RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
U2AF1-210ENST00000478282 NEFMP07197 916 aa19.72■□□□□ 0.75
U2AF1-210ENST00000478282 LAS1LQ9Y4W2 734 aaKnown RBP19.72■□□□□ 0.75
U2AF1-210ENST00000478282 IQGAP3Q86VI3 1631 aa19.71■□□□□ 0.75
U2AF1-210ENST00000478282 NLRP13Q86W25 1043 aa19.71■□□□□ 0.75
U2AF1-210ENST00000478282 A2MP01023 1474 aa19.71■□□□□ 0.75
U2AF1-210ENST00000478282 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
U2AF1-210ENST00000478282 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
U2AF1-210ENST00000478282 YEATS2Q9ULM3 1422 aa19.69■□□□□ 0.74
U2AF1-210ENST00000478282 PRDM15P57071 1507 aaPredicted RBP19.69■□□□□ 0.74
U2AF1-210ENST00000478282 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
U2AF1-210ENST00000478282 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
U2AF1-210ENST00000478282 NUP155O75694 1391 aa19.68■□□□□ 0.74
U2AF1-210ENST00000478282 SALL2Q9Y467 1007 aaPredicted RBP19.68■□□□□ 0.74
U2AF1-210ENST00000478282 AGLP35573 1532 aa19.68■□□□□ 0.74
U2AF1-210ENST00000478282 ATP10AO60312 1499 aa19.66■□□□□ 0.74
U2AF1-210ENST00000478282 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
U2AF1-210ENST00000478282 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
U2AF1-210ENST00000478282 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.74
U2AF1-210ENST00000478282 ANO8Q9HCE9 1232 aaPredicted RBP19.64■□□□□ 0.73
U2AF1-210ENST00000478282 INSRP06213 1382 aa19.63■□□□□ 0.73
U2AF1-210ENST00000478282 DCAF11Q8TEB1 546 aa19.63■□□□□ 0.73
U2AF1-210ENST00000478282 CDCA7LQ96GN5 454 aa19.63■□□□□ 0.73
U2AF1-210ENST00000478282 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
U2AF1-210ENST00000478282 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
U2AF1-210ENST00000478282 FAM135AQ9P2D6 1515 aa19.62■□□□□ 0.73
U2AF1-210ENST00000478282 LMTK2Q8IWU2 1503 aa19.62■□□□□ 0.73
U2AF1-210ENST00000478282 BLMP54132 1417 aaPredicted RBP19.61■□□□□ 0.73
U2AF1-210ENST00000478282 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
U2AF1-210ENST00000478282 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
U2AF1-210ENST00000478282 PLIN1O60240 522 aa19.59■□□□□ 0.73
U2AF1-210ENST00000478282 CRBNQ96SW2 442 aa19.59■□□□□ 0.73
U2AF1-210ENST00000478282 TET3O43151 1660 aa19.58■□□□□ 0.72
U2AF1-210ENST00000478282 ZC3H13Q5T200 1668 aaKnown RBP19.57■□□□□ 0.72
U2AF1-210ENST00000478282 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
U2AF1-210ENST00000478282 RTN4Q9NQC3 1192 aaKnown RBP19.56■□□□□ 0.72
U2AF1-210ENST00000478282 SKAP1Q86WV1 359 aa19.54■□□□□ 0.72
U2AF1-210ENST00000478282 LAMC1P11047 1609 aa19.53■□□□□ 0.72
U2AF1-210ENST00000478282 CEP152O94986 1710 aa19.52■□□□□ 0.72
U2AF1-210ENST00000478282 GPRASP1Q5JY77 1395 aa19.52■□□□□ 0.71
U2AF1-210ENST00000478282 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
U2AF1-210ENST00000478282 ABCC3O15438 1527 aa19.51■□□□□ 0.71
U2AF1-210ENST00000478282 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
U2AF1-210ENST00000478282 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
U2AF1-210ENST00000478282 GSE1Q14687 1217 aa19.5■□□□□ 0.71
U2AF1-210ENST00000478282 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
U2AF1-210ENST00000478282 CAMSAP1Q5T5Y3 1602 aa19.48■□□□□ 0.71
U2AF1-210ENST00000478282 KIF3BO15066 747 aa19.48■□□□□ 0.71
U2AF1-210ENST00000478282 DISP3Q9P2K9 1392 aa19.48■□□□□ 0.71
U2AF1-210ENST00000478282 CCDC144AA2RUR9 1427 aa19.48■□□□□ 0.71
U2AF1-210ENST00000478282 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
U2AF1-210ENST00000478282 NBPF1Q3BBV0 1214 aa19.47■□□□□ 0.71
U2AF1-210ENST00000478282 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
U2AF1-210ENST00000478282 TESK2Q96S53 571 aa19.46■□□□□ 0.71
U2AF1-210ENST00000478282 PTPRTO14522 1441 aa19.45■□□□□ 0.7
U2AF1-210ENST00000478282 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
U2AF1-210ENST00000478282 PLA2R1Q13018 1463 aa19.45■□□□□ 0.7
U2AF1-210ENST00000478282 PANK3Q9H999 370 aa19.45■□□□□ 0.7
U2AF1-210ENST00000478282 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
U2AF1-210ENST00000478282 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
U2AF1-210ENST00000478282 KANK1Q14678 1352 aa19.44■□□□□ 0.7
U2AF1-210ENST00000478282 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
U2AF1-210ENST00000478282 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
U2AF1-210ENST00000478282 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
U2AF1-210ENST00000478282 SLC4A3P48751 1232 aa19.42■□□□□ 0.7
U2AF1-210ENST00000478282 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
U2AF1-210ENST00000478282 TRPM2O94759 1503 aa19.42■□□□□ 0.7
U2AF1-210ENST00000478282 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
U2AF1-210ENST00000478282 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
U2AF1-210ENST00000478282 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
U2AF1-210ENST00000478282 CLTCQ00610 1675 aaKnown RBP19.39■□□□□ 0.7
U2AF1-210ENST00000478282 NEURL4Q96JN8 1562 aa19.39■□□□□ 0.69
U2AF1-210ENST00000478282 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
U2AF1-210ENST00000478282 TMF1P82094 1093 aa19.39■□□□□ 0.69
U2AF1-210ENST00000478282 DUSP27Q5VZP5 1158 aa19.39■□□□□ 0.69
U2AF1-210ENST00000478282 PLEKHH1Q9ULM0 1364 aa19.38■□□□□ 0.69
U2AF1-210ENST00000478282 NPATQ14207 1427 aa19.37■□□□□ 0.69
U2AF1-210ENST00000478282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
U2AF1-210ENST00000478282 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
U2AF1-210ENST00000478282 ZNF521Q96K83 1311 aa19.36■□□□□ 0.69
U2AF1-210ENST00000478282 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
U2AF1-210ENST00000478282 NOS1P29475 1434 aa19.35■□□□□ 0.69
U2AF1-210ENST00000478282 PREX1Q8TCU6 1659 aa19.35■□□□□ 0.69
U2AF1-210ENST00000478282 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
U2AF1-210ENST00000478282 ADAMTSL3P82987 1691 aa19.33■□□□□ 0.69
U2AF1-210ENST00000478282 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
U2AF1-210ENST00000478282 WDR43Q15061 677 aaKnown RBP eCLIP19.33■□□□□ 0.69
U2AF1-210ENST00000478282 GOLGA2Q08379 1002 aa19.33■□□□□ 0.68
U2AF1-210ENST00000478282 GGT6Q6P531 493 aa19.33■□□□□ 0.68
U2AF1-210ENST00000478282 SYNMO15061 1565 aa19.32■□□□□ 0.68
U2AF1-210ENST00000478282 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
U2AF1-210ENST00000478282 PPP2R1AP30153 589 aa19.31■□□□□ 0.68
U2AF1-210ENST00000478282 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
U2AF1-210ENST00000478282 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
U2AF1-210ENST00000478282 FRAT2O75474 233 aaPredicted RBP19.29■□□□□ 0.68
U2AF1-210ENST00000478282 RGS3P49796 1198 aa19.29■□□□□ 0.68
U2AF1-210ENST00000478282 EIF3AQ14152 1382 aaKnown RBP19.29■□□□□ 0.68
U2AF1-210ENST00000478282 SLFN5Q08AF3 891 aa19.28■□□□□ 0.68
U2AF1-210ENST00000478282 KNSTRNQ9Y448 316 aa19.28■□□□□ 0.68
U2AF1-210ENST00000478282 ERVK-7P63135 1459 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms