RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
USP16-206ENST00000485067 FANCAO15360 1455 aa12.35□□□□□ -0.43
USP16-206ENST00000485067 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
USP16-206ENST00000485067 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
USP16-206ENST00000485067 ZFYVE16Q7Z3T8 1539 aa12.34□□□□□ -0.43
USP16-206ENST00000485067 ZBED9Q6R2W3 1325 aa12.34□□□□□ -0.43
USP16-206ENST00000485067 ABCA9Q8IUA7 1624 aa12.34□□□□□ -0.43
USP16-206ENST00000485067 EIF2AK4Q9P2K8 1649 aaKnown RBP12.34□□□□□ -0.43
USP16-206ENST00000485067 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
USP16-206ENST00000485067 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
USP16-206ENST00000485067 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
USP16-206ENST00000485067 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
USP16-206ENST00000485067 E9PCH4 1651 aa12.32□□□□□ -0.44
USP16-206ENST00000485067 SCAPERQ9BY12 1400 aa12.32□□□□□ -0.44
USP16-206ENST00000485067 NBPF1Q3BBV0 1214 aa12.31□□□□□ -0.44
USP16-206ENST00000485067 FAM9BQ8IZU0 186 aa12.31□□□□□ -0.44
USP16-206ENST00000485067 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
USP16-206ENST00000485067 ADGRL1O94910 1474 aa12.31□□□□□ -0.44
USP16-206ENST00000485067 A2MP01023 1474 aa12.31□□□□□ -0.44
USP16-206ENST00000485067 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
USP16-206ENST00000485067 CCDC9Q9Y3X0 531 aaKnown RBP12.3□□□□□ -0.44
USP16-206ENST00000485067 ST20-MTHFSA0A0A6YYL1 179 aa12.29□□□□□ -0.44
USP16-206ENST00000485067 HOXD11P31277 338 aaPredicted RBP12.29□□□□□ -0.44
USP16-206ENST00000485067 ATP7AQ04656 1500 aa12.29□□□□□ -0.44
USP16-206ENST00000485067 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
USP16-206ENST00000485067 NBR1Q14596 966 aa12.28□□□□□ -0.44
USP16-206ENST00000485067 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
USP16-206ENST00000485067 DEPDC5O75140 1603 aa12.28□□□□□ -0.44
USP16-206ENST00000485067 BBXQ8WY36 941 aaPredicted RBP12.27□□□□□ -0.44
USP16-206ENST00000485067 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.44
USP16-206ENST00000485067 KIF3BO15066 747 aa12.26□□□□□ -0.45
USP16-206ENST00000485067 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
USP16-206ENST00000485067 RALBP1Q15311 655 aa12.26□□□□□ -0.45
USP16-206ENST00000485067 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
USP16-206ENST00000485067 RNF17Q9BXT8 1623 aaKnown RBP12.25□□□□□ -0.45
USP16-206ENST00000485067 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
USP16-206ENST00000485067 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
USP16-206ENST00000485067 IL27Q8NEV9 243 aa12.25□□□□□ -0.45
USP16-206ENST00000485067 CEP152O94986 1710 aa12.24□□□□□ -0.45
USP16-206ENST00000485067 TRPM2O94759 1503 aa12.24□□□□□ -0.45
USP16-206ENST00000485067 SPHKAPQ2M3C7 1700 aa12.24□□□□□ -0.45
USP16-206ENST00000485067 TET3O43151 1660 aa12.24□□□□□ -0.45
USP16-206ENST00000485067 BRD4O60885 1362 aaPredicted RBP12.24□□□□□ -0.45
USP16-206ENST00000485067 CHRM1P11229 460 aaPredicted RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
USP16-206ENST00000485067 MROH1Q8NDA8 1641 aa12.23□□□□□ -0.45
USP16-206ENST00000485067 CD109Q6YHK3 1445 aa12.23□□□□□ -0.45
USP16-206ENST00000485067 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 CHMP4BQ9H444 224 aaKnown RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 COL17A1Q9UMD9 1497 aaPredicted RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 UGGT1Q9NYU2 1555 aa12.23□□□□□ -0.45
USP16-206ENST00000485067 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
USP16-206ENST00000485067 SENP3-EIF4A1A0A087X0R7 540 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
USP16-206ENST00000485067 TMC1Q8TDI8 760 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 PTPRTO14522 1441 aa12.22□□□□□ -0.45
USP16-206ENST00000485067 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
USP16-206ENST00000485067 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
USP16-206ENST00000485067 VWDEQ8N2E2 1590 aa12.21□□□□□ -0.46
USP16-206ENST00000485067 KANK1Q14678 1352 aa12.21□□□□□ -0.46
USP16-206ENST00000485067 RAPGEF3O95398 923 aa12.21□□□□□ -0.46
USP16-206ENST00000485067 TICAM2Q86XR7 235 aa12.21□□□□□ -0.46
USP16-206ENST00000485067 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
USP16-206ENST00000485067 PPP4R2Q9NY27 417 aa12.2□□□□□ -0.46
USP16-206ENST00000485067 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
USP16-206ENST00000485067 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
USP16-206ENST00000485067 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
USP16-206ENST00000485067 IQGAP1P46940 1657 aa12.18□□□□□ -0.46
USP16-206ENST00000485067 CFAP65Q6ZU64 1925 aaKnown RBP12.18□□□□□ -0.46
USP16-206ENST00000485067 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
USP16-206ENST00000485067 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
USP16-206ENST00000485067 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
USP16-206ENST00000485067 TESK2Q96S53 571 aa12.18□□□□□ -0.46
USP16-206ENST00000485067 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
USP16-206ENST00000485067 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
USP16-206ENST00000485067 TMF1P82094 1093 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 CNPY4Q8N129 248 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 SECISBP2LQ93073 1101 aaKnown RBP12.17□□□□□ -0.46
USP16-206ENST00000485067 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 FRMPD1Q5SYB0 1578 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 CFAP74Q9C0B2 1584 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 PUS7Q96PZ0 661 aaKnown RBP12.17□□□□□ -0.46
USP16-206ENST00000485067 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
USP16-206ENST00000485067 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
USP16-206ENST00000485067 INSRP06213 1382 aa12.16□□□□□ -0.46
USP16-206ENST00000485067 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
USP16-206ENST00000485067 PPRC1Q5VV67 1664 aaKnown RBP12.16□□□□□ -0.46
USP16-206ENST00000485067 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
USP16-206ENST00000485067 GGT6Q6P531 493 aa12.15□□□□□ -0.46
USP16-206ENST00000485067 ABCA6Q8N139 1617 aa12.15□□□□□ -0.47
USP16-206ENST00000485067 FTSJ3Q8IY81 847 aaKnown RBP12.14□□□□□ -0.47
USP16-206ENST00000485067 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
USP16-206ENST00000485067 KIF1BO60333 1816 aa12.13□□□□□ -0.47
USP16-206ENST00000485067 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms