RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 TRPM2O94759 1503 aa5.66□□□□□ -1.5
USP25-208ENST00000478932 HECW2Q9P2P5 1572 aa5.65□□□□□ -1.5
USP25-208ENST00000478932 TMEM132EQ6IEE7 984 aa5.65□□□□□ -1.5
USP25-208ENST00000478932 TET3O43151 1660 aa5.65□□□□□ -1.5
USP25-208ENST00000478932 DISP3Q9P2K9 1392 aa5.65□□□□□ -1.5
USP25-208ENST00000478932 CLTCL1P53675 1640 aa5.65□□□□□ -1.5
USP25-208ENST00000478932 STAC3Q96MF2 364 aa5.65□□□□□ -1.51
USP25-208ENST00000478932 ABCA6Q8N139 1617 aa5.65□□□□□ -1.51
USP25-208ENST00000478932 TRPM1Q7Z4N2 1603 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 MAP3K4Q9Y6R4 1608 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 TMF1P82094 1093 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 PANK3Q9H999 370 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 ZNF219Q9P2Y4 722 aaPredicted RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 CFAP74Q9C0B2 1584 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 EFCAB6Q5THR3 1501 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
USP25-208ENST00000478932 PER1O15534 1290 aaPredicted RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 CC2D1BQ5T0F9 858 aaKnown RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 SAMD1Q6SPF0 538 aaPredicted RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 PPRC1Q5VV67 1664 aaKnown RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 EIF2AK4Q9P2K8 1649 aaKnown RBP5.64□□□□□ -1.51
USP25-208ENST00000478932 DIP2BQ9P265 1576 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 TMC1Q8TDI8 760 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 CEP152O94986 1710 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 RICTORQ6R327 1708 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 NOS1P29475 1434 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 GLI2P10070 1586 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 DIP2CQ9Y2E4 1556 aa5.63□□□□□ -1.51
USP25-208ENST00000478932 RNF17Q9BXT8 1623 aaKnown RBP5.63□□□□□ -1.51
USP25-208ENST00000478932 ABCC3O15438 1527 aa5.62□□□□□ -1.51
USP25-208ENST00000478932 LMTK2Q8IWU2 1503 aa5.62□□□□□ -1.51
USP25-208ENST00000478932 VGFO15240 615 aaPredicted RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 C14orf93Q9H972 538 aaKnown RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 SLC52A1Q9NWF4 448 aa5.61□□□□□ -1.51
USP25-208ENST00000478932 STAG3Q9UJ98 1225 aa5.61□□□□□ -1.51
USP25-208ENST00000478932 TRHP20396 242 aaPredicted RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 SAFB2Q14151 953 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP25-208ENST00000478932 PNISRQ8TF01 805 aaKnown RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 STK26Q9P289 416 aa5.61□□□□□ -1.51
USP25-208ENST00000478932 MADDQ8WXG6 1647 aa5.61□□□□□ -1.51
USP25-208ENST00000478932 LHX8Q68G74 356 aa5.61□□□□□ -1.51
USP25-208ENST00000478932 SUPT16HQ9Y5B9 1047 aaKnown RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 SCAF11Q99590 1463 aaKnown RBP5.61□□□□□ -1.51
USP25-208ENST00000478932 POLR1AO95602 1720 aaPredicted RBP5.6□□□□□ -1.51
USP25-208ENST00000478932 ESF1Q9H501 851 aaKnown RBP5.6□□□□□ -1.51
USP25-208ENST00000478932 FKBP8Q14318 412 aa5.6□□□□□ -1.51
USP25-208ENST00000478932 RALBP1Q15311 655 aa5.6□□□□□ -1.51
USP25-208ENST00000478932 KNSTRNQ9Y448 316 aa5.6□□□□□ -1.51
USP25-208ENST00000478932 KIF1BO60333 1816 aa5.59□□□□□ -1.51
USP25-208ENST00000478932 CDCA8Q53HL2 280 aa5.59□□□□□ -1.51
USP25-208ENST00000478932 BCANQ96GW7 911 aa5.59□□□□□ -1.51
USP25-208ENST00000478932 SALL2Q9Y467 1007 aaPredicted RBP5.59□□□□□ -1.51
USP25-208ENST00000478932 RPGRIP1LQ68CZ1 1315 aa5.59□□□□□ -1.51
USP25-208ENST00000478932 MYBBP1AQ9BQG0 1328 aaKnown RBP5.59□□□□□ -1.51
USP25-208ENST00000478932 SIGLEC1Q9BZZ2 1709 aa5.59□□□□□ -1.51
USP25-208ENST00000478932 CENPJQ9HC77 1338 aaPredicted RBP5.59□□□□□ -1.52
USP25-208ENST00000478932 KTN1Q86UP2 1357 aaKnown RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 ARHGAP31Q2M1Z3 1444 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 MYCNP04198 464 aaPredicted RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 NLRP13Q86W25 1043 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 CARD14Q9BXL6 1004 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 SLC12A5Q9H2X9 1139 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 EIF3AQ14152 1382 aaKnown RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 PIK3C2GO75747 1445 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 SYNMO15061 1565 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 MROH2AA6NES4 1674 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 ZBTB22O15209 634 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 CEBPAP49715 358 aaPredicted RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 IRX6P78412 446 aaPredicted RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 AMER1Q5JTC6 1135 aaPredicted RBP5.58□□□□□ -1.52
USP25-208ENST00000478932 MYOM2P54296 1465 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 ADGRB3O60242 1522 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 CAMSAP1Q5T5Y3 1602 aa5.58□□□□□ -1.52
USP25-208ENST00000478932 ZMYM4Q5VZL5 1548 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 KIF13AQ9H1H9 1805 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 LAMC1P11047 1609 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 NRXN1Q9ULB1 1477 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 ZMYM3Q14202 1370 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 PARD3Q8TEW0 1356 aa5.57□□□□□ -1.52
USP25-208ENST00000478932 ZBED9Q6R2W3 1325 aa5.56□□□□□ -1.52
USP25-208ENST00000478932 BRD4O60885 1362 aaPredicted RBP5.56□□□□□ -1.52
USP25-208ENST00000478932 SLC24A1O60721 1099 aa5.56□□□□□ -1.52
USP25-208ENST00000478932 TNNT2P45379 298 aaPredicted RBP5.56□□□□□ -1.52
USP25-208ENST00000478932 CABP2Q9NPB3 220 aa5.56□□□□□ -1.52
USP25-208ENST00000478932 NEURL4Q96JN8 1562 aa5.56□□□□□ -1.52
USP25-208ENST00000478932 IQGAP1P46940 1657 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 NEFLP07196 543 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 PRAM1Q96QH2 718 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 ERVK-7P63135 1459 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 MINK1Q8N4C8 1332 aaPredicted RBP5.55□□□□□ -1.52
USP25-208ENST00000478932 PPP2R1AP30153 589 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 WAPLQ7Z5K2 1190 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 POGKQ9P215 609 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 ADAMTS8Q9UP79 889 aa5.55□□□□□ -1.52
USP25-208ENST00000478932 SRPK2P78362 688 aaKnown RBP5.54□□□□□ -1.52
USP25-208ENST00000478932 PIK3C2BO00750 1634 aa5.54□□□□□ -1.52
USP25-208ENST00000478932 ADGRB1O14514 1584 aa5.54□□□□□ -1.52
USP25-208ENST00000478932 AGLP35573 1532 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms