RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 NOS1P29475 1434 aa11.19□□□□□ -0.62
MSL3-214ENST00000478462 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
MSL3-214ENST00000478462 IDI1Q13907 227 aa11.18□□□□□ -0.62
MSL3-214ENST00000478462 SYNMO15061 1565 aa11.18□□□□□ -0.62
MSL3-214ENST00000478462 CEP170BQ9Y4F5 1589 aaPredicted RBP11.18□□□□□ -0.62
MSL3-214ENST00000478462 A2ML1A8K2U0 1454 aa11.18□□□□□ -0.62
MSL3-214ENST00000478462 LMTK3Q96Q04 1460 aa11.18□□□□□ -0.62
MSL3-214ENST00000478462 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
MSL3-214ENST00000478462 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
MSL3-214ENST00000478462 HSPA2P54652 639 aa11.17□□□□□ -0.62
MSL3-214ENST00000478462 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
MSL3-214ENST00000478462 THEMISQ8N1K5 641 aaPredicted RBP11.17□□□□□ -0.62
MSL3-214ENST00000478462 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
MSL3-214ENST00000478462 KIF1BO60333 1816 aa11.16□□□□□ -0.62
MSL3-214ENST00000478462 MYO5BQ9ULV0 1848 aa11.16□□□□□ -0.62
MSL3-214ENST00000478462 PTPRTO14522 1441 aa11.16□□□□□ -0.62
MSL3-214ENST00000478462 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
MSL3-214ENST00000478462 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
MSL3-214ENST00000478462 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.63
MSL3-214ENST00000478462 TRPM2O94759 1503 aa11.14□□□□□ -0.63
MSL3-214ENST00000478462 PLA2R1Q13018 1463 aa11.13□□□□□ -0.63
MSL3-214ENST00000478462 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
MSL3-214ENST00000478462 KDM5AP29375 1690 aaKnown RBP11.13□□□□□ -0.63
MSL3-214ENST00000478462 CLTCL1P53675 1640 aa11.13□□□□□ -0.63
MSL3-214ENST00000478462 ZNF326Q5BKZ1 582 aaKnown RBP11.12□□□□□ -0.63
MSL3-214ENST00000478462 ADGRB3O60242 1522 aa11.11□□□□□ -0.63
MSL3-214ENST00000478462 TMEM131LA2VDJ0 1609 aa11.11□□□□□ -0.63
MSL3-214ENST00000478462 ANKLE2Q86XL3 938 aa11.11□□□□□ -0.63
MSL3-214ENST00000478462 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
MSL3-214ENST00000478462 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
MSL3-214ENST00000478462 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
MSL3-214ENST00000478462 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
MSL3-214ENST00000478462 ANKRD30BQ9BXX2 1392 aa11.1□□□□□ -0.63
MSL3-214ENST00000478462 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
MSL3-214ENST00000478462 TXNDC2Q86VQ3 553 aa11.09□□□□□ -0.63
MSL3-214ENST00000478462 AKT1S1Q96B36 256 aa11.09□□□□□ -0.63
MSL3-214ENST00000478462 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
MSL3-214ENST00000478462 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
MSL3-214ENST00000478462 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
MSL3-214ENST00000478462 PPP1R15AO75807 674 aaPredicted RBP11.08□□□□□ -0.64
MSL3-214ENST00000478462 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
MSL3-214ENST00000478462 BCANQ96GW7 911 aa11.07□□□□□ -0.64
MSL3-214ENST00000478462 SLIT1O75093 1534 aa11.06□□□□□ -0.64
MSL3-214ENST00000478462 LTKP29376 864 aa11.06□□□□□ -0.64
MSL3-214ENST00000478462 NUTM2DQ5VT03 806 aaPredicted RBP11.06□□□□□ -0.64
MSL3-214ENST00000478462 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSL3-214ENST00000478462 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
MSL3-214ENST00000478462 NEUROD1Q13562 356 aa11.05□□□□□ -0.64
MSL3-214ENST00000478462 SCAF11Q99590 1463 aaKnown RBP11.05□□□□□ -0.64
MSL3-214ENST00000478462 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
MSL3-214ENST00000478462 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
MSL3-214ENST00000478462 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
MSL3-214ENST00000478462 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
MSL3-214ENST00000478462 PPLO60437 1756 aa11.03□□□□□ -0.64
MSL3-214ENST00000478462 SPATA31E1Q6ZUB1 1445 aa11.03□□□□□ -0.64
MSL3-214ENST00000478462 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
MSL3-214ENST00000478462 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
MSL3-214ENST00000478462 NPHP4O75161 1426 aaPredicted RBP11.02□□□□□ -0.64
MSL3-214ENST00000478462 ZFYVE9O95405 1425 aa11.02□□□□□ -0.64
MSL3-214ENST00000478462 IQGAP1P46940 1657 aa11.02□□□□□ -0.64
MSL3-214ENST00000478462 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
MSL3-214ENST00000478462 NEXMIFQ5QGS0 1516 aa11.01□□□□□ -0.65
MSL3-214ENST00000478462 MED14O60244 1454 aa11□□□□□ -0.65
MSL3-214ENST00000478462 DCAF11Q8TEB1 546 aa11□□□□□ -0.65
MSL3-214ENST00000478462 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
MSL3-214ENST00000478462 IFT172Q9UG01 1749 aa11□□□□□ -0.65
MSL3-214ENST00000478462 SLC26A8Q96RN1 970 aa10.99□□□□□ -0.65
MSL3-214ENST00000478462 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
MSL3-214ENST00000478462 PLEKHG1Q9ULL1 1385 aa10.99□□□□□ -0.65
MSL3-214ENST00000478462 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
MSL3-214ENST00000478462 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
MSL3-214ENST00000478462 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
MSL3-214ENST00000478462 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
MSL3-214ENST00000478462 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
MSL3-214ENST00000478462 ADGRF5Q8IZF2 1346 aa10.97□□□□□ -0.65
MSL3-214ENST00000478462 TONSLQ96HA7 1378 aa10.96□□□□□ -0.65
MSL3-214ENST00000478462 REM2Q8IYK8 340 aaPredicted RBP10.96□□□□□ -0.65
MSL3-214ENST00000478462 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.65
MSL3-214ENST00000478462 TBX22Q9Y458 520 aa10.96□□□□□ -0.65
MSL3-214ENST00000478462 SETBP1Q9Y6X0 1596 aa10.94□□□□□ -0.66
MSL3-214ENST00000478462 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
MSL3-214ENST00000478462 MYOM2P54296 1465 aa10.93□□□□□ -0.66
MSL3-214ENST00000478462 ADAMTS13Q76LX8 1427 aa10.93□□□□□ -0.66
MSL3-214ENST00000478462 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
MSL3-214ENST00000478462 ZNF335Q9H4Z2 1342 aaPredicted RBP10.93□□□□□ -0.66
MSL3-214ENST00000478462 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
MSL3-214ENST00000478462 DIP2AQ14689 1571 aa10.93□□□□□ -0.66
MSL3-214ENST00000478462 ALKQ9UM73 1620 aa10.92□□□□□ -0.66
MSL3-214ENST00000478462 HAX1O00165 279 aa10.92□□□□□ -0.66
MSL3-214ENST00000478462 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
MSL3-214ENST00000478462 KCNA6P17658 529 aa10.91□□□□□ -0.66
MSL3-214ENST00000478462 CFAP70Q5T0N1 1121 aa10.91□□□□□ -0.66
MSL3-214ENST00000478462 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
MSL3-214ENST00000478462 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
MSL3-214ENST00000478462 STRCP1A6NGW2 1772 aa10.9□□□□□ -0.66
MSL3-214ENST00000478462 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
MSL3-214ENST00000478462 AMOTL2Q9Y2J4 779 aa10.9□□□□□ -0.66
MSL3-214ENST00000478462 LAMC1P11047 1609 aa10.9□□□□□ -0.66
MSL3-214ENST00000478462 METP08581 1390 aa10.9□□□□□ -0.67
MSL3-214ENST00000478462 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms