RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PDE3BQ13370 1112 aa13.18□□□□□ -0.3
BRD9-209ENST00000490814 TMF1P82094 1093 aa13.18□□□□□ -0.3
BRD9-209ENST00000490814 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
BRD9-209ENST00000490814 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
BRD9-209ENST00000490814 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
BRD9-209ENST00000490814 RALGAPBQ86X10 1494 aa13.17□□□□□ -0.3
BRD9-209ENST00000490814 CEBPAP49715 358 aaPredicted RBP13.17□□□□□ -0.3
BRD9-209ENST00000490814 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
BRD9-209ENST00000490814 LRPPRCP42704 1394 aaKnown RBP13.17□□□□□ -0.3
BRD9-209ENST00000490814 ADAMTS8Q9UP79 889 aa13.16□□□□□ -0.3
BRD9-209ENST00000490814 KDM5CP41229 1560 aa13.16□□□□□ -0.3
BRD9-209ENST00000490814 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
BRD9-209ENST00000490814 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
BRD9-209ENST00000490814 TTC37Q6PGP7 1564 aa13.15□□□□□ -0.3
BRD9-209ENST00000490814 ARXQ96QS3 562 aa13.14□□□□□ -0.31
BRD9-209ENST00000490814 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
BRD9-209ENST00000490814 FRAT2O75474 233 aaPredicted RBP13.12□□□□□ -0.31
BRD9-209ENST00000490814 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
BRD9-209ENST00000490814 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
BRD9-209ENST00000490814 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
BRD9-209ENST00000490814 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
BRD9-209ENST00000490814 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
BRD9-209ENST00000490814 CANXP27824 592 aaKnown RBP13.11□□□□□ -0.31
BRD9-209ENST00000490814 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
BRD9-209ENST00000490814 ADGRL2O95490 1459 aa13.1□□□□□ -0.31
BRD9-209ENST00000490814 SYCP2Q9BX26 1530 aa13.1□□□□□ -0.31
BRD9-209ENST00000490814 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
BRD9-209ENST00000490814 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
BRD9-209ENST00000490814 YEATS2Q9ULM3 1422 aa13.09□□□□□ -0.31
BRD9-209ENST00000490814 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
BRD9-209ENST00000490814 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.09□□□□□ -0.31
BRD9-209ENST00000490814 ITSN2Q9NZM3 1697 aa13.09□□□□□ -0.31
BRD9-209ENST00000490814 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
BRD9-209ENST00000490814 TESK2Q96S53 571 aa13.08□□□□□ -0.32
BRD9-209ENST00000490814 RRAGDQ9NQL2 400 aaPredicted RBP13.08□□□□□ -0.32
BRD9-209ENST00000490814 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
BRD9-209ENST00000490814 TNNT2P45379 298 aaPredicted RBP13.07□□□□□ -0.32
BRD9-209ENST00000490814 PRAG1Q86YV5 1406 aa13.07□□□□□ -0.32
BRD9-209ENST00000490814 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
BRD9-209ENST00000490814 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
BRD9-209ENST00000490814 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
BRD9-209ENST00000490814 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
BRD9-209ENST00000490814 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
BRD9-209ENST00000490814 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
BRD9-209ENST00000490814 APAF1O14727 1248 aa13.05□□□□□ -0.32
BRD9-209ENST00000490814 CALD1Q05682 793 aaKnown RBP13.05□□□□□ -0.32
BRD9-209ENST00000490814 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
BRD9-209ENST00000490814 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
BRD9-209ENST00000490814 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
BRD9-209ENST00000490814 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
BRD9-209ENST00000490814 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
BRD9-209ENST00000490814 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
BRD9-209ENST00000490814 NAP1L2Q9ULW6 460 aaPredicted RBP13.03□□□□□ -0.32
BRD9-209ENST00000490814 BCAR3O75815 825 aa13.02□□□□□ -0.32
BRD9-209ENST00000490814 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
BRD9-209ENST00000490814 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
BRD9-209ENST00000490814 DUSP27Q5VZP5 1158 aa13.01□□□□□ -0.33
BRD9-209ENST00000490814 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
BRD9-209ENST00000490814 PLEKHH2Q8IVE3 1493 aa13.01□□□□□ -0.33
BRD9-209ENST00000490814 CDCA8Q53HL2 280 aa13□□□□□ -0.33
BRD9-209ENST00000490814 A2MP01023 1474 aa13□□□□□ -0.33
BRD9-209ENST00000490814 PAXIP1Q6ZW49 1069 aaPredicted RBP13□□□□□ -0.33
BRD9-209ENST00000490814 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
BRD9-209ENST00000490814 POGKQ9P215 609 aa12.99□□□□□ -0.33
BRD9-209ENST00000490814 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
BRD9-209ENST00000490814 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
BRD9-209ENST00000490814 SPINK5Q9NQ38 1064 aaPredicted RBP12.98□□□□□ -0.33
BRD9-209ENST00000490814 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
BRD9-209ENST00000490814 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
BRD9-209ENST00000490814 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
BRD9-209ENST00000490814 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
BRD9-209ENST00000490814 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
BRD9-209ENST00000490814 MYO5CQ9NQX4 1742 aa12.97□□□□□ -0.33
BRD9-209ENST00000490814 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
BRD9-209ENST00000490814 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 HSPA2P54652 639 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 PANK1Q8TE04 598 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 NEO1Q92859 1461 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 KANK1Q14678 1352 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 PLA2R1Q13018 1463 aa12.96□□□□□ -0.33
BRD9-209ENST00000490814 ABCA9Q8IUA7 1624 aa12.96□□□□□ -0.34
BRD9-209ENST00000490814 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.34
BRD9-209ENST00000490814 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.34
BRD9-209ENST00000490814 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
BRD9-209ENST00000490814 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
BRD9-209ENST00000490814 BLMP54132 1417 aaPredicted RBP12.95□□□□□ -0.34
BRD9-209ENST00000490814 CDC42BPBQ9Y5S2 1711 aa12.95□□□□□ -0.34
BRD9-209ENST00000490814 SPRYD3Q8NCJ5 442 aa12.94□□□□□ -0.34
BRD9-209ENST00000490814 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
BRD9-209ENST00000490814 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
BRD9-209ENST00000490814 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
BRD9-209ENST00000490814 BECN1Q14457 450 aa12.93□□□□□ -0.34
BRD9-209ENST00000490814 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
BRD9-209ENST00000490814 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
BRD9-209ENST00000490814 CLCN1P35523 988 aa12.92□□□□□ -0.34
BRD9-209ENST00000490814 KIF13AQ9H1H9 1805 aa12.92□□□□□ -0.34
BRD9-209ENST00000490814 IGHDP01880 384 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms