RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 YEATS2Q9ULM3 1422 aa10.13□□□□□ -0.79
TPM3-214ENST00000466010 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
TPM3-214ENST00000466010 ABCC1P33527 1531 aa10.12□□□□□ -0.79
TPM3-214ENST00000466010 HECW2Q9P2P5 1572 aa10.11□□□□□ -0.79
TPM3-214ENST00000466010 KIAA1107Q9UPP5 1409 aa10.11□□□□□ -0.79
TPM3-214ENST00000466010 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
TPM3-214ENST00000466010 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
TPM3-214ENST00000466010 CCNB3Q8WWL7 1395 aa10.11□□□□□ -0.79
TPM3-214ENST00000466010 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 REREQ9P2R6 1566 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 AFAP1Q8N556 730 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 CFDP1Q9UEE9 299 aaPredicted RBP10.1□□□□□ -0.79
TPM3-214ENST00000466010 MYT1LQ9UL68 1186 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 EHBP1L1Q8N3D4 1523 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 GPATCH8Q9UKJ3 1502 aaKnown RBP10.1□□□□□ -0.79
TPM3-214ENST00000466010 MADDQ8WXG6 1647 aa10.1□□□□□ -0.79
TPM3-214ENST00000466010 ZNF316A6NFI3 1004 aaPredicted RBP10.09□□□□□ -0.79
TPM3-214ENST00000466010 PDIA6Q15084 440 aa10.09□□□□□ -0.79
TPM3-214ENST00000466010 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
TPM3-214ENST00000466010 DPYSL4O14531 572 aa10.08□□□□□ -0.8
TPM3-214ENST00000466010 FLIIQ13045 1269 aa10.08□□□□□ -0.8
TPM3-214ENST00000466010 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
TPM3-214ENST00000466010 ITSN2Q9NZM3 1697 aa10.07□□□□□ -0.8
TPM3-214ENST00000466010 ARID3AQ99856 593 aa10.07□□□□□ -0.8
TPM3-214ENST00000466010 AGLP35573 1532 aa10.07□□□□□ -0.8
TPM3-214ENST00000466010 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
TPM3-214ENST00000466010 MINK1Q8N4C8 1332 aaPredicted RBP10.07□□□□□ -0.8
TPM3-214ENST00000466010 TMEM106CQ9BVX2 250 aa10.06□□□□□ -0.8
TPM3-214ENST00000466010 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
TPM3-214ENST00000466010 VPS8Q8N3P4 1428 aa10.06□□□□□ -0.8
TPM3-214ENST00000466010 TRAPPC8Q9Y2L5 1435 aa10.06□□□□□ -0.8
TPM3-214ENST00000466010 SPAG9O60271 1321 aaKnown RBP10.06□□□□□ -0.8
TPM3-214ENST00000466010 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
TPM3-214ENST00000466010 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
TPM3-214ENST00000466010 FAM117AQ9C073 453 aa10.05□□□□□ -0.8
TPM3-214ENST00000466010 ESF1Q9H501 851 aaKnown RBP10.05□□□□□ -0.8
TPM3-214ENST00000466010 RIMS1Q86UR5 1692 aaKnown RBP10.05□□□□□ -0.8
TPM3-214ENST00000466010 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
TPM3-214ENST00000466010 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
TPM3-214ENST00000466010 SYCP2Q9BX26 1530 aa10.04□□□□□ -0.8
TPM3-214ENST00000466010 MLECQ14165 292 aa10.04□□□□□ -0.8
TPM3-214ENST00000466010 CNTLNQ9NXG0 1405 aa10.04□□□□□ -0.8
TPM3-214ENST00000466010 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
TPM3-214ENST00000466010 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
TPM3-214ENST00000466010 MAP2K5Q13163 448 aa10.03□□□□□ -0.8
TPM3-214ENST00000466010 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
TPM3-214ENST00000466010 SUPT6HQ7KZ85 1726 aaKnown RBP10.02□□□□□ -0.8
TPM3-214ENST00000466010 TIAM1Q13009 1591 aa10.02□□□□□ -0.81
TPM3-214ENST00000466010 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.81
TPM3-214ENST00000466010 ZRANB1Q9UGI0 708 aa10.02□□□□□ -0.81
TPM3-214ENST00000466010 LMTK3Q96Q04 1460 aa10.02□□□□□ -0.81
TPM3-214ENST00000466010 ATP7AQ04656 1500 aa10.02□□□□□ -0.81
TPM3-214ENST00000466010 SIGLEC1Q9BZZ2 1709 aa10.02□□□□□ -0.81
TPM3-214ENST00000466010 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
TPM3-214ENST00000466010 GPR37O15354 613 aa10.01□□□□□ -0.81
TPM3-214ENST00000466010 HNRNPMP52272 730 aaKnown RBP eCLIP10.01□□□□□ -0.81
TPM3-214ENST00000466010 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
TPM3-214ENST00000466010 NCOA2Q15596 1464 aa10.01□□□□□ -0.81
TPM3-214ENST00000466010 RTEL1-TNFRSF6BF6WH68 1400 aa10□□□□□ -0.81
TPM3-214ENST00000466010 LRRC9Q6ZRR7 1453 aa10□□□□□ -0.81
TPM3-214ENST00000466010 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
TPM3-214ENST00000466010 AMHR2Q16671 573 aa10□□□□□ -0.81
TPM3-214ENST00000466010 CCDC102AQ96A19 550 aa10□□□□□ -0.81
TPM3-214ENST00000466010 INO80Q9ULG1 1556 aaPredicted RBP10□□□□□ -0.81
TPM3-214ENST00000466010 NUTM2FA1L443 756 aa9.99□□□□□ -0.81
TPM3-214ENST00000466010 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
TPM3-214ENST00000466010 A2MP01023 1474 aa9.98□□□□□ -0.81
TPM3-214ENST00000466010 MBD5Q9P267 1494 aa9.98□□□□□ -0.81
TPM3-214ENST00000466010 APBB1O00213 710 aa9.98□□□□□ -0.81
TPM3-214ENST00000466010 UHRF1BP1Q6BDS2 1440 aa9.98□□□□□ -0.81
TPM3-214ENST00000466010 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
TPM3-214ENST00000466010 PLXNC1O60486 1568 aa9.97□□□□□ -0.81
TPM3-214ENST00000466010 DSG2Q14126 1118 aa9.97□□□□□ -0.81
TPM3-214ENST00000466010 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
TPM3-214ENST00000466010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.81
TPM3-214ENST00000466010 MIA2Q96PC5 1412 aa9.97□□□□□ -0.81
TPM3-214ENST00000466010 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
TPM3-214ENST00000466010 ADGBQ8N7X0 1667 aa9.96□□□□□ -0.81
TPM3-214ENST00000466010 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.81
TPM3-214ENST00000466010 PLEKHG3A1L390 1219 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 IRF6O14896 467 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 NPATQ14207 1427 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 ARHGEF5Q12774 1597 aa9.96□□□□□ -0.82
TPM3-214ENST00000466010 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
TPM3-214ENST00000466010 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
TPM3-214ENST00000466010 GNPATO15228 680 aa9.95□□□□□ -0.82
TPM3-214ENST00000466010 CD44P16070 742 aaKnown RBP9.95□□□□□ -0.82
TPM3-214ENST00000466010 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
TPM3-214ENST00000466010 ZNF644Q9H582 1327 aaPredicted RBP9.95□□□□□ -0.82
TPM3-214ENST00000466010 MROH2AA6NES4 1674 aa9.94□□□□□ -0.82
TPM3-214ENST00000466010 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
TPM3-214ENST00000466010 DHX29Q7Z478 1369 aaKnown RBP9.94□□□□□ -0.82
TPM3-214ENST00000466010 FOXK1P85037 733 aa9.94□□□□□ -0.82
TPM3-214ENST00000466010 HIC1Q14526 733 aa9.94□□□□□ -0.82
TPM3-214ENST00000466010 TTLL12Q14166 644 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms