RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	MTUS2	Q5JR59	1369 aa		11.16	□□□□□ -0.62
PUDP-204	ENST00000486446	CDC42BPA	Q5VT25	1732 aa		11.16	□□□□□ -0.62
PUDP-204	ENST00000486446	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.16	□□□□□ -0.62
PUDP-204	ENST00000486446	MYT1L	Q9UL68	1186 aa		11.16	□□□□□ -0.62
PUDP-204	ENST00000486446	YEATS2	Q9ULM3	1422 aa		11.16	□□□□□ -0.62
PUDP-204	ENST00000486446	BCORL1	Q5H9F3	1711 aa		11.15	□□□□□ -0.62
PUDP-204	ENST00000486446	ZNF518A	Q6AHZ1	1483 aa		11.15	□□□□□ -0.62
PUDP-204	ENST00000486446	KIF3C	O14782	793 aa		11.15	□□□□□ -0.62
PUDP-204	ENST00000486446	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.15	□□□□□ -0.62
PUDP-204	ENST00000486446	ADAMTSL3	P82987	1691 aa		11.14	□□□□□ -0.63
PUDP-204	ENST00000486446	ABCC1	P33527	1531 aa		11.14	□□□□□ -0.63
PUDP-204	ENST00000486446	AFAP1	Q8N556	730 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	SPRYD3	Q8NCJ5	442 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	ITSN2	Q9NZM3	1697 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	EHBP1L1	Q8N3D4	1523 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	CCNB3	Q8WWL7	1395 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	MADD	Q8WXG6	1647 aa		11.13	□□□□□ -0.63
PUDP-204	ENST00000486446	SNPH	O15079	494 aa		11.12	□□□□□ -0.63
PUDP-204	ENST00000486446	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.12	□□□□□ -0.63
PUDP-204	ENST00000486446	KDM5C	P41229	1560 aa		11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	MLEC	Q14165	292 aa		11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	LCE2D	Q5TA82	110 aa	Predicted RBP	11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	SIGLEC1	Q9BZZ2	1709 aa		11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	ATP10A	O60312	1499 aa		11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	SAMD9L	Q8IVG5	1584 aa		11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	RIMS1	Q86UR5	1692 aa	Known RBP	11.11	□□□□□ -0.63
PUDP-204	ENST00000486446	C9orf84	Q5VXU9	1444 aa		11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	VPS8	Q8N3P4	1428 aa		11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	TRAPPC8	Q9Y2L5	1435 aa		11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	ARHGEF12	Q9NZN5	1544 aa		11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	C2orf72	A6NCS6	295 aa		11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	TRIM26	Q12899	539 aa	Predicted RBP	11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.1	□□□□□ -0.63
PUDP-204	ENST00000486446	TIAM1	Q13009	1591 aa		11.09	□□□□□ -0.63
PUDP-204	ENST00000486446	FAM163A	Q96GL9	167 aa	Predicted RBP	11.09	□□□□□ -0.63
PUDP-204	ENST00000486446	PCGF6	Q9BYE7	350 aa		11.09	□□□□□ -0.63
PUDP-204	ENST00000486446	SYCP2	Q9BX26	1530 aa		11.09	□□□□□ -0.63
PUDP-204	ENST00000486446	DIP2C	Q9Y2E4	1556 aa		11.08	□□□□□ -0.64
PUDP-204	ENST00000486446	MLH3	Q9UHC1	1453 aa		11.08	□□□□□ -0.64
PUDP-204	ENST00000486446	HOXB3	P14651	431 aa	Predicted RBP	11.08	□□□□□ -0.64
PUDP-204	ENST00000486446	ABCA6	Q8N139	1617 aa		11.08	□□□□□ -0.64
PUDP-204	ENST00000486446	PLEKHH2	Q8IVE3	1493 aa		11.07	□□□□□ -0.64
PUDP-204	ENST00000486446	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.07	□□□□□ -0.64
PUDP-204	ENST00000486446	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.07	□□□□□ -0.64
PUDP-204	ENST00000486446	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.07	□□□□□ -0.64
PUDP-204	ENST00000486446	TMC2	Q8TDI7	906 aa		11.07	□□□□□ -0.64
PUDP-204	ENST00000486446	FER1L4	A9Z1Z3	1794 aa		11.06	□□□□□ -0.64
PUDP-204	ENST00000486446	GPHN	Q9NQX3	736 aa	Predicted RBP	11.06	□□□□□ -0.64
PUDP-204	ENST00000486446	NCOA2	Q15596	1464 aa		11.06	□□□□□ -0.64
PUDP-204	ENST00000486446	ST18	O60284	1047 aa		11.05	□□□□□ -0.64
PUDP-204	ENST00000486446	CRISPLD2	Q9H0B8	497 aa		11.05	□□□□□ -0.64
PUDP-204	ENST00000486446	KIAA1107	Q9UPP5	1409 aa		11.05	□□□□□ -0.64
PUDP-204	ENST00000486446	KIDINS220	Q9ULH0	1771 aa		11.05	□□□□□ -0.64
PUDP-204	ENST00000486446	SPAG9	O60271	1321 aa	Known RBP	11.05	□□□□□ -0.64
PUDP-204	ENST00000486446	RERE	Q9P2R6	1566 aa		11.04	□□□□□ -0.64
PUDP-204	ENST00000486446	ZNF644	Q9H582	1327 aa	Predicted RBP	11.04	□□□□□ -0.64
PUDP-204	ENST00000486446	CFAP44	Q96MT7	982 aa		11.03	□□□□□ -0.64
PUDP-204	ENST00000486446	LRRC9	Q6ZRR7	1453 aa		11.03	□□□□□ -0.64
PUDP-204	ENST00000486446	ATP7A	Q04656	1500 aa		11.03	□□□□□ -0.64
PUDP-204	ENST00000486446	NCKAP5L	Q9HCH0	1330 aa		11.03	□□□□□ -0.64
PUDP-204	ENST00000486446	FOXK1	P85037	733 aa		11.02	□□□□□ -0.65
PUDP-204	ENST00000486446	DOK7	Q18PE1	504 aa		11.02	□□□□□ -0.65
PUDP-204	ENST00000486446	CADPS2	Q86UW7	1296 aa		11.02	□□□□□ -0.65
PUDP-204	ENST00000486446	AGL	P35573	1532 aa		11.01	□□□□□ -0.65
PUDP-204	ENST00000486446	MAP3K1	Q13233	1512 aa		11.01	□□□□□ -0.65
PUDP-204	ENST00000486446	INO80	Q9ULG1	1556 aa	Predicted RBP	11.01	□□□□□ -0.65
PUDP-204	ENST00000486446	PDE4A	P27815	886 aa		11	□□□□□ -0.65
PUDP-204	ENST00000486446	KANK4	Q5T7N3	995 aa	Predicted RBP	11	□□□□□ -0.65
PUDP-204	ENST00000486446	ESF1	Q9H501	851 aa	Known RBP	11	□□□□□ -0.65
PUDP-204	ENST00000486446	CAMSAP2	Q08AD1	1489 aa		11	□□□□□ -0.65
PUDP-204	ENST00000486446	MBD5	Q9P267	1494 aa		10.99	□□□□□ -0.65
PUDP-204	ENST00000486446	DSG2	Q14126	1118 aa		10.98	□□□□□ -0.65
PUDP-204	ENST00000486446	A2M	P01023	1474 aa		10.98	□□□□□ -0.65
PUDP-204	ENST00000486446	SLC34A2	O95436	690 aa		10.97	□□□□□ -0.65
PUDP-204	ENST00000486446	CEBPA	P49715	358 aa	Predicted RBP	10.97	□□□□□ -0.65
PUDP-204	ENST00000486446	ZSWIM6	Q9HCJ5	1215 aa		10.97	□□□□□ -0.65
PUDP-204	ENST00000486446	CCDC141	Q6ZP82	1450 aa		10.97	□□□□□ -0.65
PUDP-204	ENST00000486446	ADGB	Q8N7X0	1667 aa		10.97	□□□□□ -0.65
PUDP-204	ENST00000486446	PLPP6	Q8IY26	295 aa		10.96	□□□□□ -0.65
PUDP-204	ENST00000486446	MYOM3	Q5VTT5	1437 aa		10.95	□□□□□ -0.66
PUDP-204	ENST00000486446	MFSD10	Q14728	455 aa		10.95	□□□□□ -0.66
PUDP-204	ENST00000486446	RSPH4A	Q5TD94	716 aa		10.95	□□□□□ -0.66
PUDP-204	ENST00000486446	ZNF710	Q8N1W2	664 aa		10.95	□□□□□ -0.66
PUDP-204	ENST00000486446	C3	P01024	1663 aa		10.95	□□□□□ -0.66
PUDP-204	ENST00000486446	PLXNC1	O60486	1568 aa		10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	ARHGEF5	Q12774	1597 aa		10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	RIMBP2	O15034	1052 aa		10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	HOXB1	P14653	301 aa	Predicted RBP	10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	PREX1	Q8TCU6	1659 aa		10.94	□□□□□ -0.66
PUDP-204	ENST00000486446	MIA2	Q96PC5	1412 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	CNTLN	Q9NXG0	1405 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	TSPY4	P0CV99	314 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	TSPY10	P0CW01	314 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	GPR153	Q6NV75	609 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	GGT6	Q6P531	493 aa		10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	LARP6	Q9BRS8	491 aa	Known RBP	10.93	□□□□□ -0.66
PUDP-204	ENST00000486446	POTEM	A6NI47	508 aa		10.92	□□□□□ -0.66
PUDP-204	ENST00000486446	ZEB1	P37275	1124 aa	Predicted RBP	10.92	□□□□□ -0.66
PUDP-204	ENST00000486446	PPP1R15B	Q5SWA1	713 aa		10.92	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms