RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
PRPF3-206ENST00000493553 MIA2Q96PC5 1412 aa14.7□□□□□ -0.06
PRPF3-206ENST00000493553 SETD5Q9C0A6 1442 aa14.7□□□□□ -0.06
PRPF3-206ENST00000493553 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
PRPF3-206ENST00000493553 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
PRPF3-206ENST00000493553 EVI5O60447 810 aa14.69□□□□□ -0.06
PRPF3-206ENST00000493553 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
PRPF3-206ENST00000493553 ARHGEF11O15085 1522 aa14.67□□□□□ -0.06
PRPF3-206ENST00000493553 PBX2P40425 430 aa14.67□□□□□ -0.06
PRPF3-206ENST00000493553 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
PRPF3-206ENST00000493553 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
PRPF3-206ENST00000493553 PPP4R3BQ5MIZ7 849 aa14.66□□□□□ -0.06
PRPF3-206ENST00000493553 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
PRPF3-206ENST00000493553 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
PRPF3-206ENST00000493553 E2F4Q16254 413 aa14.63□□□□□ -0.07
PRPF3-206ENST00000493553 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
PRPF3-206ENST00000493553 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
PRPF3-206ENST00000493553 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
PRPF3-206ENST00000493553 ITGAEP38570 1179 aa14.62□□□□□ -0.07
PRPF3-206ENST00000493553 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
PRPF3-206ENST00000493553 DPYSL4O14531 572 aa14.61□□□□□ -0.07
PRPF3-206ENST00000493553 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
PRPF3-206ENST00000493553 AKNAQ7Z591 1439 aa14.6□□□□□ -0.07
PRPF3-206ENST00000493553 FOSBP53539 338 aa14.6□□□□□ -0.07
PRPF3-206ENST00000493553 POTEEQ6S8J3 1075 aa14.6□□□□□ -0.07
PRPF3-206ENST00000493553 HFM1A2PYH4 1435 aa14.59□□□□□ -0.07
PRPF3-206ENST00000493553 PTPRGP23470 1445 aa14.59□□□□□ -0.07
PRPF3-206ENST00000493553 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
PRPF3-206ENST00000493553 ZNF454Q8N9F8 522 aa14.59□□□□□ -0.07
PRPF3-206ENST00000493553 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
PRPF3-206ENST00000493553 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.08
PRPF3-206ENST00000493553 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
PRPF3-206ENST00000493553 ARHGAP33O14559 1287 aa14.57□□□□□ -0.08
PRPF3-206ENST00000493553 LSM11P83369 360 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRPF3-206ENST00000493553 LRRIQ1Q96JM4 1722 aa14.57□□□□□ -0.08
PRPF3-206ENST00000493553 PTPN23Q9H3S7 1636 aa14.56□□□□□ -0.08
PRPF3-206ENST00000493553 ABCA8O94911 1581 aa14.56□□□□□ -0.08
PRPF3-206ENST00000493553 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
PRPF3-206ENST00000493553 MAGI3Q5TCQ9 1506 aa14.55□□□□□ -0.08
PRPF3-206ENST00000493553 PLB1Q6P1J6 1458 aa14.53□□□□□ -0.08
PRPF3-206ENST00000493553 PDIA6Q15084 440 aa14.53□□□□□ -0.08
PRPF3-206ENST00000493553 SHROOM2Q13796 1616 aa14.52□□□□□ -0.08
PRPF3-206ENST00000493553 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
PRPF3-206ENST00000493553 MMRN1Q13201 1228 aa14.52□□□□□ -0.09
PRPF3-206ENST00000493553 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.09
PRPF3-206ENST00000493553 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
PRPF3-206ENST00000493553 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
PRPF3-206ENST00000493553 PTGER2P43116 358 aa14.5□□□□□ -0.09
PRPF3-206ENST00000493553 ZDHHC16Q969W1 377 aa14.5□□□□□ -0.09
PRPF3-206ENST00000493553 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 CHD1O14646 1710 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 ADCY10Q96PN6 1610 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 PHF14O94880 888 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 KCNH8Q96L42 1107 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
PRPF3-206ENST00000493553 PCDHGA10Q9Y5H3 936 aa14.49□□□□□ -0.09
PRPF3-206ENST00000493553 PSEN2P49810 448 aa14.48□□□□□ -0.09
PRPF3-206ENST00000493553 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
PRPF3-206ENST00000493553 NAIPQ13075 1403 aa14.48□□□□□ -0.09
PRPF3-206ENST00000493553 ATP10BO94823 1461 aa14.47□□□□□ -0.09
PRPF3-206ENST00000493553 KCNK17Q96T54 332 aa14.47□□□□□ -0.09
PRPF3-206ENST00000493553 RSPH4AQ5TD94 716 aa14.46□□□□□ -0.09
PRPF3-206ENST00000493553 FBXW7Q969H0 707 aa14.46□□□□□ -0.09
PRPF3-206ENST00000493553 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
PRPF3-206ENST00000493553 ADAM33Q9BZ11 813 aa14.45□□□□□ -0.1
PRPF3-206ENST00000493553 KIF14Q15058 1648 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 ARID3CA6NKF2 412 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 TK2O00142 265 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 PTPREP23469 700 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 DMRTA1Q5VZB9 504 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 EPAS1Q99814 870 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 CLASP1Q7Z460 1538 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
PRPF3-206ENST00000493553 DAPK1P53355 1430 aa14.43□□□□□ -0.1
PRPF3-206ENST00000493553 PTPRKQ15262 1439 aa14.43□□□□□ -0.1
PRPF3-206ENST00000493553 GPATCH8Q9UKJ3 1502 aaKnown RBP14.43□□□□□ -0.1
PRPF3-206ENST00000493553 ADGRD1Q6QNK2 874 aa14.42□□□□□ -0.1
PRPF3-206ENST00000493553 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
PRPF3-206ENST00000493553 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
PRPF3-206ENST00000493553 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
PRPF3-206ENST00000493553 ARHGEF1Q92888 912 aaKnown RBP14.41□□□□□ -0.1
PRPF3-206ENST00000493553 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
PRPF3-206ENST00000493553 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
PRPF3-206ENST00000493553 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
PRPF3-206ENST00000493553 DDX12PQ92771 950 aa14.4□□□□□ -0.1
PRPF3-206ENST00000493553 ABCC5O15440 1437 aa14.4□□□□□ -0.1
PRPF3-206ENST00000493553 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
PRPF3-206ENST00000493553 ABCC10Q5T3U5 1492 aa14.39□□□□□ -0.11
PRPF3-206ENST00000493553 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
PRPF3-206ENST00000493553 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
PRPF3-206ENST00000493553 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
PRPF3-206ENST00000493553 MYT1LQ9UL68 1186 aa14.38□□□□□ -0.11
PRPF3-206ENST00000493553 SHANK2Q9UPX8 1470 aa14.38□□□□□ -0.11
PRPF3-206ENST00000493553 ADGRL2O95490 1459 aa14.37□□□□□ -0.11
PRPF3-206ENST00000493553 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
PRPF3-206ENST00000493553 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
PRPF3-206ENST00000493553 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
PRPF3-206ENST00000493553 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
PRPF3-206ENST00000493553 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
PRPF3-206ENST00000493553 HRO43593 1189 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms