RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SYNMO15061 1565 aa10.86□□□□□ -0.67
CKS1B-205ENST00000473344 RRP7BPQ9NSQ0 103 aa10.85□□□□□ -0.67
CKS1B-205ENST00000473344 KIF15Q9NS87 1388 aa10.85□□□□□ -0.67
CKS1B-205ENST00000473344 LOC105371045A0A1W2PR82 267 aa10.84□□□□□ -0.67
CKS1B-205ENST00000473344 KANK1Q14678 1352 aa10.84□□□□□ -0.67
CKS1B-205ENST00000473344 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
CKS1B-205ENST00000473344 LTKP29376 864 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 UBR1Q8IWV7 1749 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 MROH1Q8NDA8 1641 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 ALKQ9UM73 1620 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 ARHGAP31Q2M1Z3 1444 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
CKS1B-205ENST00000473344 CEP152O94986 1710 aa10.82□□□□□ -0.68
CKS1B-205ENST00000473344 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
CKS1B-205ENST00000473344 SLIT1O75093 1534 aa10.81□□□□□ -0.68
CKS1B-205ENST00000473344 PRDM15P57071 1507 aaPredicted RBP10.81□□□□□ -0.68
CKS1B-205ENST00000473344 SSUH2Q9Y2M2 353 aa10.81□□□□□ -0.68
CKS1B-205ENST00000473344 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
CKS1B-205ENST00000473344 STRCP1A6NGW2 1772 aa10.8□□□□□ -0.68
CKS1B-205ENST00000473344 ABCC5O15440 1437 aa10.8□□□□□ -0.68
CKS1B-205ENST00000473344 TMEM2Q9UHN6 1383 aa10.79□□□□□ -0.68
CKS1B-205ENST00000473344 MKRN4PQ13434 485 aaPredicted RBP10.79□□□□□ -0.68
CKS1B-205ENST00000473344 BCANQ96GW7 911 aa10.79□□□□□ -0.68
CKS1B-205ENST00000473344 ANKRD30AQ9BXX3 1397 aa10.78□□□□□ -0.68
CKS1B-205ENST00000473344 DAPK1P53355 1430 aa10.78□□□□□ -0.68
CKS1B-205ENST00000473344 CHIC2Q9UKJ5 165 aa10.78□□□□□ -0.68
CKS1B-205ENST00000473344 PIK3C2BO00750 1634 aa10.77□□□□□ -0.68
CKS1B-205ENST00000473344 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.68
CKS1B-205ENST00000473344 IDI1Q13907 227 aa10.77□□□□□ -0.69
CKS1B-205ENST00000473344 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
CKS1B-205ENST00000473344 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
CKS1B-205ENST00000473344 TMEM94Q12767 1356 aa10.77□□□□□ -0.69
CKS1B-205ENST00000473344 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
CKS1B-205ENST00000473344 KCNA6P17658 529 aa10.76□□□□□ -0.69
CKS1B-205ENST00000473344 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
CKS1B-205ENST00000473344 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
CKS1B-205ENST00000473344 FAM135BQ49AJ0 1406 aa10.75□□□□□ -0.69
CKS1B-205ENST00000473344 CFAP65Q6ZU64 1925 aaKnown RBP10.75□□□□□ -0.69
CKS1B-205ENST00000473344 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
CKS1B-205ENST00000473344 LMTK2Q8IWU2 1503 aa10.74□□□□□ -0.69
CKS1B-205ENST00000473344 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
CKS1B-205ENST00000473344 SLC52A1Q9NWF4 448 aa10.74□□□□□ -0.69
CKS1B-205ENST00000473344 PPP1R15AO75807 674 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-205ENST00000473344 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
CKS1B-205ENST00000473344 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
CKS1B-205ENST00000473344 RGS17Q9UGC6 210 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-205ENST00000473344 MSH6P52701 1360 aa10.73□□□□□ -0.69
CKS1B-205ENST00000473344 KDM5AP29375 1690 aaKnown RBP10.73□□□□□ -0.69
CKS1B-205ENST00000473344 FAM50AQ14320 339 aaKnown RBP10.72□□□□□ -0.69
CKS1B-205ENST00000473344 ADGRB3O60242 1522 aa10.71□□□□□ -0.69
CKS1B-205ENST00000473344 NOS1P29475 1434 aa10.71□□□□□ -0.69
CKS1B-205ENST00000473344 XIRP1Q702N8 1843 aaKnown RBP10.7□□□□□ -0.7
CKS1B-205ENST00000473344 TET3O43151 1660 aa10.7□□□□□ -0.7
CKS1B-205ENST00000473344 NKTRP30414 1462 aaKnown RBP10.7□□□□□ -0.7
CKS1B-205ENST00000473344 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
CKS1B-205ENST00000473344 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
CKS1B-205ENST00000473344 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
CKS1B-205ENST00000473344 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
CKS1B-205ENST00000473344 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
CKS1B-205ENST00000473344 ANKRD50Q9ULJ7 1429 aa10.68□□□□□ -0.7
CKS1B-205ENST00000473344 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
CKS1B-205ENST00000473344 ADGRL2O95490 1459 aa10.68□□□□□ -0.7
CKS1B-205ENST00000473344 PLEKHG1Q9ULL1 1385 aa10.67□□□□□ -0.7
CKS1B-205ENST00000473344 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.67□□□□□ -0.7
CKS1B-205ENST00000473344 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
CKS1B-205ENST00000473344 JCADQ9P266 1359 aa10.66□□□□□ -0.7
CKS1B-205ENST00000473344 RIMS2Q9UQ26 1411 aa10.66□□□□□ -0.7
CKS1B-205ENST00000473344 TBX22Q9Y458 520 aa10.65□□□□□ -0.7
CKS1B-205ENST00000473344 ZFYVE9O95405 1425 aa10.65□□□□□ -0.7
CKS1B-205ENST00000473344 ATF3P18847 181 aa10.64□□□□□ -0.71
CKS1B-205ENST00000473344 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
CKS1B-205ENST00000473344 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
CKS1B-205ENST00000473344 PRR29P0C7W0 189 aa10.63□□□□□ -0.71
CKS1B-205ENST00000473344 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
CKS1B-205ENST00000473344 NCOA3Q9Y6Q9 1424 aa10.63□□□□□ -0.71
CKS1B-205ENST00000473344 PHLPP1O60346 1717 aa10.63□□□□□ -0.71
CKS1B-205ENST00000473344 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
CKS1B-205ENST00000473344 C19orf44Q9H6X5 657 aa10.62□□□□□ -0.71
CKS1B-205ENST00000473344 GCC2Q8IWJ2 1684 aa10.62□□□□□ -0.71
CKS1B-205ENST00000473344 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
CKS1B-205ENST00000473344 SPATA31A6Q5VVP1 1343 aa10.61□□□□□ -0.71
CKS1B-205ENST00000473344 EVX2Q03828 476 aa10.61□□□□□ -0.71
CKS1B-205ENST00000473344 ZNF772Q68DY9 489 aaPredicted RBP10.61□□□□□ -0.71
CKS1B-205ENST00000473344 PIK3R4Q99570 1358 aa10.61□□□□□ -0.71
CKS1B-205ENST00000473344 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
CKS1B-205ENST00000473344 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CKS1B-205ENST00000473344 DIP2AQ14689 1571 aa10.59□□□□□ -0.71
CKS1B-205ENST00000473344 ADAMTS13Q76LX8 1427 aa10.58□□□□□ -0.72
CKS1B-205ENST00000473344 UNC13BO14795 1591 aa10.58□□□□□ -0.72
CKS1B-205ENST00000473344 NUP155O75694 1391 aa10.58□□□□□ -0.72
CKS1B-205ENST00000473344 ITGAEP38570 1179 aa10.58□□□□□ -0.72
CKS1B-205ENST00000473344 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
CKS1B-205ENST00000473344 TRPM2O94759 1503 aa10.58□□□□□ -0.72
CKS1B-205ENST00000473344 ROCK1Q13464 1354 aa10.57□□□□□ -0.72
CKS1B-205ENST00000473344 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
CKS1B-205ENST00000473344 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
CKS1B-205ENST00000473344 MYO5BQ9ULV0 1848 aa10.56□□□□□ -0.72
CKS1B-205ENST00000473344 LRP6O75581 1613 aa10.56□□□□□ -0.72
CKS1B-205ENST00000473344 NUTM2BA6NNL0 878 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-205ENST00000473344 NUTM2EB1AL46 878 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms