RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
HLA-DMA-207ENST00000475627 MADDQ8WXG6 1647 aa11.88□□□□□ -0.51
HLA-DMA-207ENST00000475627 ZMYM3Q14202 1370 aa11.87□□□□□ -0.51
HLA-DMA-207ENST00000475627 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
HLA-DMA-207ENST00000475627 NPATQ14207 1427 aa11.86□□□□□ -0.51
HLA-DMA-207ENST00000475627 ECM2O94769 699 aaPredicted RBP11.86□□□□□ -0.51
HLA-DMA-207ENST00000475627 RIMS1Q86UR5 1692 aaKnown RBP11.86□□□□□ -0.51
HLA-DMA-207ENST00000475627 CCDC144AA2RUR9 1427 aa11.86□□□□□ -0.51
HLA-DMA-207ENST00000475627 E9PCH4 1651 aa11.85□□□□□ -0.51
HLA-DMA-207ENST00000475627 TRPM2O94759 1503 aa11.85□□□□□ -0.51
HLA-DMA-207ENST00000475627 ERVK-7P63135 1459 aa11.84□□□□□ -0.51
HLA-DMA-207ENST00000475627 SPHKAPQ2M3C7 1700 aa11.84□□□□□ -0.51
HLA-DMA-207ENST00000475627 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
HLA-DMA-207ENST00000475627 SLC52A1Q9NWF4 448 aa11.83□□□□□ -0.52
HLA-DMA-207ENST00000475627 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
HLA-DMA-207ENST00000475627 TNRQ92752 1358 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 C3P01024 1663 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 ZNF219Q9P2Y4 722 aaPredicted RBP11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 PTPRTO14522 1441 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 NOS1P29475 1434 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 PTPRMP28827 1452 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
HLA-DMA-207ENST00000475627 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
HLA-DMA-207ENST00000475627 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
HLA-DMA-207ENST00000475627 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
HLA-DMA-207ENST00000475627 NEURL4Q96JN8 1562 aa11.78□□□□□ -0.52
HLA-DMA-207ENST00000475627 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
HLA-DMA-207ENST00000475627 SYNMO15061 1565 aa11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 PIK3C2BO00750 1634 aa11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 KDM5AP29375 1690 aaKnown RBP11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 SPOCK2Q92563 424 aa11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
HLA-DMA-207ENST00000475627 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 KIF1BO60333 1816 aa11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 SETD1BQ9UPS6 1966 aaKnown RBP11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
HLA-DMA-207ENST00000475627 RGL2O15211 777 aa11.74□□□□□ -0.53
HLA-DMA-207ENST00000475627 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
HLA-DMA-207ENST00000475627 A2ML1A8K2U0 1454 aa11.74□□□□□ -0.53
HLA-DMA-207ENST00000475627 PLA2R1Q13018 1463 aa11.74□□□□□ -0.53
HLA-DMA-207ENST00000475627 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
HLA-DMA-207ENST00000475627 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 FBXO31Q5XUX0 539 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 CEP170BQ9Y4F5 1589 aaPredicted RBP11.73□□□□□ -0.53
HLA-DMA-207ENST00000475627 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
HLA-DMA-207ENST00000475627 UGGT1Q9NYU2 1555 aa11.72□□□□□ -0.53
HLA-DMA-207ENST00000475627 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
HLA-DMA-207ENST00000475627 THEMISQ8N1K5 641 aaPredicted RBP11.72□□□□□ -0.53
HLA-DMA-207ENST00000475627 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
HLA-DMA-207ENST00000475627 IDI1Q13907 227 aa11.71□□□□□ -0.53
HLA-DMA-207ENST00000475627 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
HLA-DMA-207ENST00000475627 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.7□□□□□ -0.54
HLA-DMA-207ENST00000475627 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
HLA-DMA-207ENST00000475627 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
HLA-DMA-207ENST00000475627 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
HLA-DMA-207ENST00000475627 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
HLA-DMA-207ENST00000475627 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
HLA-DMA-207ENST00000475627 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
HLA-DMA-207ENST00000475627 PPP1R15AO75807 674 aaPredicted RBP11.67□□□□□ -0.54
HLA-DMA-207ENST00000475627 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
HLA-DMA-207ENST00000475627 MYOM2P54296 1465 aa11.66□□□□□ -0.54
HLA-DMA-207ENST00000475627 RGL3Q3MIN7 710 aa11.66□□□□□ -0.54
HLA-DMA-207ENST00000475627 SIN3AQ96ST3 1273 aa11.66□□□□□ -0.54
HLA-DMA-207ENST00000475627 SLIT1O75093 1534 aa11.65□□□□□ -0.54
HLA-DMA-207ENST00000475627 ZFYVE9O95405 1425 aa11.64□□□□□ -0.55
HLA-DMA-207ENST00000475627 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
HLA-DMA-207ENST00000475627 ANKLE2Q86XL3 938 aa11.63□□□□□ -0.55
HLA-DMA-207ENST00000475627 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
HLA-DMA-207ENST00000475627 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
HLA-DMA-207ENST00000475627 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
HLA-DMA-207ENST00000475627 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
HLA-DMA-207ENST00000475627 KLHL34Q8N239 644 aa11.62□□□□□ -0.55
HLA-DMA-207ENST00000475627 PPLO60437 1756 aa11.62□□□□□ -0.55
HLA-DMA-207ENST00000475627 LAMC1P11047 1609 aa11.61□□□□□ -0.55
HLA-DMA-207ENST00000475627 IFT172Q9UG01 1749 aa11.61□□□□□ -0.55
HLA-DMA-207ENST00000475627 L3MBTL2Q969R5 705 aa11.61□□□□□ -0.55
HLA-DMA-207ENST00000475627 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
HLA-DMA-207ENST00000475627 TXNDC2Q86VQ3 553 aa11.6□□□□□ -0.55
HLA-DMA-207ENST00000475627 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
HLA-DMA-207ENST00000475627 DIP2AQ14689 1571 aa11.59□□□□□ -0.55
HLA-DMA-207ENST00000475627 PLEKHG1Q9ULL1 1385 aa11.59□□□□□ -0.55
HLA-DMA-207ENST00000475627 POLR1AO95602 1720 aaPredicted RBP11.59□□□□□ -0.55
HLA-DMA-207ENST00000475627 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
HLA-DMA-207ENST00000475627 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.56
HLA-DMA-207ENST00000475627 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
HLA-DMA-207ENST00000475627 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
HLA-DMA-207ENST00000475627 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
HLA-DMA-207ENST00000475627 KIAA1210Q9ULL0 1709 aa11.56□□□□□ -0.56
HLA-DMA-207ENST00000475627 MED14O60244 1454 aa11.56□□□□□ -0.56
HLA-DMA-207ENST00000475627 NPHP4O75161 1426 aaPredicted RBP11.55□□□□□ -0.56
HLA-DMA-207ENST00000475627 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
HLA-DMA-207ENST00000475627 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
HLA-DMA-207ENST00000475627 RALGAPBQ86X10 1494 aa11.54□□□□□ -0.56
HLA-DMA-207ENST00000475627 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms