494942 KDM2BQ8NHM5 1336 aa19.47■□□□□ 0.71
UBXN11-215ENST00000494942 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
UBXN11-215ENST00000494942 TRMT2AQ8IZ69 625 aaKnown RBP19.47■□□□□ 0.71
UBXN11-215ENST00000494942 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
UBXN11-215ENST00000494942 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
UBXN11-215ENST00000494942 MYO3AQ8NEV4 1616 aa19.46■□□□□ 0.71
UBXN11-215ENST00000494942 NRXN1Q9ULB1 1477 aa19.45■□□□□ 0.7
UBXN11-215ENST00000494942 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
UBXN11-215ENST00000494942 ADGRF5Q8IZF2 1346 aa19.44■□□□□ 0.7
UBXN11-215ENST00000494942 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
UBXN11-215ENST00000494942 NKTRP30414 1462 aaKnown RBP19.43■□□□□ 0.7
UBXN11-215ENST00000494942 DDRGK1Q96HY6 314 aa19.42■□□□□ 0.7
UBXN11-215ENST00000494942 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
UBXN11-215ENST00000494942 KIDINS220Q9ULH0 1771 aa19.41■□□□□ 0.7
UBXN11-215ENST00000494942 E9PSI1 815 aa19.41■□□□□ 0.7
UBXN11-215ENST00000494942 APAF1O14727 1248 aa19.4■□□□□ 0.7
UBXN11-215ENST00000494942 CCDC146Q8IYE0 955 aa19.4■□□□□ 0.7
UBXN11-215ENST00000494942 CFAP74Q9C0B2 1584 aa19.4■□□□□ 0.7
UBXN11-215ENST00000494942 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
UBXN11-215ENST00000494942 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
UBXN11-215ENST00000494942 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
UBXN11-215ENST00000494942 ADGRB3O60242 1522 aa19.38■□□□□ 0.69
UBXN11-215ENST00000494942 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
UBXN11-215ENST00000494942 USP35Q9P2H5 1018 aa19.38■□□□□ 0.69
UBXN11-215ENST00000494942 NEO1Q92859 1461 aa19.38■□□□□ 0.69
UBXN11-215ENST00000494942 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
UBXN11-215ENST00000494942 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
UBXN11-215ENST00000494942 NOS1P29475 1434 aa19.35■□□□□ 0.69
UBXN11-215ENST00000494942 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
UBXN11-215ENST00000494942 SPINK5Q9NQ38 1064 aaPredicted RBP19.34■□□□□ 0.69
UBXN11-215ENST00000494942 FAM161AQ3B820 660 aa19.33■□□□□ 0.69
UBXN11-215ENST00000494942 NINLQ9Y2I6 1382 aa19.33■□□□□ 0.68
UBXN11-215ENST00000494942 PPLO60437 1756 aa19.32■□□□□ 0.68
UBXN11-215ENST00000494942 ZC3H13Q5T200 1668 aaKnown RBP19.31■□□□□ 0.68
UBXN11-215ENST00000494942 C14orf93Q9H972 538 aaKnown RBP19.31■□□□□ 0.68
UBXN11-215ENST00000494942 RPGRIP1LQ68CZ1 1315 aa19.31■□□□□ 0.68
UBXN11-215ENST00000494942 PDE3AQ14432 1141 aa19.3■□□□□ 0.68
UBXN11-215ENST00000494942 QRICH2Q9H0J4 1663 aa19.29■□□□□ 0.68
UBXN11-215ENST00000494942 NSD3Q9BZ95 1437 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms