RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 MRC2Q9UBG0 1479 aa10.15□□□□□ -0.78
TPM3-215ENST00000469717 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
TPM3-215ENST00000469717 HNRNPMP52272 730 aaKnown RBP eCLIP10.15□□□□□ -0.787e-7■■■□□ 16.5
TPM3-215ENST00000469717 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
TPM3-215ENST00000469717 NEUROD2Q15784 382 aa10.15□□□□□ -0.79
TPM3-215ENST00000469717 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.79
TPM3-215ENST00000469717 PCDHB15Q9Y5E8 787 aa10.15□□□□□ -0.79
TPM3-215ENST00000469717 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
TPM3-215ENST00000469717 ESPNB1AK53 854 aa10.14□□□□□ -0.79
TPM3-215ENST00000469717 GGT6Q6P531 493 aa10.14□□□□□ -0.79
TPM3-215ENST00000469717 GAS2L3Q86XJ1 694 aa10.14□□□□□ -0.79
TPM3-215ENST00000469717 NUP153P49790 1475 aaKnown RBP10.14□□□□□ -0.79
TPM3-215ENST00000469717 ANKRD30AQ9BXX3 1397 aa10.14□□□□□ -0.79
TPM3-215ENST00000469717 RLBP1P12271 317 aa10.14□□□□□ -0.79
TPM3-215ENST00000469717 COL17A1Q9UMD9 1497 aaPredicted RBP10.13□□□□□ -0.79
TPM3-215ENST00000469717 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
TPM3-215ENST00000469717 ARID3AQ99856 593 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 GRPEL1Q9HAV7 217 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 PRAG1Q86YV5 1406 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 PLEKHH2Q8IVE3 1493 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 MFAP1P55081 439 aaKnown RBP10.13□□□□□ -0.79
TPM3-215ENST00000469717 MYH16Q9H6N6 1097 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 PTPRGP23470 1445 aa10.13□□□□□ -0.79
TPM3-215ENST00000469717 KIF21AQ7Z4S6 1674 aa10.12□□□□□ -0.79
TPM3-215ENST00000469717 IQGAP2Q13576 1575 aa10.12□□□□□ -0.79
TPM3-215ENST00000469717 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
TPM3-215ENST00000469717 RRP7AQ9Y3A4 280 aaKnown RBP10.12□□□□□ -0.79
TPM3-215ENST00000469717 KNSTRNQ9Y448 316 aa10.12□□□□□ -0.79
TPM3-215ENST00000469717 ERBINQ96RT1 1412 aa10.12□□□□□ -0.79
TPM3-215ENST00000469717 FGD1P98174 961 aa10.11□□□□□ -0.79
TPM3-215ENST00000469717 GPATCH8Q9UKJ3 1502 aaKnown RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 KDM5DQ9BY66 1539 aa10.11□□□□□ -0.79
TPM3-215ENST00000469717 RBM10P98175 930 aaKnown RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 TRMT2AQ8IZ69 625 aaKnown RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 TMF1P82094 1093 aa10.11□□□□□ -0.79
TPM3-215ENST00000469717 AMER1Q5JTC6 1135 aaPredicted RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 NKTRP30414 1462 aaKnown RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
TPM3-215ENST00000469717 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
TPM3-215ENST00000469717 MAPK8IP3Q9UPT6 1336 aa10.1□□□□□ -0.79
TPM3-215ENST00000469717 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
TPM3-215ENST00000469717 MRE11P49959 708 aa10.1□□□□□ -0.79
TPM3-215ENST00000469717 CEP170Q5SW79 1584 aa10.09□□□□□ -0.79
TPM3-215ENST00000469717 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
TPM3-215ENST00000469717 ADGBQ8N7X0 1667 aa10.09□□□□□ -0.79
TPM3-215ENST00000469717 CGNL1Q0VF96 1302 aa10.08□□□□□ -0.8
TPM3-215ENST00000469717 ADGRL2O95490 1459 aa10.08□□□□□ -0.8
TPM3-215ENST00000469717 A2MP01023 1474 aa10.08□□□□□ -0.8
TPM3-215ENST00000469717 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
TPM3-215ENST00000469717 C9orf84Q5VXU9 1444 aa10.08□□□□□ -0.8
TPM3-215ENST00000469717 A0A0U1RQG5 324 aaPredicted RBP10.07□□□□□ -0.8
TPM3-215ENST00000469717 TRIM44Q96DX7 344 aaPredicted RBP10.07□□□□□ -0.8
TPM3-215ENST00000469717 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
TPM3-215ENST00000469717 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
TPM3-215ENST00000469717 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
TPM3-215ENST00000469717 INSRP06213 1382 aa10.07□□□□□ -0.8
TPM3-215ENST00000469717 PLB1Q6P1J6 1458 aa10.07□□□□□ -0.8
TPM3-215ENST00000469717 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
TPM3-215ENST00000469717 FAM69CQ0P6D2 419 aa10.06□□□□□ -0.8
TPM3-215ENST00000469717 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
TPM3-215ENST00000469717 WDR7Q9Y4E6 1490 aa10.06□□□□□ -0.8
TPM3-215ENST00000469717 TROQ12816 1431 aaPredicted RBP10.06□□□□□ -0.8
TPM3-215ENST00000469717 E9PSI1 815 aa10.06□□□□□ -0.8
TPM3-215ENST00000469717 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
TPM3-215ENST00000469717 PDE3AQ14432 1141 aa10.05□□□□□ -0.8
TPM3-215ENST00000469717 TNPO1Q92973 898 aaKnown RBP10.05□□□□□ -0.8
TPM3-215ENST00000469717 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
TPM3-215ENST00000469717 CROCC2H7BZ55 1655 aa10.05□□□□□ -0.8
TPM3-215ENST00000469717 WWC1Q8IX03 1113 aa10.04□□□□□ -0.8
TPM3-215ENST00000469717 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
TPM3-215ENST00000469717 BCL11BQ9C0K0 894 aaPredicted RBP10.04□□□□□ -0.8
TPM3-215ENST00000469717 GPRASP1Q5JY77 1395 aa10.04□□□□□ -0.8
TPM3-215ENST00000469717 RARSP54136 660 aaKnown RBP10.04□□□□□ -0.8
TPM3-215ENST00000469717 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 PRDM15P57071 1507 aaPredicted RBP10.03□□□□□ -0.8
TPM3-215ENST00000469717 CD2BP2O95400 341 aaKnown RBP10.03□□□□□ -0.8
TPM3-215ENST00000469717 RIPK4P57078 832 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 TAF7LQ5H9L4 462 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 RAPGEF6Q8TEU7 1601 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
TPM3-215ENST00000469717 IFT140Q96RY7 1462 aa10.02□□□□□ -0.8
TPM3-215ENST00000469717 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.81
TPM3-215ENST00000469717 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
TPM3-215ENST00000469717 ADCY10Q96PN6 1610 aa10.02□□□□□ -0.81
TPM3-215ENST00000469717 KIF3BO15066 747 aa10.02□□□□□ -0.81
TPM3-215ENST00000469717 EIF4G3O43432 1585 aaKnown RBP10.02□□□□□ -0.81
TPM3-215ENST00000469717 HSCBQ8IWL3 235 aa10.02□□□□□ -0.81
TPM3-215ENST00000469717 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
TPM3-215ENST00000469717 AAMPQ13685 434 aa10.01□□□□□ -0.81
TPM3-215ENST00000469717 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
TPM3-215ENST00000469717 CDC42BPAQ5VT25 1732 aa10.01□□□□□ -0.81
TPM3-215ENST00000469717 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
TPM3-215ENST00000469717 KIAA0556O60303 1618 aa10.01□□□□□ -0.81
TPM3-215ENST00000469717 DDX11L8A8MPP1 907 aa10□□□□□ -0.81
TPM3-215ENST00000469717 PRDM4Q9UKN5 801 aa10□□□□□ -0.81
TPM3-215ENST00000469717 PRDM10Q9NQV6 1147 aa10□□□□□ -0.81
TPM3-215ENST00000469717 R3HCC1Q9Y3T6 440 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms