RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
ABCF3-210ENST00000473311 MADDQ8WXG6 1647 aa18.33■□□□□ 0.53
ABCF3-210ENST00000473311 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
ABCF3-210ENST00000473311 IQGAP1P46940 1657 aa18.32■□□□□ 0.52
ABCF3-210ENST00000473311 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
ABCF3-210ENST00000473311 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
ABCF3-210ENST00000473311 PODXL2Q9NZ53 605 aa18.31■□□□□ 0.52
ABCF3-210ENST00000473311 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
ABCF3-210ENST00000473311 ABCC1P33527 1531 aa18.31■□□□□ 0.52
ABCF3-210ENST00000473311 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
ABCF3-210ENST00000473311 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
ABCF3-210ENST00000473311 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
ABCF3-210ENST00000473311 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
ABCF3-210ENST00000473311 SPHKAPQ2M3C7 1700 aa18.28■□□□□ 0.52
ABCF3-210ENST00000473311 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
ABCF3-210ENST00000473311 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
ABCF3-210ENST00000473311 SYNMO15061 1565 aa18.28■□□□□ 0.52
ABCF3-210ENST00000473311 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
ABCF3-210ENST00000473311 TRPM2O94759 1503 aa18.27■□□□□ 0.52
ABCF3-210ENST00000473311 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
ABCF3-210ENST00000473311 CEP152O94986 1710 aa18.27■□□□□ 0.51
ABCF3-210ENST00000473311 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
ABCF3-210ENST00000473311 AFAP1Q8N556 730 aa18.26■□□□□ 0.51
ABCF3-210ENST00000473311 CLTCL1P53675 1640 aa18.25■□□□□ 0.51
ABCF3-210ENST00000473311 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
ABCF3-210ENST00000473311 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
ABCF3-210ENST00000473311 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
ABCF3-210ENST00000473311 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
ABCF3-210ENST00000473311 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
ABCF3-210ENST00000473311 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
ABCF3-210ENST00000473311 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
ABCF3-210ENST00000473311 KDM2BQ8NHM5 1336 aa18.22■□□□□ 0.51
ABCF3-210ENST00000473311 NEFMP07197 916 aa18.22■□□□□ 0.51
ABCF3-210ENST00000473311 CENPQQ7L2Z9 268 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-210ENST00000473311 PTPRTO14522 1441 aa18.22■□□□□ 0.51
ABCF3-210ENST00000473311 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-210ENST00000473311 MYOM1P52179 1685 aa18.21■□□□□ 0.51
ABCF3-210ENST00000473311 ZFYVE16Q7Z3T8 1539 aa18.21■□□□□ 0.51
ABCF3-210ENST00000473311 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
ABCF3-210ENST00000473311 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
ABCF3-210ENST00000473311 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
ABCF3-210ENST00000473311 KANK1Q14678 1352 aa18.19■□□□□ 0.5
ABCF3-210ENST00000473311 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
ABCF3-210ENST00000473311 KDM5AP29375 1690 aaKnown RBP18.19■□□□□ 0.5
ABCF3-210ENST00000473311 TET3O43151 1660 aa18.19■□□□□ 0.5
ABCF3-210ENST00000473311 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
ABCF3-210ENST00000473311 APAF1O14727 1248 aa18.18■□□□□ 0.5
ABCF3-210ENST00000473311 DEPDC5O75140 1603 aa18.17■□□□□ 0.5
ABCF3-210ENST00000473311 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
ABCF3-210ENST00000473311 KIF3BO15066 747 aa18.16■□□□□ 0.5
ABCF3-210ENST00000473311 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
ABCF3-210ENST00000473311 KIAA1210Q9ULL0 1709 aa18.14■□□□□ 0.5
ABCF3-210ENST00000473311 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.5
ABCF3-210ENST00000473311 NKTRP30414 1462 aaKnown RBP18.13■□□□□ 0.49
ABCF3-210ENST00000473311 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
ABCF3-210ENST00000473311 FAM161AQ3B820 660 aa18.13■□□□□ 0.49
ABCF3-210ENST00000473311 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
ABCF3-210ENST00000473311 RGS3P49796 1198 aa18.13■□□□□ 0.49
ABCF3-210ENST00000473311 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
ABCF3-210ENST00000473311 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
ABCF3-210ENST00000473311 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
ABCF3-210ENST00000473311 UGGT1Q9NYU2 1555 aa18.11■□□□□ 0.49
ABCF3-210ENST00000473311 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
ABCF3-210ENST00000473311 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
ABCF3-210ENST00000473311 BCAR3O75815 825 aa18.11■□□□□ 0.49
ABCF3-210ENST00000473311 E9PSI1 815 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 GSE1Q14687 1217 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 ABCA6Q8N139 1617 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 C8orf34Q49A92 452 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 ZMYND15Q9H091 742 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
ABCF3-210ENST00000473311 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-210ENST00000473311 FANCAO15360 1455 aa18.09■□□□□ 0.49
ABCF3-210ENST00000473311 CARD14Q9BXL6 1004 aa18.09■□□□□ 0.49
ABCF3-210ENST00000473311 KIF1BO60333 1816 aa18.08■□□□□ 0.49
ABCF3-210ENST00000473311 MYOM2P54296 1465 aa18.07■□□□□ 0.48
ABCF3-210ENST00000473311 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
ABCF3-210ENST00000473311 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
ABCF3-210ENST00000473311 NEURL4Q96JN8 1562 aa18.06■□□□□ 0.48
ABCF3-210ENST00000473311 ADGRL1O94910 1474 aa18.05■□□□□ 0.48
ABCF3-210ENST00000473311 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
ABCF3-210ENST00000473311 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
ABCF3-210ENST00000473311 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
ABCF3-210ENST00000473311 MROH1Q8NDA8 1641 aa18.04■□□□□ 0.48
ABCF3-210ENST00000473311 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
ABCF3-210ENST00000473311 CENPJQ9HC77 1338 aaPredicted RBP18.02■□□□□ 0.48
ABCF3-210ENST00000473311 MROH2AA6NES4 1674 aa18.02■□□□□ 0.48
ABCF3-210ENST00000473311 NFKBIBQ15653 356 aa18.02■□□□□ 0.48
ABCF3-210ENST00000473311 IFT172Q9UG01 1749 aa18.02■□□□□ 0.48
ABCF3-210ENST00000473311 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
ABCF3-210ENST00000473311 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.47
ABCF3-210ENST00000473311 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.47
ABCF3-210ENST00000473311 POLR3AO14802 1390 aaPredicted RBP18.02■□□□□ 0.47
ABCF3-210ENST00000473311 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
ABCF3-210ENST00000473311 WWC1Q8IX03 1113 aa18.01■□□□□ 0.47
ABCF3-210ENST00000473311 CGNL1Q0VF96 1302 aa18.01■□□□□ 0.47
ABCF3-210ENST00000473311 IGHDP01880 384 aa18■□□□□ 0.47
ABCF3-210ENST00000473311 MORC1Q86VD1 984 aa18■□□□□ 0.47
ABCF3-210ENST00000473311 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms