RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
VTI1A-207ENST00000489357 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
VTI1A-207ENST00000489357 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
VTI1A-207ENST00000489357 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
VTI1A-207ENST00000489357 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
VTI1A-207ENST00000489357 CNTLNQ9NXG0 1405 aa12.04□□□□□ -0.48
VTI1A-207ENST00000489357 KIF3BO15066 747 aa12.04□□□□□ -0.48
VTI1A-207ENST00000489357 ECM2O94769 699 aaPredicted RBP12.04□□□□□ -0.48
VTI1A-207ENST00000489357 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
VTI1A-207ENST00000489357 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
VTI1A-207ENST00000489357 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-207ENST00000489357 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
VTI1A-207ENST00000489357 C3P01024 1663 aa12.03□□□□□ -0.48
VTI1A-207ENST00000489357 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
VTI1A-207ENST00000489357 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 CLTCQ00610 1675 aaKnown RBP12.01□□□□□ -0.49
VTI1A-207ENST00000489357 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 GGT6Q6P531 493 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
VTI1A-207ENST00000489357 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
VTI1A-207ENST00000489357 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
VTI1A-207ENST00000489357 PRDM15P57071 1507 aaPredicted RBP12□□□□□ -0.49
VTI1A-207ENST00000489357 CEBPAP49715 358 aaPredicted RBP11.99□□□□□ -0.49
VTI1A-207ENST00000489357 ANKRD30BQ9BXX2 1392 aa11.99□□□□□ -0.49
VTI1A-207ENST00000489357 ZC3H13Q5T200 1668 aaKnown RBP11.98□□□□□ -0.49
VTI1A-207ENST00000489357 ABCC3O15438 1527 aa11.98□□□□□ -0.49
VTI1A-207ENST00000489357 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
VTI1A-207ENST00000489357 LMTK2Q8IWU2 1503 aa11.97□□□□□ -0.49
VTI1A-207ENST00000489357 PZPP20742 1482 aa11.97□□□□□ -0.49
VTI1A-207ENST00000489357 NPATQ14207 1427 aa11.97□□□□□ -0.49
VTI1A-207ENST00000489357 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
VTI1A-207ENST00000489357 POTEHQ6S545 545 aa11.97□□□□□ -0.49
VTI1A-207ENST00000489357 ARHGAP31Q2M1Z3 1444 aa11.96□□□□□ -0.49
VTI1A-207ENST00000489357 CEP152O94986 1710 aa11.96□□□□□ -0.49
VTI1A-207ENST00000489357 UNC13BO14795 1591 aa11.96□□□□□ -0.5
VTI1A-207ENST00000489357 CFAP65Q6ZU64 1925 aaKnown RBP11.96□□□□□ -0.5
VTI1A-207ENST00000489357 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
VTI1A-207ENST00000489357 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
VTI1A-207ENST00000489357 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
VTI1A-207ENST00000489357 PYGBP11216 843 aa11.94□□□□□ -0.5
VTI1A-207ENST00000489357 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-207ENST00000489357 ESF1Q9H501 851 aaKnown RBP11.94□□□□□ -0.5
VTI1A-207ENST00000489357 HAX1O00165 279 aa11.93□□□□□ -0.5
VTI1A-207ENST00000489357 HSPA2P54652 639 aa11.93□□□□□ -0.5
VTI1A-207ENST00000489357 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
VTI1A-207ENST00000489357 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
VTI1A-207ENST00000489357 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
VTI1A-207ENST00000489357 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-207ENST00000489357 SPATA31D1Q6ZQQ2 1576 aa11.91□□□□□ -0.5
VTI1A-207ENST00000489357 RGL2O15211 777 aa11.9□□□□□ -0.5
VTI1A-207ENST00000489357 TET3O43151 1660 aa11.9□□□□□ -0.5
VTI1A-207ENST00000489357 KANK1Q14678 1352 aa11.9□□□□□ -0.5
VTI1A-207ENST00000489357 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
VTI1A-207ENST00000489357 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
VTI1A-207ENST00000489357 ZNF142P52746 1687 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-207ENST00000489357 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-207ENST00000489357 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
VTI1A-207ENST00000489357 NOS1P29475 1434 aa11.87□□□□□ -0.51
VTI1A-207ENST00000489357 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
VTI1A-207ENST00000489357 E9PCH4 1651 aa11.87□□□□□ -0.51
VTI1A-207ENST00000489357 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
VTI1A-207ENST00000489357 NUP155O75694 1391 aa11.86□□□□□ -0.51
VTI1A-207ENST00000489357 TNRQ92752 1358 aa11.86□□□□□ -0.51
VTI1A-207ENST00000489357 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
VTI1A-207ENST00000489357 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
VTI1A-207ENST00000489357 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
VTI1A-207ENST00000489357 L3MBTL2Q969R5 705 aa11.85□□□□□ -0.51
VTI1A-207ENST00000489357 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
VTI1A-207ENST00000489357 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
VTI1A-207ENST00000489357 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-207ENST00000489357 SYNMO15061 1565 aa11.84□□□□□ -0.51
VTI1A-207ENST00000489357 CEP170BQ9Y4F5 1589 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-207ENST00000489357 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
VTI1A-207ENST00000489357 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
VTI1A-207ENST00000489357 KDM5AP29375 1690 aaKnown RBP11.83□□□□□ -0.52
VTI1A-207ENST00000489357 PTPRTO14522 1441 aa11.83□□□□□ -0.52
VTI1A-207ENST00000489357 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
VTI1A-207ENST00000489357 EVX2Q03828 476 aa11.82□□□□□ -0.52
VTI1A-207ENST00000489357 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
VTI1A-207ENST00000489357 SPATA31E1Q6ZUB1 1445 aa11.81□□□□□ -0.52
VTI1A-207ENST00000489357 ANP32CO43423 234 aa11.81□□□□□ -0.52
VTI1A-207ENST00000489357 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 MAP3K13O43283 966 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
VTI1A-207ENST00000489357 IDI1Q13907 227 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-207ENST00000489357 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 PLA2R1Q13018 1463 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
VTI1A-207ENST00000489357 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
VTI1A-207ENST00000489357 PCDHB13Q9Y5F0 798 aa11.79□□□□□ -0.52
VTI1A-207ENST00000489357 SPHKAPQ2M3C7 1700 aa11.78□□□□□ -0.52
VTI1A-207ENST00000489357 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
VTI1A-207ENST00000489357 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
VTI1A-207ENST00000489357 HSPA5P11021 654 aaKnown RBP11.77□□□□□ -0.53
VTI1A-207ENST00000489357 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.53
VTI1A-207ENST00000489357 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms