RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ADAMTS8Q9UP79 889 aa25.55■■□□□ 1.68
HMG20B-213ENST00000488973 IQGAP1P46940 1657 aa25.54■■□□□ 1.68
HMG20B-213ENST00000488973 EFCAB2Q5VUJ9 269 aa25.54■■□□□ 1.68
HMG20B-213ENST00000488973 CENPQQ7L2Z9 268 aaPredicted RBP25.54■■□□□ 1.68
HMG20B-213ENST00000488973 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
HMG20B-213ENST00000488973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.687e-7■■□□□ 13.2
HMG20B-213ENST00000488973 C20orf194Q5TEA3 1177 aa25.52■■□□□ 1.68
HMG20B-213ENST00000488973 DUSP27Q5VZP5 1158 aa25.5■■□□□ 1.67
HMG20B-213ENST00000488973 ZNF521Q96K83 1311 aa25.49■■□□□ 1.67
HMG20B-213ENST00000488973 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
HMG20B-213ENST00000488973 SYNMO15061 1565 aa25.49■■□□□ 1.67
HMG20B-213ENST00000488973 SKAP1Q86WV1 359 aa25.49■■□□□ 1.67
HMG20B-213ENST00000488973 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
HMG20B-213ENST00000488973 MADDQ8WXG6 1647 aa25.48■■□□□ 1.67
HMG20B-213ENST00000488973 WDR43Q15061 677 aaKnown RBP eCLIP25.47■■□□□ 1.67
HMG20B-213ENST00000488973 KNSTRNQ9Y448 316 aa25.47■■□□□ 1.67
HMG20B-213ENST00000488973 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.47■■□□□ 1.67
HMG20B-213ENST00000488973 ABCC1P33527 1531 aa25.46■■□□□ 1.67
HMG20B-213ENST00000488973 GOLGA2Q08379 1002 aa25.45■■□□□ 1.66
HMG20B-213ENST00000488973 RTN4Q9NQC3 1192 aaKnown RBP25.44■■□□□ 1.66
HMG20B-213ENST00000488973 FAM161AQ3B820 660 aa25.44■■□□□ 1.66
HMG20B-213ENST00000488973 PIK3C2GO75747 1445 aa25.44■■□□□ 1.66
HMG20B-213ENST00000488973 AMER1Q5JTC6 1135 aaPredicted RBP25.43■■□□□ 1.66
HMG20B-213ENST00000488973 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
HMG20B-213ENST00000488973 ASXL2Q76L83 1435 aa25.43■■□□□ 1.66
HMG20B-213ENST00000488973 ASXL1Q8IXJ9 1541 aa25.43■■□□□ 1.66
HMG20B-213ENST00000488973 CDCA8Q53HL2 280 aa25.42■■□□□ 1.66
HMG20B-213ENST00000488973 ABCA9Q8IUA7 1624 aa25.42■■□□□ 1.66
HMG20B-213ENST00000488973 CEP152O94986 1710 aa25.4■■□□□ 1.66
HMG20B-213ENST00000488973 MYOM1P52179 1685 aa25.4■■□□□ 1.66
HMG20B-213ENST00000488973 NPC1L1Q9UHC9 1359 aa25.4■■□□□ 1.66
HMG20B-213ENST00000488973 SLFN5Q08AF3 891 aa25.39■■□□□ 1.66
HMG20B-213ENST00000488973 C8orf34Q49A92 452 aa25.39■■□□□ 1.66
HMG20B-213ENST00000488973 EIF3AQ14152 1382 aaKnown RBP25.39■■□□□ 1.65
HMG20B-213ENST00000488973 NFKBIBQ15653 356 aa25.38■■□□□ 1.65
HMG20B-213ENST00000488973 VIRMAQ69YN4 1812 aaKnown RBP25.38■■□□□ 1.65
HMG20B-213ENST00000488973 TRMT2AQ8IZ69 625 aaKnown RBP25.37■■□□□ 1.65
HMG20B-213ENST00000488973 SCAF11Q99590 1463 aaKnown RBP25.37■■□□□ 1.65
HMG20B-213ENST00000488973 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
HMG20B-213ENST00000488973 GSE1Q14687 1217 aa25.37■■□□□ 1.65
HMG20B-213ENST00000488973 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
HMG20B-213ENST00000488973 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
HMG20B-213ENST00000488973 TRAPPC8Q9Y2L5 1435 aa25.36■■□□□ 1.65
HMG20B-213ENST00000488973 RTEL1-TNFRSF6BF6WH68 1400 aa25.35■■□□□ 1.65
HMG20B-213ENST00000488973 TRPM2O94759 1503 aa25.35■■□□□ 1.65
HMG20B-213ENST00000488973 KDM5AP29375 1690 aaKnown RBP25.33■■□□□ 1.65
HMG20B-213ENST00000488973 FANCAO15360 1455 aa25.33■■□□□ 1.65
HMG20B-213ENST00000488973 NKTRP30414 1462 aaKnown RBP25.32■■□□□ 1.64
HMG20B-213ENST00000488973 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
HMG20B-213ENST00000488973 PODXL2Q9NZ53 605 aa25.31■■□□□ 1.64
HMG20B-213ENST00000488973 SLC4A3P48751 1232 aa25.3■■□□□ 1.64
HMG20B-213ENST00000488973 SPAG9O60271 1321 aaKnown RBP25.27■■□□□ 1.64
HMG20B-213ENST00000488973 NGEFQ8N5V2 710 aa25.26■■□□□ 1.63
HMG20B-213ENST00000488973 PTPRTO14522 1441 aa25.26■■□□□ 1.63
HMG20B-213ENST00000488973 CLTCL1P53675 1640 aa25.26■■□□□ 1.63
HMG20B-213ENST00000488973 PLEKHG5O94827 1062 aa25.25■■□□□ 1.63
HMG20B-213ENST00000488973 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
HMG20B-213ENST00000488973 E9PSI1 815 aa25.24■■□□□ 1.63
HMG20B-213ENST00000488973 RGS3P49796 1198 aa25.24■■□□□ 1.63
HMG20B-213ENST00000488973 GLIPR1L2Q4G1C9 344 aa25.24■■□□□ 1.63
HMG20B-213ENST00000488973 AFAP1Q8N556 730 aa25.24■■□□□ 1.63
HMG20B-213ENST00000488973 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
HMG20B-213ENST00000488973 ADGRL1O94910 1474 aa25.22■■□□□ 1.63
HMG20B-213ENST00000488973 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
HMG20B-213ENST00000488973 APAF1O14727 1248 aa25.22■■□□□ 1.63
HMG20B-213ENST00000488973 SPINK5Q9NQ38 1064 aaPredicted RBP25.22■■□□□ 1.63
HMG20B-213ENST00000488973 NEURL4Q96JN8 1562 aa25.21■■□□□ 1.63
HMG20B-213ENST00000488973 TET3O43151 1660 aa25.21■■□□□ 1.63
HMG20B-213ENST00000488973 FRAT1Q92837 279 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-213ENST00000488973 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.62
HMG20B-213ENST00000488973 CGNL1Q0VF96 1302 aa25.19■■□□□ 1.62
HMG20B-213ENST00000488973 BCAR3O75815 825 aa25.18■■□□□ 1.62
HMG20B-213ENST00000488973 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
HMG20B-213ENST00000488973 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
HMG20B-213ENST00000488973 PDE3AQ14432 1141 aa25.18■■□□□ 1.62
HMG20B-213ENST00000488973 ATP7AQ04656 1500 aa25.16■■□□□ 1.62
HMG20B-213ENST00000488973 CD109Q6YHK3 1445 aa25.16■■□□□ 1.62
HMG20B-213ENST00000488973 BRPF3Q9ULD4 1205 aa25.15■■□□□ 1.62
HMG20B-213ENST00000488973 ERVK-7P63135 1459 aa25.14■■□□□ 1.61
HMG20B-213ENST00000488973 MAP3K4Q9Y6R4 1608 aa25.13■■□□□ 1.61
HMG20B-213ENST00000488973 MAPK8IP3Q9UPT6 1336 aa25.13■■□□□ 1.61
HMG20B-213ENST00000488973 IGHDP01880 384 aa25.13■■□□□ 1.61
HMG20B-213ENST00000488973 CFAP74Q9C0B2 1584 aa25.12■■□□□ 1.61
HMG20B-213ENST00000488973 FRAT2O75474 233 aaPredicted RBP25.12■■□□□ 1.61
HMG20B-213ENST00000488973 USP19O94966 1318 aa25.11■■□□□ 1.61
HMG20B-213ENST00000488973 VWDEQ8N2E2 1590 aa25.11■■□□□ 1.61
HMG20B-213ENST00000488973 MYOM2P54296 1465 aa25.11■■□□□ 1.61
HMG20B-213ENST00000488973 ABCA6Q8N139 1617 aa25.1■■□□□ 1.61
HMG20B-213ENST00000488973 POLR3AO14802 1390 aaPredicted RBP25.1■■□□□ 1.61
HMG20B-213ENST00000488973 ZNF518AQ6AHZ1 1483 aa25.1■■□□□ 1.61
HMG20B-213ENST00000488973 CENPJQ9HC77 1338 aaPredicted RBP25.09■■□□□ 1.61
HMG20B-213ENST00000488973 MYO3AQ8NEV4 1616 aa25.09■■□□□ 1.61
HMG20B-213ENST00000488973 CLUAP1Q96AJ1 413 aa25.09■■□□□ 1.61
HMG20B-213ENST00000488973 KIF1BO60333 1816 aa25.08■■□□□ 1.61
HMG20B-213ENST00000488973 DMRT2Q9Y5R5 561 aa25.08■■□□□ 1.61
HMG20B-213ENST00000488973 IFT172Q9UG01 1749 aa25.08■■□□□ 1.61
HMG20B-213ENST00000488973 CARD14Q9BXL6 1004 aa25.07■■□□□ 1.6
HMG20B-213ENST00000488973 SHPRHQ149N8 1683 aa25.06■■□□□ 1.6
HMG20B-213ENST00000488973 AAMPQ13685 434 aa25.06■■□□□ 1.6
HMG20B-213ENST00000488973 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms