RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
PHC3-213ENST00000491258 FCHSD2O94868 740 aa11.85□□□□□ -0.51
PHC3-213ENST00000491258 GGCXP38435 758 aa11.85□□□□□ -0.51
PHC3-213ENST00000491258 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
PHC3-213ENST00000491258 ZPR1O75312 459 aa11.84□□□□□ -0.51
PHC3-213ENST00000491258 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
PHC3-213ENST00000491258 V9GY48 417 aaPredicted RBP11.83□□□□□ -0.52
PHC3-213ENST00000491258 BLOC1S3Q6QNY0 202 aa11.82□□□□□ -0.52
PHC3-213ENST00000491258 NRG2O14511 850 aaPredicted RBP11.81□□□□□ -0.52
PHC3-213ENST00000491258 KMT5BQ4FZB7 885 aa11.8□□□□□ -0.52
PHC3-213ENST00000491258 CFHP08603 1231 aa11.78□□□□□ -0.52
PHC3-213ENST00000491258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
PHC3-213ENST00000491258 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
PHC3-213ENST00000491258 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
PHC3-213ENST00000491258 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
PHC3-213ENST00000491258 TLL1O43897 1013 aa11.76□□□□□ -0.53
PHC3-213ENST00000491258 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
PHC3-213ENST00000491258 OATP04181 439 aa11.74□□□□□ -0.53
PHC3-213ENST00000491258 SLC10A3P09131 477 aa11.74□□□□□ -0.53
PHC3-213ENST00000491258 HIC1Q14526 733 aa11.74□□□□□ -0.53
PHC3-213ENST00000491258 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
PHC3-213ENST00000491258 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
PHC3-213ENST00000491258 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
PHC3-213ENST00000491258 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
PHC3-213ENST00000491258 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
PHC3-213ENST00000491258 S1PR4O95977 384 aa11.69□□□□□ -0.54
PHC3-213ENST00000491258 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
PHC3-213ENST00000491258 NR1I2O75469 434 aa11.68□□□□□ -0.54
PHC3-213ENST00000491258 SLC19A1P41440 591 aa11.68□□□□□ -0.54
PHC3-213ENST00000491258 PPEF1O14829 653 aaPredicted RBP11.67□□□□□ -0.54
PHC3-213ENST00000491258 GNPATO15228 680 aa11.67□□□□□ -0.54
PHC3-213ENST00000491258 FECHP22830 423 aa11.67□□□□□ -0.54
PHC3-213ENST00000491258 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
PHC3-213ENST00000491258 ADH1BP00325 375 aa11.66□□□□□ -0.54
PHC3-213ENST00000491258 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
PHC3-213ENST00000491258 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.54
PHC3-213ENST00000491258 PUS10Q3MIT2 529 aaKnown RBP11.64□□□□□ -0.55
PHC3-213ENST00000491258 ZNF787Q6DD87 383 aa11.63□□□□□ -0.55
PHC3-213ENST00000491258 RDH13Q8NBN7 331 aa11.63□□□□□ -0.55
PHC3-213ENST00000491258 EMID1Q96A84 441 aaPredicted RBP11.63□□□□□ -0.55
PHC3-213ENST00000491258 GPR37O15354 613 aa11.62□□□□□ -0.55
PHC3-213ENST00000491258 SLC6A16Q9GZN6 736 aa11.62□□□□□ -0.55
PHC3-213ENST00000491258 SCUBE3Q8IX30 993 aa11.61□□□□□ -0.55
PHC3-213ENST00000491258 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
PHC3-213ENST00000491258 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
PHC3-213ENST00000491258 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
PHC3-213ENST00000491258 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
PHC3-213ENST00000491258 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
PHC3-213ENST00000491258 TRIM67Q6ZTA4 783 aa11.58□□□□□ -0.56
PHC3-213ENST00000491258 ZNF598Q86UK7 904 aaKnown RBP11.58□□□□□ -0.56
PHC3-213ENST00000491258 GPIHBP1Q8IV16 184 aa11.58□□□□□ -0.56
PHC3-213ENST00000491258 ZNF775Q96BV0 537 aaPredicted RBP11.58□□□□□ -0.56
PHC3-213ENST00000491258 ZNF697Q5TEC3 545 aa11.57□□□□□ -0.56
PHC3-213ENST00000491258 SPSB2Q99619 263 aa11.57□□□□□ -0.56
PHC3-213ENST00000491258 PLA2G2CQ5R387 149 aa11.54□□□□□ -0.56
PHC3-213ENST00000491258 FUT2Q10981 343 aa11.53□□□□□ -0.56
PHC3-213ENST00000491258 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
PHC3-213ENST00000491258 PHOX2BQ99453 314 aa11.53□□□□□ -0.56
PHC3-213ENST00000491258 KDM2AQ9Y2K7 1162 aa11.53□□□□□ -0.56
PHC3-213ENST00000491258 TNFRSF10AO00220 468 aa11.52□□□□□ -0.57
PHC3-213ENST00000491258 MORN1Q5T089 497 aa11.52□□□□□ -0.57
PHC3-213ENST00000491258 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
PHC3-213ENST00000491258 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 PRR20EP86478 221 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 PRR20CP86479 221 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 PRR20DP86480 221 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 PRR20BP86481 221 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 PRR20AP86496 221 aa11.51□□□□□ -0.57
PHC3-213ENST00000491258 GCGRP47871 477 aa11.5□□□□□ -0.57
PHC3-213ENST00000491258 FAM187AA6NFU0 413 aa11.48□□□□□ -0.57
PHC3-213ENST00000491258 DGAT1O75907 488 aa11.48□□□□□ -0.57
PHC3-213ENST00000491258 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
PHC3-213ENST00000491258 SLC27A5Q9Y2P5 690 aa11.48□□□□□ -0.57
PHC3-213ENST00000491258 GDF9O60383 454 aa11.47□□□□□ -0.57
PHC3-213ENST00000491258 THAP11Q96EK4 314 aa11.47□□□□□ -0.57
PHC3-213ENST00000491258 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.57
PHC3-213ENST00000491258 MYT1Q01538 1121 aa11.45□□□□□ -0.58
PHC3-213ENST00000491258 FOXC1Q12948 553 aa11.45□□□□□ -0.58
PHC3-213ENST00000491258 FAM160A2Q8N612 972 aaPredicted RBP11.44□□□□□ -0.58
PHC3-213ENST00000491258 TULP1O00294 542 aaPredicted RBP11.43□□□□□ -0.58
PHC3-213ENST00000491258 PRDM9Q9NQV7 894 aa11.43□□□□□ -0.58
PHC3-213ENST00000491258 RPIAP49247 311 aa11.42□□□□□ -0.58
PHC3-213ENST00000491258 GRIPAP1Q4V328 841 aa11.42□□□□□ -0.58
PHC3-213ENST00000491258 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
PHC3-213ENST00000491258 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
PHC3-213ENST00000491258 RNF19BQ6ZMZ0 732 aa11.41□□□□□ -0.58
PHC3-213ENST00000491258 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
PHC3-213ENST00000491258 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
PHC3-213ENST00000491258 POTECB2RU33 542 aa11.38□□□□□ -0.59
PHC3-213ENST00000491258 CD2BP2O95400 341 aaKnown RBP11.38□□□□□ -0.59
PHC3-213ENST00000491258 CD46P15529 392 aa11.37□□□□□ -0.59
PHC3-213ENST00000491258 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
PHC3-213ENST00000491258 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
PHC3-213ENST00000491258 IRF6O14896 467 aa11.36□□□□□ -0.59
PHC3-213ENST00000491258 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
PHC3-213ENST00000491258 Q3C1V9 767 aa11.36□□□□□ -0.59
PHC3-213ENST00000491258 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
PHC3-213ENST00000491258 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
PHC3-213ENST00000491258 ZBTB24O43167 697 aaPredicted RBP11.35□□□□□ -0.59
PHC3-213ENST00000491258 KDM4AO75164 1064 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms