RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 GGCXP38435 758 aa11.61□□□□□ -0.55
RC3H1-205ENST00000484867 BLOC1S3Q6QNY0 202 aa11.61□□□□□ -0.55
RC3H1-205ENST00000484867 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
RC3H1-205ENST00000484867 TRIM67Q6ZTA4 783 aa11.6□□□□□ -0.55
RC3H1-205ENST00000484867 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
RC3H1-205ENST00000484867 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
RC3H1-205ENST00000484867 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
RC3H1-205ENST00000484867 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
RC3H1-205ENST00000484867 RCCD1A6NED2 376 aa11.57□□□□□ -0.56
RC3H1-205ENST00000484867 ACTN4O43707 911 aaKnown RBP11.56□□□□□ -0.56
RC3H1-205ENST00000484867 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
RC3H1-205ENST00000484867 TLL1O43897 1013 aa11.54□□□□□ -0.56
RC3H1-205ENST00000484867 SLC10A3P09131 477 aa11.54□□□□□ -0.56
RC3H1-205ENST00000484867 SLC19A1P41440 591 aa11.52□□□□□ -0.57
RC3H1-205ENST00000484867 NUTM2FA1L443 756 aa11.51□□□□□ -0.57
RC3H1-205ENST00000484867 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
RC3H1-205ENST00000484867 CFHP08603 1231 aa11.5□□□□□ -0.57
RC3H1-205ENST00000484867 SPRYD7Q5W111 196 aa11.5□□□□□ -0.57
RC3H1-205ENST00000484867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
RC3H1-205ENST00000484867 FCHSD2O94868 740 aa11.49□□□□□ -0.57
RC3H1-205ENST00000484867 KMT5BQ4FZB7 885 aa11.49□□□□□ -0.57
RC3H1-205ENST00000484867 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
RC3H1-205ENST00000484867 SEMA3EO15041 775 aa11.48□□□□□ -0.57
RC3H1-205ENST00000484867 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
RC3H1-205ENST00000484867 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
RC3H1-205ENST00000484867 S1PR4O95977 384 aa11.47□□□□□ -0.57
RC3H1-205ENST00000484867 ZNF598Q86UK7 904 aaKnown RBP11.47□□□□□ -0.57
RC3H1-205ENST00000484867 ADH1BP00325 375 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 PRR20EP86478 221 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 PRR20CP86479 221 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 PRR20DP86480 221 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 PRR20BP86481 221 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 PRR20AP86496 221 aa11.46□□□□□ -0.57
RC3H1-205ENST00000484867 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
RC3H1-205ENST00000484867 OATP04181 439 aa11.43□□□□□ -0.58
RC3H1-205ENST00000484867 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
RC3H1-205ENST00000484867 GDF9O60383 454 aa11.42□□□□□ -0.58
RC3H1-205ENST00000484867 NR1I2O75469 434 aa11.42□□□□□ -0.58
RC3H1-205ENST00000484867 PLA2G2CQ5R387 149 aa11.42□□□□□ -0.58
RC3H1-205ENST00000484867 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
RC3H1-205ENST00000484867 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
RC3H1-205ENST00000484867 DGAT1O75907 488 aa11.41□□□□□ -0.58
RC3H1-205ENST00000484867 MYT1Q01538 1121 aa11.41□□□□□ -0.58
RC3H1-205ENST00000484867 HIC1Q14526 733 aa11.4□□□□□ -0.58
RC3H1-205ENST00000484867 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
RC3H1-205ENST00000484867 GPR37O15354 613 aa11.39□□□□□ -0.59
RC3H1-205ENST00000484867 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
RC3H1-205ENST00000484867 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
RC3H1-205ENST00000484867 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
RC3H1-205ENST00000484867 FECHP22830 423 aa11.37□□□□□ -0.59
RC3H1-205ENST00000484867 PUS10Q3MIT2 529 aaKnown RBP11.36□□□□□ -0.59
RC3H1-205ENST00000484867 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
RC3H1-205ENST00000484867 PKDCCQ504Y2 493 aa11.35□□□□□ -0.59
RC3H1-205ENST00000484867 POTECB2RU33 542 aa11.34□□□□□ -0.59
RC3H1-205ENST00000484867 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
RC3H1-205ENST00000484867 SPSB2Q99619 263 aa11.33□□□□□ -0.6
RC3H1-205ENST00000484867 PKD2L1Q9P0L9 805 aa11.33□□□□□ -0.6
RC3H1-205ENST00000484867 DAXXQ9UER7 740 aaPredicted RBP11.33□□□□□ -0.6
RC3H1-205ENST00000484867 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
RC3H1-205ENST00000484867 GNPATO15228 680 aa11.32□□□□□ -0.6
RC3H1-205ENST00000484867 MORN1Q5T089 497 aa11.32□□□□□ -0.6
RC3H1-205ENST00000484867 RSPH4AQ5TD94 716 aa11.3□□□□□ -0.6
RC3H1-205ENST00000484867 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
RC3H1-205ENST00000484867 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
RC3H1-205ENST00000484867 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
RC3H1-205ENST00000484867 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
RC3H1-205ENST00000484867 FUT2Q10981 343 aa11.27□□□□□ -0.61
RC3H1-205ENST00000484867 RPIAP49247 311 aa11.26□□□□□ -0.61
RC3H1-205ENST00000484867 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
RC3H1-205ENST00000484867 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
RC3H1-205ENST00000484867 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
RC3H1-205ENST00000484867 GCGRP47871 477 aa11.25□□□□□ -0.61
RC3H1-205ENST00000484867 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
RC3H1-205ENST00000484867 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
RC3H1-205ENST00000484867 SMYD5Q6GMV2 418 aa11.24□□□□□ -0.61
RC3H1-205ENST00000484867 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
RC3H1-205ENST00000484867 ST8SIA5O15466 376 aa11.23□□□□□ -0.61
RC3H1-205ENST00000484867 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
RC3H1-205ENST00000484867 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
RC3H1-205ENST00000484867 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
RC3H1-205ENST00000484867 LCE2AQ5TA79 106 aaPredicted RBP11.22□□□□□ -0.61
RC3H1-205ENST00000484867 BRICD5Q6PL45 260 aa11.22□□□□□ -0.61
RC3H1-205ENST00000484867 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
RC3H1-205ENST00000484867 AVPP01185 164 aa11.21□□□□□ -0.61
RC3H1-205ENST00000484867 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
RC3H1-205ENST00000484867 FOXC1Q12948 553 aa11.2□□□□□ -0.62
RC3H1-205ENST00000484867 PRDM9Q9NQV7 894 aa11.19□□□□□ -0.62
RC3H1-205ENST00000484867 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
RC3H1-205ENST00000484867 CD2BP2O95400 341 aaKnown RBP11.17□□□□□ -0.62
RC3H1-205ENST00000484867 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
RC3H1-205ENST00000484867 MSS51Q4VC12 460 aa11.17□□□□□ -0.62
RC3H1-205ENST00000484867 DACH1Q9UI36 760 aa11.17□□□□□ -0.62
RC3H1-205ENST00000484867 RNF19BQ6ZMZ0 732 aa11.16□□□□□ -0.62
RC3H1-205ENST00000484867 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
RC3H1-205ENST00000484867 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
RC3H1-205ENST00000484867 CD46P15529 392 aa11.11□□□□□ -0.63
RC3H1-205ENST00000484867 MMP16P51512 607 aa11.11□□□□□ -0.63
RC3H1-205ENST00000484867 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
RC3H1-205ENST00000484867 CYP4X1Q8N118 509 aa11.1□□□□□ -0.63
RC3H1-205ENST00000484867 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms