RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 ADGRG1Q9Y653 693 aa11.94□□□□□ -0.5
CUL3-211ENST00000487558 PRKD2Q9BZL6 878 aa11.93□□□□□ -0.5
CUL3-211ENST00000487558 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
CUL3-211ENST00000487558 DNAJB2P25686 324 aa11.92□□□□□ -0.5
CUL3-211ENST00000487558 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
CUL3-211ENST00000487558 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
CUL3-211ENST00000487558 COPS2P61201 443 aa11.91□□□□□ -0.5
CUL3-211ENST00000487558 Q6ZNB5 142 aa11.91□□□□□ -0.5
CUL3-211ENST00000487558 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
CUL3-211ENST00000487558 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
CUL3-211ENST00000487558 LAPTM4AQ15012 233 aa11.9□□□□□ -0.5
CUL3-211ENST00000487558 TMEM134Q9H6X4 195 aa11.9□□□□□ -0.5
CUL3-211ENST00000487558 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
CUL3-211ENST00000487558 ZPR1O75312 459 aa11.88□□□□□ -0.51
CUL3-211ENST00000487558 ZMYND10O75800 440 aa11.88□□□□□ -0.51
CUL3-211ENST00000487558 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
CUL3-211ENST00000487558 PRR14Q9BWN1 585 aa11.88□□□□□ -0.51
CUL3-211ENST00000487558 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
CUL3-211ENST00000487558 GFRA3O60609 400 aa11.87□□□□□ -0.51
CUL3-211ENST00000487558 FCHSD2O94868 740 aa11.87□□□□□ -0.51
CUL3-211ENST00000487558 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
CUL3-211ENST00000487558 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
CUL3-211ENST00000487558 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
CUL3-211ENST00000487558 LCE2BO14633 110 aa11.84□□□□□ -0.51
CUL3-211ENST00000487558 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
CUL3-211ENST00000487558 GGCXP38435 758 aa11.83□□□□□ -0.52
CUL3-211ENST00000487558 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
CUL3-211ENST00000487558 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
CUL3-211ENST00000487558 BARGINQ6ZT62 677 aa11.82□□□□□ -0.52
CUL3-211ENST00000487558 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
CUL3-211ENST00000487558 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
CUL3-211ENST00000487558 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
CUL3-211ENST00000487558 GPIHBP1Q8IV16 184 aa11.81□□□□□ -0.52
CUL3-211ENST00000487558 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
CUL3-211ENST00000487558 NRG2O14511 850 aaPredicted RBP11.8□□□□□ -0.52
CUL3-211ENST00000487558 SLC10A3P09131 477 aa11.8□□□□□ -0.52
CUL3-211ENST00000487558 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
CUL3-211ENST00000487558 OATP04181 439 aa11.78□□□□□ -0.52
CUL3-211ENST00000487558 CFHP08603 1231 aa11.78□□□□□ -0.52
CUL3-211ENST00000487558 HIC1Q14526 733 aa11.78□□□□□ -0.52
CUL3-211ENST00000487558 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
CUL3-211ENST00000487558 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
CUL3-211ENST00000487558 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
CUL3-211ENST00000487558 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
CUL3-211ENST00000487558 TLL1O43897 1013 aa11.75□□□□□ -0.53
CUL3-211ENST00000487558 EMID1Q96A84 441 aaPredicted RBP11.75□□□□□ -0.53
CUL3-211ENST00000487558 AK7Q96M32 723 aa11.75□□□□□ -0.53
CUL3-211ENST00000487558 METTL3Q86U44 580 aaKnown RBP11.74□□□□□ -0.53
CUL3-211ENST00000487558 GPR37O15354 613 aa11.73□□□□□ -0.53
CUL3-211ENST00000487558 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
CUL3-211ENST00000487558 TIMELESSQ9UNS1 1208 aa11.72□□□□□ -0.53
CUL3-211ENST00000487558 FECHP22830 423 aa11.71□□□□□ -0.53
CUL3-211ENST00000487558 GNPATO15228 680 aa11.7□□□□□ -0.54
CUL3-211ENST00000487558 SLC19A1P41440 591 aa11.7□□□□□ -0.54
CUL3-211ENST00000487558 NR1I2O75469 434 aa11.69□□□□□ -0.54
CUL3-211ENST00000487558 S1PR4O95977 384 aa11.69□□□□□ -0.54
CUL3-211ENST00000487558 ANKLE1Q8NAG6 615 aa11.69□□□□□ -0.54
CUL3-211ENST00000487558 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
CUL3-211ENST00000487558 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
CUL3-211ENST00000487558 ADH1BP00325 375 aa11.67□□□□□ -0.54
CUL3-211ENST00000487558 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
CUL3-211ENST00000487558 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
CUL3-211ENST00000487558 SCUBE3Q8IX30 993 aa11.66□□□□□ -0.54
CUL3-211ENST00000487558 SPRYD7Q5W111 196 aa11.65□□□□□ -0.54
CUL3-211ENST00000487558 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
CUL3-211ENST00000487558 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
CUL3-211ENST00000487558 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
CUL3-211ENST00000487558 SLC6A16Q9GZN6 736 aa11.62□□□□□ -0.55
CUL3-211ENST00000487558 TRIM66O15016 1216 aa11.6□□□□□ -0.55
CUL3-211ENST00000487558 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
CUL3-211ENST00000487558 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
CUL3-211ENST00000487558 PRR20EP86478 221 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 PRR20CP86479 221 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 PRR20DP86480 221 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 PRR20BP86481 221 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 PRR20AP86496 221 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 MORN1Q5T089 497 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 C14orf37Q86TY3 774 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 SPSB2Q99619 263 aa11.58□□□□□ -0.56
CUL3-211ENST00000487558 MINK1Q8N4C8 1332 aaPredicted RBP11.58□□□□□ -0.56
CUL3-211ENST00000487558 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
CUL3-211ENST00000487558 PDE4DQ08499 809 aa11.57□□□□□ -0.56
CUL3-211ENST00000487558 GCGRP47871 477 aa11.56□□□□□ -0.56
CUL3-211ENST00000487558 ZNF697Q5TEC3 545 aa11.56□□□□□ -0.56
CUL3-211ENST00000487558 THAP11Q96EK4 314 aa11.56□□□□□ -0.56
CUL3-211ENST00000487558 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
CUL3-211ENST00000487558 GDF9O60383 454 aa11.55□□□□□ -0.56
CUL3-211ENST00000487558 FUT2Q10981 343 aa11.55□□□□□ -0.56
CUL3-211ENST00000487558 ATP6V1AP38606 617 aa11.54□□□□□ -0.56
CUL3-211ENST00000487558 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
CUL3-211ENST00000487558 KDM4CQ9H3R0 1056 aa11.54□□□□□ -0.56
CUL3-211ENST00000487558 DGAT1O75907 488 aa11.53□□□□□ -0.56
CUL3-211ENST00000487558 SULF1Q8IWU6 871 aa11.52□□□□□ -0.57
CUL3-211ENST00000487558 SLC27A5Q9Y2P5 690 aa11.52□□□□□ -0.57
CUL3-211ENST00000487558 IRF6O14896 467 aa11.51□□□□□ -0.57
CUL3-211ENST00000487558 MYT1Q01538 1121 aa11.51□□□□□ -0.57
CUL3-211ENST00000487558 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
CUL3-211ENST00000487558 FAM160A2Q8N612 972 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms