RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 NUP155O75694 1391 aa16.95■□□□□ 0.3
HCLS1-206ENST00000479994 CEP152O94986 1710 aa16.94■□□□□ 0.3
HCLS1-206ENST00000479994 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
HCLS1-206ENST00000479994 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
HCLS1-206ENST00000479994 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
HCLS1-206ENST00000479994 COL16A1Q07092 1604 aaPredicted RBP16.92■□□□□ 0.3
HCLS1-206ENST00000479994 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
HCLS1-206ENST00000479994 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
HCLS1-206ENST00000479994 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
HCLS1-206ENST00000479994 ABCC3O15438 1527 aa16.9■□□□□ 0.3
HCLS1-206ENST00000479994 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
HCLS1-206ENST00000479994 RGS12O14924 1447 aa16.89■□□□□ 0.29
HCLS1-206ENST00000479994 FOXD1Q16676 465 aa16.89■□□□□ 0.29
HCLS1-206ENST00000479994 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
HCLS1-206ENST00000479994 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
HCLS1-206ENST00000479994 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
HCLS1-206ENST00000479994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
HCLS1-206ENST00000479994 E9PCH4 1651 aa16.88■□□□□ 0.29
HCLS1-206ENST00000479994 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
HCLS1-206ENST00000479994 SPHKAPQ2M3C7 1700 aa16.87■□□□□ 0.29
HCLS1-206ENST00000479994 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
HCLS1-206ENST00000479994 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
HCLS1-206ENST00000479994 NUTM2DQ5VT03 806 aaPredicted RBP16.86■□□□□ 0.29
HCLS1-206ENST00000479994 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
HCLS1-206ENST00000479994 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
HCLS1-206ENST00000479994 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
HCLS1-206ENST00000479994 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
HCLS1-206ENST00000479994 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
HCLS1-206ENST00000479994 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
HCLS1-206ENST00000479994 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
HCLS1-206ENST00000479994 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
HCLS1-206ENST00000479994 AFF2P51816 1311 aa16.8■□□□□ 0.28
HCLS1-206ENST00000479994 LTKP29376 864 aa16.8■□□□□ 0.28
HCLS1-206ENST00000479994 LRP5O75197 1615 aa16.8■□□□□ 0.28
HCLS1-206ENST00000479994 CFAP65Q6ZU64 1925 aaKnown RBP16.8■□□□□ 0.28
HCLS1-206ENST00000479994 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
HCLS1-206ENST00000479994 TRPM2O94759 1503 aa16.79■□□□□ 0.28
HCLS1-206ENST00000479994 KIF1BO60333 1816 aa16.78■□□□□ 0.28
HCLS1-206ENST00000479994 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
HCLS1-206ENST00000479994 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
HCLS1-206ENST00000479994 EP400Q96L91 3159 aa16.77■□□□□ 0.28
HCLS1-206ENST00000479994 TXNDC2Q86VQ3 553 aa16.76■□□□□ 0.27
HCLS1-206ENST00000479994 ARHGAP23Q9P227 1491 aa16.75■□□□□ 0.27
HCLS1-206ENST00000479994 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
HCLS1-206ENST00000479994 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
HCLS1-206ENST00000479994 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
HCLS1-206ENST00000479994 MSH6P52701 1360 aa16.74■□□□□ 0.27
HCLS1-206ENST00000479994 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
HCLS1-206ENST00000479994 KCNA6P17658 529 aa16.73■□□□□ 0.27
HCLS1-206ENST00000479994 SLIT1O75093 1534 aa16.73■□□□□ 0.27
HCLS1-206ENST00000479994 NOS1P29475 1434 aa16.72■□□□□ 0.27
HCLS1-206ENST00000479994 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
HCLS1-206ENST00000479994 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
HCLS1-206ENST00000479994 ERVK-7P63135 1459 aa16.72■□□□□ 0.27
HCLS1-206ENST00000479994 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
HCLS1-206ENST00000479994 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
HCLS1-206ENST00000479994 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
HCLS1-206ENST00000479994 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
HCLS1-206ENST00000479994 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
HCLS1-206ENST00000479994 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
HCLS1-206ENST00000479994 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
HCLS1-206ENST00000479994 CCDC125Q86Z20 511 aa16.66■□□□□ 0.26
HCLS1-206ENST00000479994 NGLY1Q96IV0 654 aa16.65■□□□□ 0.26
HCLS1-206ENST00000479994 EID1Q9Y6B2 187 aa16.65■□□□□ 0.26
HCLS1-206ENST00000479994 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
HCLS1-206ENST00000479994 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
HCLS1-206ENST00000479994 YY1P25490 414 aa16.62■□□□□ 0.25
HCLS1-206ENST00000479994 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
HCLS1-206ENST00000479994 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
HCLS1-206ENST00000479994 ADGRB3O60242 1522 aa16.61■□□□□ 0.25
HCLS1-206ENST00000479994 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
HCLS1-206ENST00000479994 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
HCLS1-206ENST00000479994 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
HCLS1-206ENST00000479994 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
HCLS1-206ENST00000479994 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
HCLS1-206ENST00000479994 TMEM2Q9UHN6 1383 aa16.58■□□□□ 0.24
HCLS1-206ENST00000479994 PPLO60437 1756 aa16.57■□□□□ 0.24
HCLS1-206ENST00000479994 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
HCLS1-206ENST00000479994 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
HCLS1-206ENST00000479994 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
HCLS1-206ENST00000479994 STAG3Q9UJ98 1225 aa16.56■□□□□ 0.24
HCLS1-206ENST00000479994 CHD2O14647 1828 aaKnown RBP16.55■□□□□ 0.24
HCLS1-206ENST00000479994 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.55■□□□□ 0.24
HCLS1-206ENST00000479994 IDI1Q13907 227 aa16.54■□□□□ 0.24
HCLS1-206ENST00000479994 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
HCLS1-206ENST00000479994 DEFB132Q7Z7B7 95 aa16.53■□□□□ 0.24
HCLS1-206ENST00000479994 MYOM2P54296 1465 aa16.52■□□□□ 0.23
HCLS1-206ENST00000479994 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
HCLS1-206ENST00000479994 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
HCLS1-206ENST00000479994 BRINP3Q76B58 766 aa16.51■□□□□ 0.23
HCLS1-206ENST00000479994 LAMC1P11047 1609 aa16.5■□□□□ 0.23
HCLS1-206ENST00000479994 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.5■□□□□ 0.23
HCLS1-206ENST00000479994 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
HCLS1-206ENST00000479994 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
HCLS1-206ENST00000479994 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
HCLS1-206ENST00000479994 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
HCLS1-206ENST00000479994 CADPS2Q86UW7 1296 aa16.49■□□□□ 0.23
HCLS1-206ENST00000479994 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
HCLS1-206ENST00000479994 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
HCLS1-206ENST00000479994 BCL9LQ86UU0 1499 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms