RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 ADGRL2O95490 1459 aa19.73■□□□□ 0.75
LCNL1-204ENST00000482657 SLC12A5Q9H2X9 1139 aa19.72■□□□□ 0.75
LCNL1-204ENST00000482657 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
LCNL1-204ENST00000482657 PARD3Q8TEW0 1356 aa19.71■□□□□ 0.75
LCNL1-204ENST00000482657 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
LCNL1-204ENST00000482657 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
LCNL1-204ENST00000482657 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
LCNL1-204ENST00000482657 SCAPERQ9BY12 1400 aa19.7■□□□□ 0.74
LCNL1-204ENST00000482657 UHRF1BP1Q6BDS2 1440 aa19.7■□□□□ 0.74
LCNL1-204ENST00000482657 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
LCNL1-204ENST00000482657 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
LCNL1-204ENST00000482657 NUP160Q12769 1436 aa19.67■□□□□ 0.74
LCNL1-204ENST00000482657 POGKQ9P215 609 aa19.67■□□□□ 0.74
LCNL1-204ENST00000482657 KDM5CP41229 1560 aa19.67■□□□□ 0.74
LCNL1-204ENST00000482657 ADGRF5Q8IZF2 1346 aa19.67■□□□□ 0.74
LCNL1-204ENST00000482657 DUSP27Q5VZP5 1158 aa19.66■□□□□ 0.74
LCNL1-204ENST00000482657 A2MP01023 1474 aa19.65■□□□□ 0.74
LCNL1-204ENST00000482657 MBD5Q9P267 1494 aa19.65■□□□□ 0.74
LCNL1-204ENST00000482657 E9PSI1 815 aa19.64■□□□□ 0.74
LCNL1-204ENST00000482657 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
LCNL1-204ENST00000482657 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.73
LCNL1-204ENST00000482657 HSP90AA1P07900 732 aaKnown RBP19.64■□□□□ 0.73
LCNL1-204ENST00000482657 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
LCNL1-204ENST00000482657 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
LCNL1-204ENST00000482657 MTHFSP49914 203 aa19.62■□□□□ 0.73
LCNL1-204ENST00000482657 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
LCNL1-204ENST00000482657 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
LCNL1-204ENST00000482657 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
LCNL1-204ENST00000482657 MLECQ14165 292 aa19.61■□□□□ 0.73
LCNL1-204ENST00000482657 ARHGEF12Q9NZN5 1544 aa19.61■□□□□ 0.73
LCNL1-204ENST00000482657 TCP11L2Q8N4U5 519 aa19.61■□□□□ 0.73
LCNL1-204ENST00000482657 NAP1L5Q96NT1 182 aaPredicted RBP19.61■□□□□ 0.73
LCNL1-204ENST00000482657 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
LCNL1-204ENST00000482657 ADGBQ8N7X0 1667 aa19.6■□□□□ 0.73
LCNL1-204ENST00000482657 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
LCNL1-204ENST00000482657 SLC24A1O60721 1099 aa19.58■□□□□ 0.73
LCNL1-204ENST00000482657 GGNBP2Q9H3C7 697 aa19.58■□□□□ 0.72
LCNL1-204ENST00000482657 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
LCNL1-204ENST00000482657 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
LCNL1-204ENST00000482657 MFAP1P55081 439 aaKnown RBP19.56■□□□□ 0.72
LCNL1-204ENST00000482657 SMC4Q9NTJ3 1288 aa19.56■□□□□ 0.72
LCNL1-204ENST00000482657 C8orf34Q49A92 452 aa19.56■□□□□ 0.72
LCNL1-204ENST00000482657 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
LCNL1-204ENST00000482657 PLA2R1Q13018 1463 aa19.55■□□□□ 0.72
LCNL1-204ENST00000482657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
LCNL1-204ENST00000482657 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
LCNL1-204ENST00000482657 TSR2Q969E8 191 aaKnown RBP19.53■□□□□ 0.72
LCNL1-204ENST00000482657 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
LCNL1-204ENST00000482657 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
LCNL1-204ENST00000482657 ELL2O00472 640 aaPredicted RBP19.53■□□□□ 0.72
LCNL1-204ENST00000482657 SOX12O15370 315 aa19.53■□□□□ 0.72
LCNL1-204ENST00000482657 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
LCNL1-204ENST00000482657 ABCA8O94911 1581 aa19.52■□□□□ 0.72
LCNL1-204ENST00000482657 IGHDP01880 384 aa19.52■□□□□ 0.71
LCNL1-204ENST00000482657 RAPGEF3O95398 923 aa19.51■□□□□ 0.71
LCNL1-204ENST00000482657 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
LCNL1-204ENST00000482657 RUNDC1Q96C34 613 aa19.51■□□□□ 0.71
LCNL1-204ENST00000482657 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
LCNL1-204ENST00000482657 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
LCNL1-204ENST00000482657 L1TD1Q5T7N2 865 aaKnown RBP19.5■□□□□ 0.71
LCNL1-204ENST00000482657 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
LCNL1-204ENST00000482657 PLCH2O75038 1416 aa19.47■□□□□ 0.71
LCNL1-204ENST00000482657 RWDD1Q9H446 243 aaPredicted RBP19.47■□□□□ 0.71
LCNL1-204ENST00000482657 GOLGA6L3A6NEY3 463 aa19.47■□□□□ 0.71
LCNL1-204ENST00000482657 SEC24BO95487 1268 aa19.47■□□□□ 0.71
LCNL1-204ENST00000482657 NSD3Q9BZ95 1437 aa19.47■□□□□ 0.71
LCNL1-204ENST00000482657 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
LCNL1-204ENST00000482657 PMFBP1Q8TBY8 1022 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
LCNL1-204ENST00000482657 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 GPRASP1Q5JY77 1395 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 PLEKHG5O94827 1062 aa19.46■□□□□ 0.71
LCNL1-204ENST00000482657 KDM2BQ8NHM5 1336 aa19.45■□□□□ 0.7
LCNL1-204ENST00000482657 NUTM2FA1L443 756 aa19.45■□□□□ 0.7
LCNL1-204ENST00000482657 TRIM44Q96DX7 344 aaPredicted RBP19.45■□□□□ 0.7
LCNL1-204ENST00000482657 STAC3Q96MF2 364 aa19.44■□□□□ 0.7
LCNL1-204ENST00000482657 KDM5DQ9BY66 1539 aa19.44■□□□□ 0.7
LCNL1-204ENST00000482657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.43■□□□□ 0.7
LCNL1-204ENST00000482657 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
LCNL1-204ENST00000482657 VGFO15240 615 aaPredicted RBP19.43■□□□□ 0.7
LCNL1-204ENST00000482657 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
LCNL1-204ENST00000482657 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
LCNL1-204ENST00000482657 PDZRN3Q9UPQ7 1066 aa19.42■□□□□ 0.7
LCNL1-204ENST00000482657 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
LCNL1-204ENST00000482657 APBB1O00213 710 aa19.42■□□□□ 0.7
LCNL1-204ENST00000482657 RSPH6AQ9H0K4 717 aa19.42■□□□□ 0.7
LCNL1-204ENST00000482657 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
LCNL1-204ENST00000482657 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
LCNL1-204ENST00000482657 FBLN1P23142 703 aa19.41■□□□□ 0.7
LCNL1-204ENST00000482657 NOS1P29475 1434 aa19.41■□□□□ 0.7
LCNL1-204ENST00000482657 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
LCNL1-204ENST00000482657 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
LCNL1-204ENST00000482657 RIPK4P57078 832 aa19.41■□□□□ 0.7
LCNL1-204ENST00000482657 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
LCNL1-204ENST00000482657 HMOX1P09601 288 aa19.4■□□□□ 0.7
LCNL1-204ENST00000482657 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.7
LCNL1-204ENST00000482657 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.7
LCNL1-204ENST00000482657 FANCAO15360 1455 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms