RNA–Protein interactions for RNA: ENST00000484933.6

LINC01140-206, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-206ENST00000484933 ANKRD50Q9ULJ7 1429 aa12.96□□□□□ -0.33
LINC01140-206ENST00000484933 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
LINC01140-206ENST00000484933 TRAK2O60296 914 aa12.95□□□□□ -0.34
LINC01140-206ENST00000484933 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
LINC01140-206ENST00000484933 RAPGEF6Q8TEU7 1601 aa12.94□□□□□ -0.34
LINC01140-206ENST00000484933 PRDM4Q9UKN5 801 aa12.94□□□□□ -0.34
LINC01140-206ENST00000484933 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
LINC01140-206ENST00000484933 KDM5CP41229 1560 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 MRE11P49959 708 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
LINC01140-206ENST00000484933 MCM4P33991 863 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
LINC01140-206ENST00000484933 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 BCAR3O75815 825 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 TPM2P07951 284 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.92□□□□□ -0.34
LINC01140-206ENST00000484933 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
LINC01140-206ENST00000484933 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
LINC01140-206ENST00000484933 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
LINC01140-206ENST00000484933 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
LINC01140-206ENST00000484933 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
LINC01140-206ENST00000484933 MBD5Q9P267 1494 aa12.91□□□□□ -0.34
LINC01140-206ENST00000484933 PARD3Q8TEW0 1356 aa12.91□□□□□ -0.34
LINC01140-206ENST00000484933 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
LINC01140-206ENST00000484933 KDM2BQ8NHM5 1336 aa12.9□□□□□ -0.34
LINC01140-206ENST00000484933 DNMT1P26358 1616 aaKnown RBP12.9□□□□□ -0.34
LINC01140-206ENST00000484933 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.35
LINC01140-206ENST00000484933 TMF1P82094 1093 aa12.89□□□□□ -0.35
LINC01140-206ENST00000484933 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
LINC01140-206ENST00000484933 EFCAB2Q5VUJ9 269 aa12.89□□□□□ -0.35
LINC01140-206ENST00000484933 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
LINC01140-206ENST00000484933 APAF1O14727 1248 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 DUSP27Q5VZP5 1158 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 TBC1D2Q9BYX2 928 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
LINC01140-206ENST00000484933 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 KIF14Q15058 1648 aa12.88□□□□□ -0.35
LINC01140-206ENST00000484933 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
LINC01140-206ENST00000484933 GGT6Q6P531 493 aa12.87□□□□□ -0.35
LINC01140-206ENST00000484933 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
LINC01140-206ENST00000484933 POLR1AO95602 1720 aaPredicted RBP12.86□□□□□ -0.35
LINC01140-206ENST00000484933 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
LINC01140-206ENST00000484933 USP19O94966 1318 aa12.86□□□□□ -0.35
LINC01140-206ENST00000484933 PANK1Q8TE04 598 aa12.86□□□□□ -0.35
LINC01140-206ENST00000484933 IGHDP01880 384 aa12.86□□□□□ -0.35
LINC01140-206ENST00000484933 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
LINC01140-206ENST00000484933 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
LINC01140-206ENST00000484933 SHROOM2Q13796 1616 aa12.86□□□□□ -0.35
LINC01140-206ENST00000484933 TSPOAP1O95153 1857 aa12.85□□□□□ -0.35
LINC01140-206ENST00000484933 ANTXR1Q9H6X2 564 aa12.85□□□□□ -0.35
LINC01140-206ENST00000484933 ABCA8O94911 1581 aa12.85□□□□□ -0.35
LINC01140-206ENST00000484933 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
LINC01140-206ENST00000484933 GPATCH8Q9UKJ3 1502 aaKnown RBP12.84□□□□□ -0.35
LINC01140-206ENST00000484933 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
LINC01140-206ENST00000484933 CD109Q6YHK3 1445 aa12.84□□□□□ -0.35
LINC01140-206ENST00000484933 FOXD4L1Q9NU39 408 aa12.84□□□□□ -0.35
LINC01140-206ENST00000484933 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
LINC01140-206ENST00000484933 GAS2L3Q86XJ1 694 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 ANP32BQ92688 251 aaKnown RBP12.83□□□□□ -0.36
LINC01140-206ENST00000484933 TESK2Q96S53 571 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 RIPK4P57078 832 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
LINC01140-206ENST00000484933 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
LINC01140-206ENST00000484933 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
LINC01140-206ENST00000484933 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
LINC01140-206ENST00000484933 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
LINC01140-206ENST00000484933 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
LINC01140-206ENST00000484933 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
LINC01140-206ENST00000484933 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
LINC01140-206ENST00000484933 WDR7Q9Y4E6 1490 aa12.8□□□□□ -0.36
LINC01140-206ENST00000484933 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
LINC01140-206ENST00000484933 UQCRHP07919 91 aa12.8□□□□□ -0.36
LINC01140-206ENST00000484933 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
LINC01140-206ENST00000484933 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
LINC01140-206ENST00000484933 ERBINQ96RT1 1412 aa12.79□□□□□ -0.36
LINC01140-206ENST00000484933 KIF3BO15066 747 aa12.79□□□□□ -0.36
LINC01140-206ENST00000484933 NCLP19338 710 aaKnown RBP12.79□□□□□ -0.36
LINC01140-206ENST00000484933 CHMP5Q9NZZ3 219 aa12.79□□□□□ -0.36
LINC01140-206ENST00000484933 SPAG9O60271 1321 aaKnown RBP12.79□□□□□ -0.36
LINC01140-206ENST00000484933 BLMP54132 1417 aaPredicted RBP12.78□□□□□ -0.36
LINC01140-206ENST00000484933 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.36
LINC01140-206ENST00000484933 TNNQ9UQP3 1299 aa12.77□□□□□ -0.36
LINC01140-206ENST00000484933 PRAG1Q86YV5 1406 aa12.77□□□□□ -0.37
LINC01140-206ENST00000484933 VGLL3A8MV65 326 aa12.77□□□□□ -0.37
LINC01140-206ENST00000484933 NASPP49321 788 aaPredicted RBP12.77□□□□□ -0.37
LINC01140-206ENST00000484933 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.37
LINC01140-206ENST00000484933 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
LINC01140-206ENST00000484933 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
LINC01140-206ENST00000484933 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
LINC01140-206ENST00000484933 OFD1O75665 1012 aa12.75□□□□□ -0.37
LINC01140-206ENST00000484933 TTC37Q6PGP7 1564 aa12.75□□□□□ -0.37
LINC01140-206ENST00000484933 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
LINC01140-206ENST00000484933 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
LINC01140-206ENST00000484933 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms