RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
SYCP3-204ENST00000478139 A0A0G2JS52 829 aa10.37□□□□□ -0.75
SYCP3-204ENST00000478139 PTPRMP28827 1452 aa10.36□□□□□ -0.75
SYCP3-204ENST00000478139 AMOTL2Q9Y2J4 779 aa10.36□□□□□ -0.75
SYCP3-204ENST00000478139 EIF3AQ14152 1382 aaKnown RBP10.36□□□□□ -0.75
SYCP3-204ENST00000478139 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
SYCP3-204ENST00000478139 TMF1P82094 1093 aa10.36□□□□□ -0.75
SYCP3-204ENST00000478139 CFAP65Q6ZU64 1925 aaKnown RBP10.35□□□□□ -0.75
SYCP3-204ENST00000478139 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
SYCP3-204ENST00000478139 MEX3CQ5U5Q3 659 aaKnown RBP10.35□□□□□ -0.75
SYCP3-204ENST00000478139 RIMS2Q9UQ26 1411 aa10.34□□□□□ -0.75
SYCP3-204ENST00000478139 KDM5DQ9BY66 1539 aa10.34□□□□□ -0.75
SYCP3-204ENST00000478139 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
SYCP3-204ENST00000478139 DIP2CQ9Y2E4 1556 aa10.34□□□□□ -0.75
SYCP3-204ENST00000478139 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
SYCP3-204ENST00000478139 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
SYCP3-204ENST00000478139 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
SYCP3-204ENST00000478139 PSME1Q06323 249 aa10.33□□□□□ -0.76
SYCP3-204ENST00000478139 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
SYCP3-204ENST00000478139 NPATQ14207 1427 aa10.33□□□□□ -0.76
SYCP3-204ENST00000478139 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 CADPS2Q86UW7 1296 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 AGLP35573 1532 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 ZMYM4Q5VZL5 1548 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 SOX12O15370 315 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 NEFMP07197 916 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
SYCP3-204ENST00000478139 CCDC9Q9Y3X0 531 aaKnown RBP10.31□□□□□ -0.76
SYCP3-204ENST00000478139 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 PRAM1Q96QH2 718 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 MSH6P52701 1360 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 TMEM2Q9UHN6 1383 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 KDM5CP41229 1560 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 LRRIQ1Q96JM4 1722 aa10.31□□□□□ -0.76
SYCP3-204ENST00000478139 NLRP1Q9C000 1473 aa10.3□□□□□ -0.76
SYCP3-204ENST00000478139 EVC2Q86UK5 1308 aa10.3□□□□□ -0.76
SYCP3-204ENST00000478139 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
SYCP3-204ENST00000478139 ADGBQ8N7X0 1667 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 LTKP29376 864 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 PZPP20742 1482 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 NOS1P29475 1434 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 KCNA6P17658 529 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 ADGRF5Q8IZF2 1346 aa10.29□□□□□ -0.76
SYCP3-204ENST00000478139 MSH5O43196 834 aa10.28□□□□□ -0.76
SYCP3-204ENST00000478139 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
SYCP3-204ENST00000478139 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
SYCP3-204ENST00000478139 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
SYCP3-204ENST00000478139 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
SYCP3-204ENST00000478139 ABCA6Q8N139 1617 aa10.28□□□□□ -0.76
SYCP3-204ENST00000478139 RPRD2Q5VT52 1461 aaKnown RBP10.27□□□□□ -0.76
SYCP3-204ENST00000478139 PPM1GO15355 546 aaPredicted RBP10.27□□□□□ -0.76
SYCP3-204ENST00000478139 KNSTRNQ9Y448 316 aa10.27□□□□□ -0.76
SYCP3-204ENST00000478139 WASHC2AQ641Q2 1341 aa10.27□□□□□ -0.76
SYCP3-204ENST00000478139 MAST1Q9Y2H9 1570 aa10.27□□□□□ -0.77
SYCP3-204ENST00000478139 RIMS1Q86UR5 1692 aaKnown RBP10.27□□□□□ -0.77
SYCP3-204ENST00000478139 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
SYCP3-204ENST00000478139 ABCC3O15438 1527 aa10.27□□□□□ -0.77
SYCP3-204ENST00000478139 NPHP4O75161 1426 aaPredicted RBP10.27□□□□□ -0.77
SYCP3-204ENST00000478139 KIDINS220Q9ULH0 1771 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 NUTM2BA6NNL0 878 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-204ENST00000478139 NUTM2EB1AL46 878 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-204ENST00000478139 NUTM2AQ8IVF1 878 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-204ENST00000478139 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 CCDC184Q52MB2 194 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 C19orf44Q9H6X5 657 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 GPRASP1Q5JY77 1395 aa10.26□□□□□ -0.77
SYCP3-204ENST00000478139 ZNF335Q9H4Z2 1342 aaPredicted RBP10.26□□□□□ -0.77
SYCP3-204ENST00000478139 INO80Q9ULG1 1556 aaPredicted RBP10.25□□□□□ -0.77
SYCP3-204ENST00000478139 ARHGAP31Q2M1Z3 1444 aa10.25□□□□□ -0.77
SYCP3-204ENST00000478139 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
SYCP3-204ENST00000478139 ST20-MTHFSA0A0A6YYL1 179 aa10.25□□□□□ -0.77
SYCP3-204ENST00000478139 PMFBP1Q8TBY8 1022 aa10.25□□□□□ -0.77
SYCP3-204ENST00000478139 RICTORQ6R327 1708 aa10.24□□□□□ -0.77
SYCP3-204ENST00000478139 NBPF1Q3BBV0 1214 aa10.24□□□□□ -0.77
SYCP3-204ENST00000478139 MADDQ8WXG6 1647 aa10.24□□□□□ -0.77
SYCP3-204ENST00000478139 EFCAB6Q5THR3 1501 aa10.23□□□□□ -0.77
SYCP3-204ENST00000478139 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
SYCP3-204ENST00000478139 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
SYCP3-204ENST00000478139 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
SYCP3-204ENST00000478139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYCP3-204ENST00000478139 FAM9BQ8IZU0 186 aa10.21□□□□□ -0.77
SYCP3-204ENST00000478139 FOXO3O43524 673 aa10.21□□□□□ -0.77
SYCP3-204ENST00000478139 EVA1CP58658 441 aa10.21□□□□□ -0.77
SYCP3-204ENST00000478139 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
SYCP3-204ENST00000478139 C11orf95C9JLR9 678 aaPredicted RBP10.21□□□□□ -0.78
SYCP3-204ENST00000478139 TNNT2P45379 298 aaPredicted RBP10.21□□□□□ -0.78
SYCP3-204ENST00000478139 CLTCQ00610 1675 aaKnown RBP10.2□□□□□ -0.78
SYCP3-204ENST00000478139 XPCQ01831 940 aaPredicted RBP10.2□□□□□ -0.78
SYCP3-204ENST00000478139 CDK19Q9BWU1 502 aa10.2□□□□□ -0.78
SYCP3-204ENST00000478139 PPRC1Q5VV67 1664 aaKnown RBP10.19□□□□□ -0.78
SYCP3-204ENST00000478139 PHF8Q9UPP1 1060 aa10.19□□□□□ -0.78
SYCP3-204ENST00000478139 FER1L4A9Z1Z3 1794 aa10.19□□□□□ -0.78
SYCP3-204ENST00000478139 FRMPD1Q5SYB0 1578 aa10.19□□□□□ -0.78
SYCP3-204ENST00000478139 CCDC61Q9Y6R9 512 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 PLEKHG1Q9ULL1 1385 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 EIF2AK4Q9P2K8 1649 aaKnown RBP10.18□□□□□ -0.78
SYCP3-204ENST00000478139 CFAP53Q96M91 514 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 TMEM94Q12767 1356 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms