RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
TVP23B-203ENST00000482741 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
TVP23B-203ENST00000482741 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
TVP23B-203ENST00000482741 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
TVP23B-203ENST00000482741 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
TVP23B-203ENST00000482741 IGSF3O75054 1194 aa11.82□□□□□ -0.52
TVP23B-203ENST00000482741 TOPAZ1Q8N9V7 1692 aa11.82□□□□□ -0.52
TVP23B-203ENST00000482741 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
TVP23B-203ENST00000482741 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
TVP23B-203ENST00000482741 DLC1Q96QB1 1528 aa11.81□□□□□ -0.52
TVP23B-203ENST00000482741 IQSEC2Q5JU85 1478 aa11.81□□□□□ -0.52
TVP23B-203ENST00000482741 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
TVP23B-203ENST00000482741 SETD5Q9C0A6 1442 aa11.8□□□□□ -0.52
TVP23B-203ENST00000482741 NEXMIFQ5QGS0 1516 aa11.8□□□□□ -0.52
TVP23B-203ENST00000482741 ALKQ9UM73 1620 aa11.79□□□□□ -0.52
TVP23B-203ENST00000482741 MYO5BQ9ULV0 1848 aa11.79□□□□□ -0.52
TVP23B-203ENST00000482741 MED14O60244 1454 aa11.78□□□□□ -0.52
TVP23B-203ENST00000482741 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.52
TVP23B-203ENST00000482741 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
TVP23B-203ENST00000482741 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
TVP23B-203ENST00000482741 CPS1P31327 1500 aa11.76□□□□□ -0.53
TVP23B-203ENST00000482741 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
TVP23B-203ENST00000482741 ANKRD30AQ9BXX3 1397 aa11.75□□□□□ -0.53
TVP23B-203ENST00000482741 KANK4Q5T7N3 995 aaPredicted RBP11.75□□□□□ -0.53
TVP23B-203ENST00000482741 FAM9AQ8IZU1 332 aaPredicted RBP11.74□□□□□ -0.53
TVP23B-203ENST00000482741 ARHGEF28Q8N1W1 1705 aaKnown RBP11.74□□□□□ -0.53
TVP23B-203ENST00000482741 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
TVP23B-203ENST00000482741 SCAPERQ9BY12 1400 aa11.74□□□□□ -0.53
TVP23B-203ENST00000482741 ANKRD26Q9UPS8 1709 aa11.74□□□□□ -0.53
TVP23B-203ENST00000482741 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
TVP23B-203ENST00000482741 CHD2O14647 1828 aaKnown RBP11.73□□□□□ -0.53
TVP23B-203ENST00000482741 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
TVP23B-203ENST00000482741 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
TVP23B-203ENST00000482741 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.53
TVP23B-203ENST00000482741 PHRF1Q9P1Y6 1649 aaKnown RBP11.7□□□□□ -0.54
TVP23B-203ENST00000482741 APBB1O00213 710 aa11.7□□□□□ -0.54
TVP23B-203ENST00000482741 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
TVP23B-203ENST00000482741 ANKRD50Q9ULJ7 1429 aa11.68□□□□□ -0.54
TVP23B-203ENST00000482741 ADGRB1O14514 1584 aa11.68□□□□□ -0.54
TVP23B-203ENST00000482741 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
TVP23B-203ENST00000482741 MYOM1P52179 1685 aa11.68□□□□□ -0.54
TVP23B-203ENST00000482741 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
TVP23B-203ENST00000482741 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 SPOCK2Q92563 424 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 NRKQ7Z2Y5 1582 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-203ENST00000482741 CRYBG1Q9Y4K1 1723 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-203ENST00000482741 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
TVP23B-203ENST00000482741 STRCQ7RTU9 1775 aa11.66□□□□□ -0.54
TVP23B-203ENST00000482741 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.54
TVP23B-203ENST00000482741 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
TVP23B-203ENST00000482741 DHX57Q6P158 1386 aaKnown RBP11.65□□□□□ -0.54
TVP23B-203ENST00000482741 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.54
TVP23B-203ENST00000482741 TECPR2O15040 1411 aa11.64□□□□□ -0.55
TVP23B-203ENST00000482741 ITSN1Q15811 1721 aa11.64□□□□□ -0.55
TVP23B-203ENST00000482741 MST1RQ04912 1400 aa11.64□□□□□ -0.55
TVP23B-203ENST00000482741 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
TVP23B-203ENST00000482741 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
TVP23B-203ENST00000482741 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
TVP23B-203ENST00000482741 NALCNQ8IZF0 1738 aa11.61□□□□□ -0.55
TVP23B-203ENST00000482741 A2ML1A8K2U0 1454 aa11.61□□□□□ -0.55
TVP23B-203ENST00000482741 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
TVP23B-203ENST00000482741 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
TVP23B-203ENST00000482741 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
TVP23B-203ENST00000482741 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
TVP23B-203ENST00000482741 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
TVP23B-203ENST00000482741 ZMYND15Q9H091 742 aa11.61□□□□□ -0.55
TVP23B-203ENST00000482741 MYT1Q01538 1121 aa11.6□□□□□ -0.55
TVP23B-203ENST00000482741 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
TVP23B-203ENST00000482741 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
TVP23B-203ENST00000482741 ASXL1Q8IXJ9 1541 aa11.59□□□□□ -0.55
TVP23B-203ENST00000482741 MON2Q7Z3U7 1717 aa11.59□□□□□ -0.55
TVP23B-203ENST00000482741 MARF1Q9Y4F3 1742 aaKnown RBP11.59□□□□□ -0.55
TVP23B-203ENST00000482741 RAD21O60216 631 aa11.59□□□□□ -0.55
TVP23B-203ENST00000482741 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
TVP23B-203ENST00000482741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.58□□□□□ -0.56
TVP23B-203ENST00000482741 KCTD17Q8N5Z5 321 aa11.58□□□□□ -0.56
TVP23B-203ENST00000482741 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
TVP23B-203ENST00000482741 ABCC6O95255 1503 aa11.57□□□□□ -0.56
TVP23B-203ENST00000482741 RAB3GAP2Q9H2M9 1393 aa11.57□□□□□ -0.56
TVP23B-203ENST00000482741 FMN2Q9NZ56 1722 aa11.56□□□□□ -0.56
TVP23B-203ENST00000482741 PLCD3Q8N3E9 789 aa11.56□□□□□ -0.56
TVP23B-203ENST00000482741 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
TVP23B-203ENST00000482741 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
TVP23B-203ENST00000482741 SBNO2Q9Y2G9 1366 aa11.55□□□□□ -0.56
TVP23B-203ENST00000482741 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
TVP23B-203ENST00000482741 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
TVP23B-203ENST00000482741 KIF1AQ12756 1690 aa11.53□□□□□ -0.56
TVP23B-203ENST00000482741 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
TVP23B-203ENST00000482741 CDC42BPGQ6DT37 1551 aa11.52□□□□□ -0.57
TVP23B-203ENST00000482741 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
TVP23B-203ENST00000482741 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
TVP23B-203ENST00000482741 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
TVP23B-203ENST00000482741 STRCP1A6NGW2 1772 aa11.51□□□□□ -0.57
TVP23B-203ENST00000482741 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
TVP23B-203ENST00000482741 PIK3R4Q99570 1358 aa11.5□□□□□ -0.57
TVP23B-203ENST00000482741 CDK11BP21127 795 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms