RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SPTA1-204ENST00000467387 RTEL1-TNFRSF6BF6WH68 1400 aa11.9□□□□□ -0.5
SPTA1-204ENST00000467387 TOM1O60784 492 aa11.9□□□□□ -0.5
SPTA1-204ENST00000467387 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
SPTA1-204ENST00000467387 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
SPTA1-204ENST00000467387 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
SPTA1-204ENST00000467387 FAM135AQ9P2D6 1515 aa11.9□□□□□ -0.5
SPTA1-204ENST00000467387 DHX29Q7Z478 1369 aaKnown RBP11.9□□□□□ -0.5
SPTA1-204ENST00000467387 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
SPTA1-204ENST00000467387 NEURL4Q96JN8 1562 aa11.89□□□□□ -0.51
SPTA1-204ENST00000467387 HSPA1LP34931 641 aa11.89□□□□□ -0.51
SPTA1-204ENST00000467387 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
SPTA1-204ENST00000467387 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
SPTA1-204ENST00000467387 RGL2O15211 777 aa11.88□□□□□ -0.51
SPTA1-204ENST00000467387 CLCN6P51797 869 aa11.88□□□□□ -0.51
SPTA1-204ENST00000467387 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
SPTA1-204ENST00000467387 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
SPTA1-204ENST00000467387 ANKLE2Q86XL3 938 aa11.87□□□□□ -0.51
SPTA1-204ENST00000467387 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
SPTA1-204ENST00000467387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTA1-204ENST00000467387 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
SPTA1-204ENST00000467387 NLRP1Q9C000 1473 aa11.87□□□□□ -0.51
SPTA1-204ENST00000467387 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
SPTA1-204ENST00000467387 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
SPTA1-204ENST00000467387 NPHP4O75161 1426 aaPredicted RBP11.86□□□□□ -0.51
SPTA1-204ENST00000467387 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
SPTA1-204ENST00000467387 THEMISQ8N1K5 641 aaPredicted RBP11.85□□□□□ -0.51
SPTA1-204ENST00000467387 MIA2Q96PC5 1412 aa11.84□□□□□ -0.51
SPTA1-204ENST00000467387 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
SPTA1-204ENST00000467387 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
SPTA1-204ENST00000467387 RIOK3O14730 519 aaKnown RBP11.83□□□□□ -0.52
SPTA1-204ENST00000467387 GABBR2O75899 941 aa11.83□□□□□ -0.52
SPTA1-204ENST00000467387 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
SPTA1-204ENST00000467387 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
SPTA1-204ENST00000467387 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
SPTA1-204ENST00000467387 DEPDC5O75140 1603 aa11.82□□□□□ -0.52
SPTA1-204ENST00000467387 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
SPTA1-204ENST00000467387 RSPH4AQ5TD94 716 aa11.82□□□□□ -0.52
SPTA1-204ENST00000467387 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
SPTA1-204ENST00000467387 ARHGEF5Q12774 1597 aa11.82□□□□□ -0.52
SPTA1-204ENST00000467387 ABCC3O15438 1527 aa11.81□□□□□ -0.52
SPTA1-204ENST00000467387 SYNMO15061 1565 aa11.81□□□□□ -0.52
SPTA1-204ENST00000467387 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
SPTA1-204ENST00000467387 ZC3H13Q5T200 1668 aaKnown RBP11.81□□□□□ -0.52
SPTA1-204ENST00000467387 MED14O60244 1454 aa11.79□□□□□ -0.52
SPTA1-204ENST00000467387 ERVK-7P63135 1459 aa11.79□□□□□ -0.52
SPTA1-204ENST00000467387 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
SPTA1-204ENST00000467387 EIF2AK4Q9P2K8 1649 aaKnown RBP11.77□□□□□ -0.53
SPTA1-204ENST00000467387 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
SPTA1-204ENST00000467387 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
SPTA1-204ENST00000467387 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
SPTA1-204ENST00000467387 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
SPTA1-204ENST00000467387 VGFO15240 615 aaPredicted RBP11.75□□□□□ -0.53
SPTA1-204ENST00000467387 CEP152O94986 1710 aa11.74□□□□□ -0.53
SPTA1-204ENST00000467387 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
SPTA1-204ENST00000467387 LRRC9Q6ZRR7 1453 aa11.74□□□□□ -0.53
SPTA1-204ENST00000467387 VPS8Q8N3P4 1428 aa11.73□□□□□ -0.53
SPTA1-204ENST00000467387 STRCP1A6NGW2 1772 aa11.72□□□□□ -0.53
SPTA1-204ENST00000467387 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
SPTA1-204ENST00000467387 MROH1Q8NDA8 1641 aa11.72□□□□□ -0.53
SPTA1-204ENST00000467387 DUOX2Q9NRD8 1548 aa11.72□□□□□ -0.53
SPTA1-204ENST00000467387 EID1Q9Y6B2 187 aa11.72□□□□□ -0.53
SPTA1-204ENST00000467387 MYOM3Q5VTT5 1437 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 TIE1P35590 1138 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 PSEN1P49768 467 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
SPTA1-204ENST00000467387 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
SPTA1-204ENST00000467387 KANK1Q14678 1352 aa11.69□□□□□ -0.54
SPTA1-204ENST00000467387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
SPTA1-204ENST00000467387 ZFP91Q96JP5 570 aaPredicted RBP11.69□□□□□ -0.54
SPTA1-204ENST00000467387 SLIT1O75093 1534 aa11.69□□□□□ -0.54
SPTA1-204ENST00000467387 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
SPTA1-204ENST00000467387 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
SPTA1-204ENST00000467387 ARHGAP23Q9P227 1491 aa11.68□□□□□ -0.54
SPTA1-204ENST00000467387 CFAP65Q6ZU64 1925 aaKnown RBP11.67□□□□□ -0.54
SPTA1-204ENST00000467387 CROCC2H7BZ55 1655 aa11.67□□□□□ -0.54
SPTA1-204ENST00000467387 PIK3C2BO00750 1634 aa11.67□□□□□ -0.54
SPTA1-204ENST00000467387 EFCAB6Q5THR3 1501 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 LTKP29376 864 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 BCANQ96GW7 911 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 RRP7BPQ9NSQ0 103 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
SPTA1-204ENST00000467387 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
SPTA1-204ENST00000467387 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-204ENST00000467387 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
SPTA1-204ENST00000467387 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
SPTA1-204ENST00000467387 TMEM94Q12767 1356 aa11.65□□□□□ -0.55
SPTA1-204ENST00000467387 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.55
SPTA1-204ENST00000467387 MAP3K1Q13233 1512 aa11.64□□□□□ -0.55
SPTA1-204ENST00000467387 PTPN23Q9H3S7 1636 aa11.64□□□□□ -0.55
SPTA1-204ENST00000467387 STK25O00506 426 aa11.63□□□□□ -0.55
SPTA1-204ENST00000467387 ABCC5O15440 1437 aa11.62□□□□□ -0.55
SPTA1-204ENST00000467387 DAPK1P53355 1430 aa11.62□□□□□ -0.55
SPTA1-204ENST00000467387 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-204ENST00000467387 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
SPTA1-204ENST00000467387 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
SPTA1-204ENST00000467387 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms