RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
BRCA1-214ENST00000477152 CEP170BQ9Y4F5 1589 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-214ENST00000477152 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
BRCA1-214ENST00000477152 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
BRCA1-214ENST00000477152 NCOA2Q15596 1464 aa11.42□□□□□ -0.58
BRCA1-214ENST00000477152 KIF3BO15066 747 aa11.42□□□□□ -0.58
BRCA1-214ENST00000477152 CAMSAP2Q08AD1 1489 aa11.42□□□□□ -0.58
BRCA1-214ENST00000477152 BCANQ96GW7 911 aa11.41□□□□□ -0.58
BRCA1-214ENST00000477152 ZNF644Q9H582 1327 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-214ENST00000477152 WASHC2CQ9Y4E1 1318 aa11.41□□□□□ -0.58
BRCA1-214ENST00000477152 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
BRCA1-214ENST00000477152 SGIP1Q9BQI5 828 aa11.41□□□□□ -0.58
BRCA1-214ENST00000477152 A2ML1A8K2U0 1454 aa11.41□□□□□ -0.58
BRCA1-214ENST00000477152 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
BRCA1-214ENST00000477152 LTBP4Q8N2S1 1624 aa11.4□□□□□ -0.58
BRCA1-214ENST00000477152 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
BRCA1-214ENST00000477152 TNRQ92752 1358 aa11.39□□□□□ -0.59
BRCA1-214ENST00000477152 DISP3Q9P2K9 1392 aa11.39□□□□□ -0.59
BRCA1-214ENST00000477152 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
BRCA1-214ENST00000477152 THEMISQ8N1K5 641 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-214ENST00000477152 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
BRCA1-214ENST00000477152 MAP3K1Q13233 1512 aa11.38□□□□□ -0.59
BRCA1-214ENST00000477152 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-214ENST00000477152 PZPP20742 1482 aa11.37□□□□□ -0.59
BRCA1-214ENST00000477152 DNMT1P26358 1616 aaKnown RBP11.37□□□□□ -0.59
BRCA1-214ENST00000477152 ZC3H13Q5T200 1668 aaKnown RBP11.37□□□□□ -0.59
BRCA1-214ENST00000477152 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-214ENST00000477152 ANKLE2Q86XL3 938 aa11.36□□□□□ -0.59
BRCA1-214ENST00000477152 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
BRCA1-214ENST00000477152 NLRP1Q9C000 1473 aa11.36□□□□□ -0.59
BRCA1-214ENST00000477152 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
BRCA1-214ENST00000477152 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
BRCA1-214ENST00000477152 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
BRCA1-214ENST00000477152 MAST1Q9Y2H9 1570 aa11.35□□□□□ -0.59
BRCA1-214ENST00000477152 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-214ENST00000477152 CPS1P31327 1500 aa11.34□□□□□ -0.59
BRCA1-214ENST00000477152 ZNF335Q9H4Z2 1342 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-214ENST00000477152 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
BRCA1-214ENST00000477152 MYOM3Q5VTT5 1437 aa11.33□□□□□ -0.6
BRCA1-214ENST00000477152 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
BRCA1-214ENST00000477152 MAP3K13O43283 966 aa11.33□□□□□ -0.6
BRCA1-214ENST00000477152 TOM1O60784 492 aa11.33□□□□□ -0.6
BRCA1-214ENST00000477152 RNF17Q9BXT8 1623 aaKnown RBP11.32□□□□□ -0.6
BRCA1-214ENST00000477152 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
BRCA1-214ENST00000477152 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
BRCA1-214ENST00000477152 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
BRCA1-214ENST00000477152 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
BRCA1-214ENST00000477152 DEPDC5O75140 1603 aa11.31□□□□□ -0.6
BRCA1-214ENST00000477152 PSEN1P49768 467 aa11.3□□□□□ -0.6
BRCA1-214ENST00000477152 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
BRCA1-214ENST00000477152 KANK1Q14678 1352 aa11.29□□□□□ -0.6
BRCA1-214ENST00000477152 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
BRCA1-214ENST00000477152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
BRCA1-214ENST00000477152 NPHP4O75161 1426 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-214ENST00000477152 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
BRCA1-214ENST00000477152 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
BRCA1-214ENST00000477152 ABCC3O15438 1527 aa11.28□□□□□ -0.6
BRCA1-214ENST00000477152 MED14O60244 1454 aa11.27□□□□□ -0.6
BRCA1-214ENST00000477152 SOCS7O14512 581 aa11.27□□□□□ -0.61
BRCA1-214ENST00000477152 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
BRCA1-214ENST00000477152 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
BRCA1-214ENST00000477152 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
BRCA1-214ENST00000477152 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
BRCA1-214ENST00000477152 NEURL4Q96JN8 1562 aa11.26□□□□□ -0.61
BRCA1-214ENST00000477152 EID1Q9Y6B2 187 aa11.26□□□□□ -0.61
BRCA1-214ENST00000477152 ERBINQ96RT1 1412 aa11.26□□□□□ -0.61
BRCA1-214ENST00000477152 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
BRCA1-214ENST00000477152 CEP152O94986 1710 aa11.25□□□□□ -0.61
BRCA1-214ENST00000477152 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
BRCA1-214ENST00000477152 PTPN23Q9H3S7 1636 aa11.25□□□□□ -0.61
BRCA1-214ENST00000477152 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
BRCA1-214ENST00000477152 CROCC2H7BZ55 1655 aa11.25□□□□□ -0.61
BRCA1-214ENST00000477152 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-214ENST00000477152 KIF15Q9NS87 1388 aa11.24□□□□□ -0.61
BRCA1-214ENST00000477152 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
BRCA1-214ENST00000477152 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
BRCA1-214ENST00000477152 ARHGAP31Q2M1Z3 1444 aa11.23□□□□□ -0.61
BRCA1-214ENST00000477152 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
BRCA1-214ENST00000477152 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
BRCA1-214ENST00000477152 SYNMO15061 1565 aa11.23□□□□□ -0.61
BRCA1-214ENST00000477152 PRDM15P57071 1507 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-214ENST00000477152 RRP7BPQ9NSQ0 103 aa11.22□□□□□ -0.61
BRCA1-214ENST00000477152 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
BRCA1-214ENST00000477152 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
BRCA1-214ENST00000477152 ILDR2Q71H61 639 aa11.21□□□□□ -0.62
BRCA1-214ENST00000477152 EFCAB3Q8N7B9 438 aa11.21□□□□□ -0.62
BRCA1-214ENST00000477152 CABP2Q9NPB3 220 aa11.21□□□□□ -0.62
BRCA1-214ENST00000477152 DAPK1P53355 1430 aa11.21□□□□□ -0.62
BRCA1-214ENST00000477152 SCAF11Q99590 1463 aaKnown RBP11.21□□□□□ -0.62
BRCA1-214ENST00000477152 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
BRCA1-214ENST00000477152 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
BRCA1-214ENST00000477152 ABCC5O15440 1437 aa11.2□□□□□ -0.62
BRCA1-214ENST00000477152 KDM5AP29375 1690 aaKnown RBP11.2□□□□□ -0.62
BRCA1-214ENST00000477152 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
BRCA1-214ENST00000477152 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
BRCA1-214ENST00000477152 SLIT1O75093 1534 aa11.18□□□□□ -0.62
BRCA1-214ENST00000477152 PPP1R37O75864 691 aa11.18□□□□□ -0.62
BRCA1-214ENST00000477152 HSPA1LP34931 641 aa11.18□□□□□ -0.62
BRCA1-214ENST00000477152 HDGFP51858 240 aaKnown RBP11.18□□□□□ -0.62
BRCA1-214ENST00000477152 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 345.4 ms