RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
SSR1-206ENST00000479365 PTPRKQ15262 1439 aa11.46□□□□□ -0.57
SSR1-206ENST00000479365 MYOM3Q5VTT5 1437 aa11.46□□□□□ -0.57
SSR1-206ENST00000479365 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
SSR1-206ENST00000479365 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
SSR1-206ENST00000479365 FBXO41Q8TF61 875 aa11.46□□□□□ -0.57
SSR1-206ENST00000479365 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
SSR1-206ENST00000479365 SETD1BQ9UPS6 1966 aaKnown RBP11.45□□□□□ -0.58
SSR1-206ENST00000479365 KIF3BO15066 747 aa11.45□□□□□ -0.58
SSR1-206ENST00000479365 TRPC6Q9Y210 931 aa11.45□□□□□ -0.58
SSR1-206ENST00000479365 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
SSR1-206ENST00000479365 MAST1Q9Y2H9 1570 aa11.44□□□□□ -0.58
SSR1-206ENST00000479365 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
SSR1-206ENST00000479365 MYO3AQ8NEV4 1616 aa11.43□□□□□ -0.58
SSR1-206ENST00000479365 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
SSR1-206ENST00000479365 TSPY4P0CV99 314 aa11.42□□□□□ -0.58
SSR1-206ENST00000479365 TSPY10P0CW01 314 aa11.42□□□□□ -0.58
SSR1-206ENST00000479365 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
SSR1-206ENST00000479365 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
SSR1-206ENST00000479365 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
SSR1-206ENST00000479365 KDM5DQ9BY66 1539 aa11.41□□□□□ -0.58
SSR1-206ENST00000479365 GABBR2O75899 941 aa11.41□□□□□ -0.58
SSR1-206ENST00000479365 PTPRTO14522 1441 aa11.41□□□□□ -0.58
SSR1-206ENST00000479365 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
SSR1-206ENST00000479365 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.58
SSR1-206ENST00000479365 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
SSR1-206ENST00000479365 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
SSR1-206ENST00000479365 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
SSR1-206ENST00000479365 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
SSR1-206ENST00000479365 ABCC5O15440 1437 aa11.4□□□□□ -0.58
SSR1-206ENST00000479365 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
SSR1-206ENST00000479365 PDAP1Q13442 181 aaKnown RBP11.39□□□□□ -0.59
SSR1-206ENST00000479365 FAM135AQ9P2D6 1515 aa11.39□□□□□ -0.59
SSR1-206ENST00000479365 MROH1Q8NDA8 1641 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
SSR1-206ENST00000479365 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 PZPP20742 1482 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 FGD6Q6ZV73 1430 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 PSEN1P49768 467 aa11.38□□□□□ -0.59
SSR1-206ENST00000479365 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
SSR1-206ENST00000479365 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 ABCC3O15438 1527 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 TNRQ92752 1358 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 A2ML1A8K2U0 1454 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 PLA2R1Q13018 1463 aa11.37□□□□□ -0.59
SSR1-206ENST00000479365 DAPK1P53355 1430 aa11.36□□□□□ -0.59
SSR1-206ENST00000479365 DNMT1P26358 1616 aaKnown RBP11.36□□□□□ -0.59
SSR1-206ENST00000479365 EIF2AK4Q9P2K8 1649 aaKnown RBP11.36□□□□□ -0.59
SSR1-206ENST00000479365 STK25O00506 426 aa11.36□□□□□ -0.59
SSR1-206ENST00000479365 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
SSR1-206ENST00000479365 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
SSR1-206ENST00000479365 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
SSR1-206ENST00000479365 CLCN6P51797 869 aa11.35□□□□□ -0.59
SSR1-206ENST00000479365 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
SSR1-206ENST00000479365 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
SSR1-206ENST00000479365 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
SSR1-206ENST00000479365 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
SSR1-206ENST00000479365 RRP7BPQ9NSQ0 103 aa11.34□□□□□ -0.59
SSR1-206ENST00000479365 HS6ST3Q8IZP7 471 aa11.33□□□□□ -0.6
SSR1-206ENST00000479365 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
SSR1-206ENST00000479365 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
SSR1-206ENST00000479365 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
SSR1-206ENST00000479365 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
SSR1-206ENST00000479365 ERBINQ96RT1 1412 aa11.32□□□□□ -0.6
SSR1-206ENST00000479365 SPATA31D1Q6ZQQ2 1576 aa11.32□□□□□ -0.6
SSR1-206ENST00000479365 ZNF335Q9H4Z2 1342 aaPredicted RBP11.32□□□□□ -0.6
SSR1-206ENST00000479365 PRDM15P57071 1507 aaPredicted RBP11.31□□□□□ -0.6
SSR1-206ENST00000479365 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
SSR1-206ENST00000479365 NEURL4Q96JN8 1562 aa11.31□□□□□ -0.6
SSR1-206ENST00000479365 CEP152O94986 1710 aa11.31□□□□□ -0.6
SSR1-206ENST00000479365 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
SSR1-206ENST00000479365 NLRP1Q9C000 1473 aa11.3□□□□□ -0.6
SSR1-206ENST00000479365 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.29□□□□□ -0.6
SSR1-206ENST00000479365 TIE1P35590 1138 aa11.29□□□□□ -0.6
SSR1-206ENST00000479365 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
SSR1-206ENST00000479365 DEPDC5O75140 1603 aa11.28□□□□□ -0.6
SSR1-206ENST00000479365 ADGRL2O95490 1459 aa11.28□□□□□ -0.6
SSR1-206ENST00000479365 TTLL13PA6NNM8 815 aa11.28□□□□□ -0.6
SSR1-206ENST00000479365 ANKRD30AQ9BXX3 1397 aa11.28□□□□□ -0.6
SSR1-206ENST00000479365 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
SSR1-206ENST00000479365 ARHGAP31Q2M1Z3 1444 aa11.26□□□□□ -0.61
SSR1-206ENST00000479365 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
SSR1-206ENST00000479365 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
SSR1-206ENST00000479365 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
SSR1-206ENST00000479365 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
SSR1-206ENST00000479365 THEMISQ8N1K5 641 aaPredicted RBP11.25□□□□□ -0.61
SSR1-206ENST00000479365 MED14O60244 1454 aa11.25□□□□□ -0.61
SSR1-206ENST00000479365 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
SSR1-206ENST00000479365 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
SSR1-206ENST00000479365 ANKLE2Q86XL3 938 aa11.24□□□□□ -0.61
SSR1-206ENST00000479365 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
SSR1-206ENST00000479365 NPHP4O75161 1426 aaPredicted RBP11.24□□□□□ -0.61
SSR1-206ENST00000479365 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
SSR1-206ENST00000479365 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
SSR1-206ENST00000479365 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
SSR1-206ENST00000479365 KANK1Q14678 1352 aa11.22□□□□□ -0.61
SSR1-206ENST00000479365 NKX1-1Q15270 411 aaPredicted RBP11.22□□□□□ -0.61
SSR1-206ENST00000479365 ASTLQ6HA08 431 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms